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S27_BME27_1069154_prodigal-single.1__X__X__00317
Bact-VirS27_BME27_1069154_prodigal-single.1__X__X__00317
Identity
- Kingdom:
- phage
Quality
74.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-62
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.75 | 53.0 | 5.49e-01 | 75.5% | 94.0% |
| 2k2dA00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.70 | 46.0 | 4.82e-01 | 71.7% | 76.6% |
| 2ms3A00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.70 | 49.0 | 4.87e-01 | 75.5% | 100.0% |
| 2conA00 | 6.20.210.10 | Special › Other non-globular › Herpes Virus-1 › Nin one binding (NOB1), Zn-ribbon-like | 0.67 | 47.0 | 4.29e-01 | 94.3% | 53.2% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.66 | 46.0 | 4.80e-01 | 71.7% | 100.0% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.64 | 48.0 | 4.54e-01 | 83.0% | 71.2% |
| 4fmrB01 | 2.70.50.70 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › | 0.64 | 46.0 | 3.36e-01 | 77.4% | 40.3% |
| 3x27A01 | 2.40.100.20 | Mainly Beta › Beta Barrel › Cyclophilin › | 0.63 | 46.0 | 3.33e-01 | 77.4% | 93.9% |
| 3axsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 53.0 | 3.32e-01 | 98.1% | 25.2% |
| 2ayjA00 | 4.10.1060.50 | Few Secondary Structures › Irregular › ZNF265 like › | 0.63 | 43.0 | 4.22e-01 | 71.7% | 69.6% |
| 4aybP00 | 2.20.28.30 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase ii, chain L | 0.61 | 41.0 | 4.38e-01 | 75.5% | 84.1% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 47.0 | 4.03e-01 | 84.9% | 52.3% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 44.0 | 3.67e-01 | 83.0% | 44.2% |
| 8h68A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.60 | 45.0 | 2.99e-01 | 81.1% | 19.5% |
| 4oj8B00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.60 | 34.0 | 2.20e-01 | 96.2% | 10.3% |
| 2xy1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 41.0 | 3.45e-01 | 77.4% | 56.7% |
| 4dipH00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.58 | 41.0 | 3.27e-01 | 75.5% | 68.9% |
| 3jr7A02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.56 | 38.0 | 4.32e-01 | 71.7% | 100.0% |
| 2yhoE00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 40.0 | 3.83e-01 | 86.8% | 67.1% |
| 3tk9A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 38.0 | 3.24e-01 | 79.2% | 86.0% |
| 6cngA02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.54 | 36.0 | 4.07e-01 | 71.7% | 100.0% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 40.0 | 3.95e-01 | 98.1% | 78.0% |
| 7o85C01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 36.0 | 3.27e-01 | 71.7% | 81.8% |
| 1gn4A02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.53 | 39.0 | 3.20e-01 | 84.9% | 49.6% |
| 3fdjA02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.53 | 36.0 | 4.00e-01 | 71.7% | 100.0% |
| 3rt3B01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 36.0 | 3.33e-01 | 73.6% | 88.0% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.53 | 44.0 | 3.91e-01 | 100.0% | 100.0% |
| 1nepA00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 39.0 | 3.04e-01 | 83.0% | 48.5% |
| 1orfA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 36.0 | 3.10e-01 | 79.2% | 85.7% |
| 3govB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 37.0 | 2.94e-01 | 79.2% | 77.2% |
| 4x9xA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 38.0 | 2.85e-01 | 84.9% | 30.2% |
| 1m0wB05 | 3.30.1490.50 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Glutathione synthase lid domain | 0.50 | 34.0 | 3.33e-01 | 71.7% | 65.0% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4666101 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.83 | 55.0 | 5.94e-01 | 71.7% | 80.0% |
| 4980022 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 55.0 | 5.69e-01 | 71.7% | 76.0% |
| 3277720 | 375.1.1.185 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 | 0.79 | 54.0 | 6.10e-01 | 71.7% | 97.5% |
| 4084473 | 375.1.1.8 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HypA | 0.77 | 53.0 | 5.69e-01 | 73.6% | 84.4% |
| 4931282 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 52.0 | 5.77e-01 | 71.7% | 95.0% |
| 5052663 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 52.0 | 5.88e-01 | 71.7% | 95.0% |
| 4929321 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 54.0 | 5.27e-01 | 79.2% | 70.0% |
| 5071799 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 51.0 | 4.23e-01 | 71.7% | 42.2% |
| 4928962 | 375.5.1.0 ↗ | few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like | 0.74 | 54.0 | 5.19e-01 | 79.2% | 71.7% |
| 4028011 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 50.0 | 5.35e-01 | 71.7% | 95.6% |
| 4943704 | 375.12.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nicotinate phosphoribosyltransferase C-terminal domain-related › Nicotinate phosphoribosyltransferase C-terminal domain-related | 0.73 | 49.0 | 4.58e-01 | 71.7% | 56.9% |
| 5004620 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 50.0 | 5.69e-01 | 77.4% | 97.5% |
| 4975923 | 101.1.2.205 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF0610-like_N | 0.72 | 51.0 | 4.24e-01 | 75.5% | 42.1% |
| 5048049 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 48.0 | 5.35e-01 | 71.7% | 92.5% |
| 3388528 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.71 | 49.0 | 5.26e-01 | 77.4% | 97.5% |
| 3433661 | 375.1.1.51 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_9 | 0.69 | 48.0 | 5.37e-01 | 77.4% | 97.5% |
| 3622513 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.69 | 51.0 | 4.93e-01 | 81.1% | 100.0% |
| 3620613 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 48.0 | 5.18e-01 | 75.5% | 95.6% |
| 4230934 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.68 | 60.0 | 3.59e-01 | 100.0% | 21.3% |
| 4953501 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 47.0 | 5.15e-01 | 75.5% | 100.0% |
| 3462740 | 375.1.1.51 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_9 | 0.67 | 46.0 | 5.18e-01 | 71.7% | 95.0% |
| 5072403 | 375.5.1.0 ↗ | few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like | 0.67 | 47.0 | 4.91e-01 | 84.9% | 88.9% |
| 4940302 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.66 | 57.0 | 3.47e-01 | 100.0% | 35.3% |
| 3341146 | 375.1.1.51 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_9 | 0.65 | 47.0 | 4.13e-01 | 77.4% | 51.2% |
| 3240213 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.65 | 46.0 | 4.23e-01 | 75.5% | 57.1% |
| 5026537 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.64 | 55.0 | 3.36e-01 | 100.0% | 20.5% |
| 4338085 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 42.0 | 4.45e-01 | 71.7% | 82.2% |
| 3430951 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.62 | 42.0 | 3.69e-01 | 83.0% | 44.3% |
| 4546356 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 41.0 | 3.54e-01 | 71.7% | 43.5% |
| 3604213 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.61 | 41.0 | 4.49e-01 | 71.7% | 92.5% |
| 4467359 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.61 | 41.0 | 2.91e-01 | 71.7% | 21.8% |
| 6172 | 221.1.1.73 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RASSF8-10_RA | 0.60 | 44.0 | 3.82e-01 | 83.0% | 50.0% |
| 4206080 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.60 | 50.0 | 3.13e-01 | 100.0% | 28.1% |
| 5000735 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 42.0 | 2.96e-01 | 77.4% | 22.9% |
| 3627032 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.59 | 43.0 | 4.27e-01 | 100.0% | 80.0% |
| 3415761 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.59 | 44.0 | 4.48e-01 | 83.0% | 90.0% |
| 4938827 | 101.1.9.83 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM | 0.59 | 50.0 | 4.13e-01 | 98.1% | 86.9% |
| 4836960 | 375.5.1.1 ↗ | few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like › NOB1_Zn_bind | 0.58 | 47.0 | 4.34e-01 | 100.0% | 67.6% |
| 5015962 | 375.1.1.64 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX | 0.58 | 45.0 | 4.58e-01 | 100.0% | 98.0% |
| 4466102 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.58 | 41.0 | 2.99e-01 | 88.7% | 24.7% |
| 4456198 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 41.0 | 2.85e-01 | 77.4% | 22.2% |
| 4329890 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.57 | 41.0 | 3.07e-01 | 84.9% | 28.7% |
| 5042462 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.57 | 41.0 | 2.92e-01 | 77.4% | 24.8% |
| 3822895 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.57 | 40.0 | 3.90e-01 | 92.5% | 65.1% |
| 4246886 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 40.0 | 4.05e-01 | 88.7% | 76.4% |
| 5051531 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 41.0 | 4.63e-01 | 77.4% | 100.0% |
| 3540501 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.55 | 38.0 | 3.72e-01 | 79.2% | 65.0% |
| 4507638 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.55 | 40.0 | 2.93e-01 | 84.9% | 26.1% |
| 3598173 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 39.0 | 3.95e-01 | 100.0% | 76.4% |
| 4344487 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.55 | 39.0 | 2.91e-01 | 84.9% | 26.1% |
| 5024279 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 40.0 | 4.16e-01 | 100.0% | 100.0% |
| 4645846 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.54 | 40.0 | 2.97e-01 | 86.8% | 27.1% |
| 4886797 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.54 | 40.0 | 3.65e-01 | 88.7% | 57.1% |
| 4310017 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.54 | 39.0 | 4.13e-01 | 100.0% | 95.6% |
| 3799493 | 109.4.1.801 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › zf-C3HC4_3 | 0.53 | 38.0 | 2.43e-01 | 100.0% | 12.3% |
| 4403519 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 39.0 | 2.85e-01 | 86.8% | 26.5% |
| 3170465 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.53 | 43.0 | 3.98e-01 | 100.0% | 70.0% |
| 4616533 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.53 | 44.0 | 3.02e-01 | 98.1% | 36.7% |
| 3834872 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.52 | 36.0 | 2.85e-01 | 77.4% | 48.9% |
| 4945087 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 37.0 | 3.10e-01 | 84.9% | 77.1% |