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S27_BME27_1069154_prodigal-single.1__X__X__00361

Bact-Vir

S27_BME27_1069154_prodigal-single.1__X__X__00361

Identity

Kingdom:
phage

Quality

77.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-66
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sseB00 1.10.238.100 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › YAP1 redox domain. Chain B 0.65 43.0 3.58e-01 70.2% 68.6%
4n06A02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.55 46.0 2.94e-01 100.0% 21.6%
2zxqA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 40.0 2.46e-01 97.9% 13.2%
2fsjA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 36.0 2.70e-01 74.5% 54.3%
1fpwA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 37.0 3.08e-01 80.9% 69.7%
D2 high residues 317-439
PDB
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.79 69.0 7.18e-01 99.2% 100.0%
3isrA02 2.60.40.2250 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 43.0 4.68e-01 100.0% 77.0%
4fx5A01 2.60.40.3670 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 42.0 4.06e-01 100.0% 54.2%
3bpsA02 2.60.120.690 Mainly Beta › Sandwich › Jelly Rolls › Proprotein convertase subtilisin/kexin type 9 0.67 43.0 4.03e-01 100.0% 52.7%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 45.0 4.86e-01 100.0% 84.2%
5j7mA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 42.0 4.22e-01 100.0% 64.8%
3v10A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 47.0 4.42e-01 100.0% 63.7%
3afgA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.64 49.0 5.31e-01 98.4% 96.1%
3hwjA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.63 45.0 4.20e-01 100.0% 59.7%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.62 48.0 3.77e-01 80.5% 99.6%
1nqjB00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.61 45.0 4.69e-01 95.9% 83.3%
3l81A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.61 39.0 4.12e-01 100.0% 71.8%
2h6oA01 2.60.40.2800 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 53.0 5.05e-01 97.6% 85.2%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.60 44.0 4.22e-01 78.0% 100.0%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.60 45.0 4.86e-01 95.1% 92.3%
4indA03 2.60.120.1330 Mainly Beta › Sandwich › Jelly Rolls › 0.59 49.0 4.99e-01 100.0% 92.4%
1ohfA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 53.0 3.98e-01 100.0% 90.2%
1hn0A04 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.58 34.0 3.50e-01 100.0% 59.0%
1te5A00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.57 38.0 2.99e-01 95.9% 32.0%
1e54A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.57 44.0 3.20e-01 86.2% 29.9%
4ca9A00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.57 41.0 4.52e-01 100.0% 92.9%
2c9jA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.57 48.0 3.97e-01 89.4% 59.2%
1gqgC02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 38.0 3.30e-01 99.2% 44.4%
1e5bA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 39.0 4.46e-01 99.2% 98.9%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 50.0 4.37e-01 100.0% 89.4%
3sybA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.55 47.0 3.24e-01 90.2% 98.3%
2pslA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.55 45.0 3.72e-01 87.0% 55.8%
7q61A01 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 40.0 4.19e-01 100.0% 85.3%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 49.0 4.36e-01 100.0% 89.3%
3bk5A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 42.0 3.46e-01 83.7% 89.4%
7altB01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 41.0 3.76e-01 79.7% 67.1%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 49.0 4.36e-01 100.0% 89.7%
4ojdH01 2.60.98.60 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 0.54 45.0 4.10e-01 91.1% 95.7%
3hrdB01 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.53 40.0 3.62e-01 78.0% 97.0%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.53 39.0 2.81e-01 74.8% 35.7%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.53 43.0 3.15e-01 87.0% 98.0%
1lshA01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.53 40.0 3.20e-01 80.5% 92.8%
1ffvB04 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.53 40.0 3.40e-01 78.0% 83.8%
2hdiA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.53 38.0 2.51e-01 72.4% 21.0%
4jpqA00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 47.0 3.90e-01 99.2% 66.7%
1gnyA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 47.0 4.41e-01 100.0% 97.4%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 48.0 4.12e-01 100.0% 98.4%
4d8oA03 2.60.40.2660 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 34.0 3.38e-01 75.6% 62.7%
3jciA00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.52 47.0 4.11e-01 100.0% 94.7%
1umzA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 3.64e-01 100.0% 75.7%
4xl1E01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 36.0 3.36e-01 70.7% 67.7%
5axgA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 38.0 3.83e-01 95.1% 75.4%
5j09A00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.51 46.0 4.16e-01 100.0% 98.2%
4mloA01 2.60.120.810 Mainly Beta › Sandwich › Jelly Rolls › 0.51 36.0 3.30e-01 100.0% 55.3%
3cu7A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 4.40e-01 99.2% 96.5%
5mw5A01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 38.0 3.63e-01 79.7% 69.5%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 3.57e-01 100.0% 69.2%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 3.92e-01 100.0% 98.5%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.51 38.0 2.96e-01 77.2% 99.2%
1w2tA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.51 42.0 4.08e-01 96.7% 81.3%
6i7sG01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.51 38.0 3.06e-01 79.7% 89.8%
1hx6A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 45.0 4.35e-01 99.2% 90.1%
5jpnB04 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.50 41.0 4.15e-01 99.2% 90.9%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2512673 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.80 62.0 6.16e-01 100.0% 78.6%
3495353 221.13.1.1 a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain › DUF4140 0.69 43.0 4.10e-01 100.0% 54.3%
2491354 4182.1.1.3 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C 0.69 43.0 4.77e-01 98.4% 80.2%
2581320 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 60.0 6.02e-01 99.2% 95.2%
4927137 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.66 38.0 4.25e-01 95.9% 72.6%
5013259 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 53.0 5.34e-01 100.0% 84.0%
5056380 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.65 36.0 3.88e-01 95.9% 62.9%
4937593 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.64 50.0 4.05e-01 80.5% 93.1%
4075543 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.64 50.0 3.71e-01 82.1% 98.7%
5023489 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 48.0 5.07e-01 95.1% 90.9%
3387574 5084.3.1.0 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.62 53.0 3.93e-01 91.9% 96.8%
4347483 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.62 53.0 3.78e-01 91.9% 86.5%
3796384 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.62 49.0 4.89e-01 100.0% 82.4%
4162922 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.61 52.0 3.88e-01 91.9% 95.8%
5046630 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 51.0 5.27e-01 100.0% 93.0%
5063656 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 54.0 5.56e-01 100.0% 98.3%
1165730 10.20.1.1 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N_2 0.61 40.0 4.30e-01 100.0% 80.2%
2771922 12.2.1.1 beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Lyase_8_C 0.60 34.0 3.52e-01 97.6% 56.7%
5020631 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 46.0 4.24e-01 100.0% 61.9%
None 0.60 44.0 4.22e-01 78.0% 100.0%
5010649 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 41.0 4.75e-01 99.2% 100.0%
5063640 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 42.0 4.76e-01 95.9% 100.0%
5036836 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.59 46.0 3.74e-01 82.9% 89.1%
4944742 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 41.0 4.09e-01 87.0% 69.2%
4992294 10.1.1.117 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Thermopsin 0.58 52.0 4.16e-01 100.0% 74.8%
3650799 11.2.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 0.58 44.0 4.23e-01 79.7% 74.1%
3386238 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 48.0 3.62e-01 91.9% 95.6%
3599907 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 53.0 5.22e-01 98.4% 98.5%
3473803 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 41.0 3.52e-01 75.6% 95.6%
4991389 10.1.1.117 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Thermopsin 0.56 50.0 3.91e-01 100.0% 75.5%
5015520 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.56 43.0 3.61e-01 81.3% 89.5%
5032655 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.16e-01 97.6% 79.0%
3974176 5084.8.1.0 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore 0.56 40.0 2.72e-01 89.4% 20.4%
4620910 10.32.1.183 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM87A-B_GOLD 0.55 49.0 4.59e-01 100.0% 98.1%
4966157 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 45.0 3.94e-01 89.4% 92.1%
4646283 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.55 40.0 2.69e-01 89.4% 20.7%
4291120 10.21.1.1 beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.55 49.0 4.79e-01 100.0% 88.1%
4281349 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.55 39.0 2.64e-01 89.4% 20.9%
3946102 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.54 38.0 2.57e-01 78.0% 20.7%
5077191 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 41.0 4.47e-01 99.2% 100.0%
3792868 11.1.5.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7808 0.54 44.0 4.45e-01 100.0% 86.3%
3952750 10.20.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.54 37.0 4.06e-01 92.7% 87.0%
4966023 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.53 48.0 4.79e-01 100.0% 98.4%
4969783 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.53 41.0 3.05e-01 80.5% 97.7%
4349091 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.53 37.0 2.60e-01 88.6% 21.2%
5033918 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.53 47.0 4.18e-01 98.4% 97.8%
3608754 10.1.1.56 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.53 48.0 3.91e-01 99.2% 86.2%
3393352 385.1.1.1 few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › Cys_knot 0.52 38.0 3.89e-01 76.4% 98.3%
3212564 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.52 38.0 3.62e-01 78.0% 94.7%
4948088 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 46.0 4.10e-01 100.0% 82.3%
3221888 10.32.1.218 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 0.51 42.0 4.30e-01 100.0% 91.9%
3849839 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.51 37.0 4.02e-01 75.6% 100.0%
3840004 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.50 46.0 3.82e-01 100.0% 98.6%
3976823 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.50 38.0 2.59e-01 78.0% 23.8%