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S27_BME27_1069154_prodigal-single.1__X__X__00551
Bact-VirS27_BME27_1069154_prodigal-single.1__X__X__00551
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 40-112
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3j7yD01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 41.0 | 3.65e-01 | 74.0% | 42.5% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.66 | 53.0 | 5.32e-01 | 97.3% | 89.2% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 37.0 | 3.97e-01 | 72.6% | 67.7% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.61 | 51.0 | 4.51e-01 | 91.8% | 98.1% |
| 3o2zP00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 52.0 | 4.55e-01 | 100.0% | 70.7% |
| 1o5yA00 | 3.10.690.10 | Alpha Beta › Roll › Bifunctional nuclease domain › Bifunctional nuclease domain | 0.61 | 49.0 | 4.00e-01 | 90.4% | 90.2% |
| 1gm5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 53.0 | 4.78e-01 | 100.0% | 78.4% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.61 | 42.0 | 4.31e-01 | 87.7% | 79.1% |
| 2c9oB02 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.60 | 53.0 | 4.61e-01 | 98.6% | 80.5% |
| 2rajA02 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.60 | 51.0 | 4.34e-01 | 98.6% | 96.8% |
| 4p78C00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.59 | 42.0 | 4.40e-01 | 97.3% | 81.8% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.59 | 47.0 | 4.14e-01 | 87.7% | 95.5% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 39.0 | 3.90e-01 | 71.2% | 68.0% |
| 2i5hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 48.0 | 4.89e-01 | 90.4% | 95.8% |
| 3amuA02 | 2.40.50.1010 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 47.0 | 3.95e-01 | 100.0% | 82.4% |
| 4wi1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.54 | 38.0 | 3.20e-01 | 72.6% | 82.1% |
| 3u4zA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 45.0 | 4.01e-01 | 95.9% | 67.0% |
| 2rqxA00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 40.0 | 3.97e-01 | 100.0% | 75.3% |
| 3oa4A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 37.0 | 3.02e-01 | 89.0% | 40.6% |
| 1r0mA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 45.0 | 3.81e-01 | 100.0% | 63.1% |
| 4fg9A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 39.0 | 3.86e-01 | 95.9% | 77.2% |
| 4hn7A00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 42.0 | 3.98e-01 | 90.4% | 82.4% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4173773 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.73 | 49.0 | 4.67e-01 | 78.1% | 59.5% |
| 3987601 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 42.0 | 4.84e-01 | 94.5% | 82.0% |
| 3190369 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.71 | 43.0 | 3.82e-01 | 72.6% | 42.9% |
| 4974065 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.70 | 45.0 | 4.94e-01 | 94.5% | 80.0% |
| 4519674 | 4.1.1.186 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5397 | 0.70 | 43.0 | 4.68e-01 | 72.6% | 75.9% |
| 4851967 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.68 | 42.0 | 4.57e-01 | 95.9% | 74.2% |
| 3838288 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 60.0 | 5.16e-01 | 100.0% | 69.6% |
| 3384331 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 55.0 | 5.28e-01 | 93.2% | 82.4% |
| 4930470 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.64 | 43.0 | 4.16e-01 | 78.1% | 60.0% |
| 4882592 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.63 | 54.0 | 4.39e-01 | 98.6% | 58.2% |
| 5028505 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.63 | 53.0 | 4.41e-01 | 98.6% | 60.7% |
| 4459163 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.62 | 42.0 | 3.58e-01 | 80.8% | 41.6% |
| 1245251 | 2.1.1.32 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TIP49 | 0.60 | 53.0 | 4.70e-01 | 98.6% | 85.0% |
| 3927894 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 48.0 | 4.00e-01 | 89.0% | 79.3% |
| 3774525 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 51.0 | 3.94e-01 | 98.6% | 69.4% |
| 3909653 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 51.0 | 4.12e-01 | 98.6% | 82.7% |
| 3509606 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 49.0 | 3.57e-01 | 89.0% | 53.8% |
| 3902096 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 50.0 | 4.06e-01 | 98.6% | 79.4% |
| 4945791 | 2.1.1.287 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Zn_ribbon_TiaS | 0.59 | 53.0 | 4.50e-01 | 100.0% | 84.2% |
| 3839111 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 51.0 | 4.83e-01 | 97.3% | 82.2% |
| 4641867 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.59 | 51.0 | 4.06e-01 | 100.0% | 78.8% |
| 5009170 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 46.0 | 4.62e-01 | 97.3% | 85.3% |
| 5021659 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.59 | 50.0 | 4.73e-01 | 95.9% | 81.1% |
| 5051933 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 45.0 | 3.51e-01 | 97.3% | 37.1% |
| 4514268 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.58 | 40.0 | 3.86e-01 | 79.5% | 60.7% |
| 3262159 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.58 | 50.0 | 4.18e-01 | 98.6% | 91.5% |
| 4974627 | 2.1.1.287 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Zn_ribbon_TiaS | 0.58 | 50.0 | 3.87e-01 | 100.0% | 86.7% |
| 5041307 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 44.0 | 3.09e-01 | 97.3% | 23.8% |
| 3598925 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.58 | 47.0 | 3.92e-01 | 90.4% | 82.3% |
| 4948574 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.57 | 46.0 | 2.91e-01 | 94.5% | 16.0% |
| 4943785 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 49.0 | 4.01e-01 | 97.3% | 52.9% |
| 4486857 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.57 | 49.0 | 4.09e-01 | 98.6% | 88.1% |
| 4995609 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 48.0 | 3.91e-01 | 95.9% | 54.5% |
| 591 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.57 | 39.0 | 3.89e-01 | 71.2% | 68.4% |
| 3738467 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.57 | 48.0 | 4.02e-01 | 98.6% | 87.1% |
| 4575597 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.57 | 50.0 | 4.17e-01 | 100.0% | 80.0% |
| 4985545 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.57 | 49.0 | 4.53e-01 | 97.3% | 78.7% |
| 3893735 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.56 | 48.0 | 4.23e-01 | 100.0% | 90.4% |
| 4396772 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.56 | 47.0 | 3.81e-01 | 98.6% | 86.7% |
| 3930705 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.55 | 48.0 | 4.28e-01 | 94.5% | 71.0% |
| 3783181 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.55 | 44.0 | 3.93e-01 | 90.4% | 93.6% |
| 3284535 | 295.1.1.13 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3090 | 0.55 | 46.0 | 3.91e-01 | 93.2% | 82.5% |
| 3227986 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 45.0 | 4.47e-01 | 95.9% | 86.3% |
| 4987494 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.55 | 46.0 | 4.34e-01 | 100.0% | 78.9% |
| 5003597 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.54 | 44.0 | 4.21e-01 | 95.9% | 81.1% |
| 4993338 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.54 | 45.0 | 4.23e-01 | 97.3% | 74.7% |
| 165434 | 3816.1.1.1 ↗ | beta barrels › Polymyxin B resistance protein › Polymyxin B resistance protein › Polymyxin B resistance protein › PmrD | 0.54 | 40.0 | 3.85e-01 | 97.3% | 68.2% |
| 4966388 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.54 | 44.0 | 4.31e-01 | 97.3% | 87.1% |
| 3725926 | 2.1.1.94 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TLP1_add_C | 0.54 | 45.0 | 4.30e-01 | 93.2% | 83.5% |
| 3719349 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 41.0 | 2.59e-01 | 87.7% | 26.6% |
| 3301450 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.50 | 41.0 | 3.03e-01 | 89.0% | 72.6% |