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S27_BME27_1069154_prodigal-single.1__X__X__00571
Bact-VirS27_BME27_1069154_prodigal-single.1__X__X__00571
Identity
- Kingdom:
- phage
Quality
95.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-66
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 42.0 | 3.81e-01 | 89.1% | 44.7% |
| 5znqA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 41.0 | 2.85e-01 | 90.9% | 19.1% |
| 4qxdA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.65 | 52.0 | 3.91e-01 | 94.5% | 39.2% |
| 1vyiA00 | 1.20.120.820 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphoprotein, C-terminal domain | 0.63 | 50.0 | 3.99e-01 | 87.3% | 96.4% |
| 2nrjA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.61 | 50.0 | 3.08e-01 | 90.9% | 15.8% |
| 7d3uC01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 51.0 | 4.15e-01 | 94.5% | 52.3% |
| 4l80D00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.60 | 46.0 | 2.78e-01 | 83.6% | 13.4% |
| 2mh9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 47.0 | 3.63e-01 | 89.1% | 55.1% |
| 5eupA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.59 | 42.0 | 3.42e-01 | 80.0% | 36.7% |
| 2i0zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 41.0 | 2.63e-01 | 72.7% | 71.2% |
| 1rkbA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 39.0 | 2.72e-01 | 70.9% | 90.8% |
| 2e1mA05 | 1.10.405.10 | Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 | 0.57 | 46.0 | 3.88e-01 | 87.3% | 71.4% |
| 8f2lE01 | 1.10.1740.110 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.57 | 49.0 | 4.10e-01 | 100.0% | 83.8% |
| 1e1hB01 | 1.20.58.540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 48.0 | 3.94e-01 | 94.5% | 71.8% |
| 2b61A02 | 1.10.1740.110 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.57 | 50.0 | 4.06e-01 | 100.0% | 77.9% |
| 1g0hA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.56 | 47.0 | 3.62e-01 | 100.0% | 40.9% |
| 1c0gA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.55 | 39.0 | 3.38e-01 | 76.4% | 53.3% |
| 4clfA02 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.55 | 47.0 | 3.30e-01 | 98.2% | 68.5% |
| 3hwcA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 48.0 | 3.23e-01 | 100.0% | 34.8% |
| 1f02T00 | 4.10.820.10 | Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain | 0.54 | 43.0 | 4.10e-01 | 92.7% | 75.8% |
| 7cr6D02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.53 | 40.0 | 2.74e-01 | 83.6% | 23.5% |
| 2af6A01 | 3.30.70.3180 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 38.0 | 3.00e-01 | 81.8% | 77.1% |
| 4r2yC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 35.0 | 3.38e-01 | 70.9% | 73.8% |
| 7qjnA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 43.0 | 2.85e-01 | 100.0% | 50.2% |
| 2qxfA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 40.0 | 2.76e-01 | 85.5% | 99.5% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3508781 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.76 | 45.0 | 3.77e-01 | 76.4% | 36.7% |
| 5000602 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.71 | 55.0 | 4.01e-01 | 100.0% | 30.3% |
| 1392922 | 4018.1.1.1 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › FBPase | 0.70 | 59.0 | 4.07e-01 | 100.0% | 27.2% |
| 3178624 | 101.1.1.10 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ARID | 0.66 | 40.0 | 2.99e-01 | 94.5% | 25.4% |
| 3164272 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.66 | 55.0 | 4.06e-01 | 94.5% | 43.3% |
| 4956903 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.66 | 54.0 | 4.09e-01 | 100.0% | 37.1% |
| 4025072 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.65 | 44.0 | 3.47e-01 | 70.9% | 73.9% |
| 3381295 | 4018.1.1.1 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › FBPase | 0.65 | 55.0 | 4.16e-01 | 98.2% | 38.6% |
| 3610595 | 3131.1.1.3 ↗ | a+b two layers › FYR domain › FYR domain › FYR domain › FYRC | 0.64 | 36.0 | 2.70e-01 | 85.5% | 21.0% |
| 3411883 | 604.1.1.63 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 | 0.63 | 50.0 | 3.81e-01 | 83.6% | 68.3% |
| 5046117 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.63 | 53.0 | 3.96e-01 | 100.0% | 36.6% |
| 4655939 | 4018.1.1.1 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › FBPase | 0.63 | 53.0 | 3.93e-01 | 100.0% | 34.4% |
| 4114041 | 4018.1.1.1 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › FBPase | 0.62 | 51.0 | 3.56e-01 | 98.2% | 40.0% |
| 4986929 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.61 | 52.0 | 3.89e-01 | 100.0% | 37.2% |
| 4929567 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.61 | 50.0 | 3.76e-01 | 92.7% | 50.3% |
| 3386423 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.61 | 50.0 | 3.85e-01 | 96.4% | 42.9% |
| 4942517 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.61 | 52.0 | 3.91e-01 | 100.0% | 37.9% |
| 3405516 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.60 | 51.0 | 3.37e-01 | 100.0% | 66.3% |
| 4937551 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.60 | 51.0 | 3.53e-01 | 98.2% | 36.0% |
| 3361510 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.60 | 47.0 | 4.10e-01 | 94.5% | 55.6% |
| 3622196 | 604.1.1.63 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 | 0.59 | 45.0 | 3.47e-01 | 81.8% | 38.3% |
| 4260239 | 4018.1.1.1 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › FBPase | 0.59 | 49.0 | 3.51e-01 | 100.0% | 31.4% |
| 3330076 | 540.1.1.1 ↗ | few secondary structure elements › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › COX6B | 0.59 | 48.0 | 3.93e-01 | 89.1% | 50.5% |
| 3655694 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.58 | 48.0 | 4.10e-01 | 89.1% | 60.0% |
| 5013251 | 3291.1.1.195 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › H-kinase_dim | 0.58 | 46.0 | 3.44e-01 | 87.3% | 36.4% |
| 3879758 | 192.29.1.50 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PTPLA | 0.58 | 48.0 | 3.25e-01 | 94.5% | 25.2% |
| 2393002 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 50.0 | 3.34e-01 | 98.2% | 70.2% |
| 4192750 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.57 | 47.0 | 3.48e-01 | 96.4% | 85.6% |
| 3988787 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.56 | 48.0 | 4.29e-01 | 92.7% | 78.7% |
| 3988603 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.56 | 44.0 | 3.81e-01 | 85.5% | 68.2% |
| 3949890 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 46.0 | 3.26e-01 | 92.7% | 64.0% |
| 3871595 | 109.4.1.143 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ric8 | 0.55 | 48.0 | 2.76e-01 | 98.2% | 15.8% |
| 3723178 | 192.8.1.35 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF6594 | 0.55 | 45.0 | 3.83e-01 | 90.9% | 65.6% |
| 3506798 | 7015.1.1.7 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › PTPLA | 0.55 | 47.0 | 3.36e-01 | 100.0% | 44.6% |
| 4661496 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.55 | 47.0 | 2.73e-01 | 100.0% | 14.2% |
| 5051639 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.54 | 46.0 | 3.21e-01 | 100.0% | 39.0% |
| 4015831 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.54 | 39.0 | 3.92e-01 | 100.0% | 75.9% |
| 3242500 | 601.3.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › PTPLA | 0.53 | 44.0 | 3.04e-01 | 98.2% | 56.2% |
| 3781876 | 386.1.1.296 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4, zf-C2H2_6 | 0.53 | 37.0 | 3.71e-01 | 72.7% | 74.5% |
| 3620358 | 192.29.1.50 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PTPLA | 0.53 | 44.0 | 3.01e-01 | 98.2% | 52.3% |
| 3594098 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.53 | 43.0 | 2.96e-01 | 96.4% | 53.2% |
| 3985490 | 192.2.1.5 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF4376 | 0.53 | 44.0 | 3.49e-01 | 98.2% | 89.5% |
| 3268551 | 5054.1.1.71 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › PTPLA | 0.52 | 45.0 | 3.12e-01 | 100.0% | 35.8% |
| 4227027 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 40.0 | 3.48e-01 | 94.5% | 95.0% |
| 3438866 | 4351.1.1.1 ↗ | alpha arrays › ATP12-like › ATP12-like › ATP12-like › ATP12 | 0.51 | 40.0 | 2.67e-01 | 96.4% | 19.6% |
| 3544534 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 42.0 | 3.79e-01 | 96.4% | 80.0% |
| 3658936 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 41.0 | 3.01e-01 | 100.0% | 32.8% |
| 3818617 | 376.1.1.103 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_Vps41 | 0.50 | 33.0 | 3.36e-01 | 70.9% | 69.1% |