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S27_BME27_629333_prodigal-single.1__X__X__00031
Bact-VirS27_BME27_629333_prodigal-single.1__X__X__00031
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-38
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2conA00 | 6.20.210.10 | Special › Other non-globular › Herpes Virus-1 › Nin one binding (NOB1), Zn-ribbon-like | 0.67 | 46.0 | 3.82e-01 | 78.4% | 60.8% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 44.0 | 2.60e-01 | 81.1% | 8.5% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 50.0 | 3.89e-01 | 100.0% | 67.0% |
| 5z8lA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.58 | 42.0 | 3.08e-01 | 83.8% | 32.8% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 42.0 | 3.02e-01 | 83.8% | 35.9% |
| 7x4qA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.55 | 40.0 | 2.85e-01 | 91.9% | 79.5% |
| 2pm6D01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 39.0 | 2.40e-01 | 81.1% | 24.3% |
| 2w20B01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.54 | 41.0 | 2.42e-01 | 83.8% | 28.5% |
| 7b9cA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 39.0 | 2.35e-01 | 89.2% | 20.7% |
| 3pijA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 40.0 | 2.36e-01 | 86.5% | 12.3% |
| 3vg8A00 | 3.30.200.270 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.54 | 41.0 | 3.11e-01 | 89.2% | 72.4% |
| 6fnnB01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 38.0 | 2.71e-01 | 83.8% | 100.0% |
| 2mm0A00 | 2.10.70.110 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.53 | 37.0 | 3.30e-01 | 83.8% | 46.9% |
| 1aorA02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.53 | 40.0 | 2.72e-01 | 100.0% | 38.2% |
| 1ykdB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.52 | 38.0 | 2.61e-01 | 97.3% | 53.5% |
| 4ydsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 36.0 | 2.43e-01 | 91.9% | 18.1% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 36.0 | 2.23e-01 | 89.2% | 69.2% |
| 4oonA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 40.0 | 3.08e-01 | 97.3% | 96.2% |
| 3qokA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.50 | 37.0 | 3.03e-01 | 97.3% | 96.9% |
| 1e3hA01 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.50 | 37.0 | 2.43e-01 | 91.9% | 40.7% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4382028 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 37.0 | 3.62e-01 | 100.0% | 45.0% |
| 3500548 | 375.5.1.1 ↗ | few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like › NOB1_Zn_bind | 0.62 | 43.0 | 3.90e-01 | 81.1% | 83.3% |
| 3963647 | 2.8.1.0 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C | 0.58 | 43.0 | 3.54e-01 | 86.5% | 77.3% |
| 3979962 | 9.1.1.69 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › BigA_N | 0.56 | 41.0 | 3.25e-01 | 81.1% | 38.8% |
| 3411952 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.54 | 39.0 | 2.43e-01 | 86.5% | 85.1% |
| 3931799 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.54 | 38.0 | 3.75e-01 | 83.8% | 75.6% |
| 3718563 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.53 | 38.0 | 3.50e-01 | 89.2% | 85.0% |
| 4624358 | 6.1.1.2 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Kunitz_legume | 0.53 | 39.0 | 2.71e-01 | 91.9% | 40.6% |
| 3165403 | 4958.1.1.0 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit | 0.52 | 39.0 | 3.41e-01 | 89.2% | 53.8% |
| 4927362 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.51 | 38.0 | 3.65e-01 | 83.8% | 71.1% |
| 3514959 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.51 | 40.0 | 2.64e-01 | 100.0% | 86.7% |
| 5052777 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 36.0 | 3.23e-01 | 89.2% | 50.0% |
| 4435672 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.50 | 39.0 | 3.40e-01 | 91.9% | 55.4% |
| 5073368 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 36.0 | 3.18e-01 | 91.9% | 75.7% |
| 4068978 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.50 | 38.0 | 3.20e-01 | 89.2% | 46.7% |