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S27_BME27_629333_prodigal-single.1__X__X__00045

Bact-Vir

S27_BME27_629333_prodigal-single.1__X__X__00045

Identity

Kingdom:
phage

Quality

89.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-275
PDB
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF05704.19 best Caps_synth 24.6 2.20e-05 62.2% 34.5%
PF04488.22 Gly_transf_sug 60.2 3.60e-16 31.7% 93.5%
PF12919.14 TcdA_TcdB 24.0 3.10e-05 17.6% 7.6%
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6u4bA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.69 56.0 5.39e-01 83.6% 89.4%
4mixA00 3.90.550.20 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.67 60.0 5.88e-01 91.6% 93.1%
1g9rA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.66 54.0 5.31e-01 83.6% 88.4%
1jykA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.65 49.0 5.23e-01 77.5% 100.0%
4ecmA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.63 49.0 5.06e-01 78.6% 97.1%
1lziA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.63 55.0 5.57e-01 94.3% 92.0%
4xijA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.57 26.0 3.57e-01 81.7% 84.5%
3jvdB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 27.0 3.90e-01 82.8% 97.5%
3kjxA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 29.0 4.04e-01 82.1% 98.5%
2qu7A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 28.0 3.92e-01 82.8% 97.7%
2h3hB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 28.0 3.63e-01 85.5% 82.2%
1ixcA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 23.0 3.64e-01 85.1% 100.0%
3tb6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 30.0 3.97e-01 83.2% 98.6%
2z86D02 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.54 50.0 5.07e-01 96.9% 99.6%
5b7hB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 24.0 3.56e-01 86.6% 96.3%
4ry8A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 29.0 3.72e-01 84.7% 89.2%
3jy6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 28.0 3.86e-01 83.6% 99.2%
4yo7A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 28.0 3.87e-01 86.3% 100.0%
2eq5B01 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 24.0 3.52e-01 81.7% 93.0%
5t3yA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 26.0 3.59e-01 82.4% 92.8%
3l6uA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 27.0 3.77e-01 82.4% 98.4%
3l49A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 28.0 3.76e-01 82.8% 98.4%
5hsgA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 27.0 3.77e-01 82.4% 100.0%
3euaF01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.53 28.0 3.55e-01 90.1% 84.0%
1gcaA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 30.0 3.67e-01 85.9% 85.7%
3sqlA02 3.40.50.10870 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycosyl hydrolase family 3 0.53 29.0 3.71e-01 91.2% 90.2%
6ecpB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.53 27.0 3.50e-01 86.6% 85.5%
1i6aA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 24.0 3.54e-01 76.3% 100.0%
2c2xA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.52 28.0 3.59e-01 86.6% 87.0%
3fbtA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.52 26.0 3.46e-01 81.3% 86.4%
3grfA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.52 27.0 3.56e-01 76.3% 91.3%
6ryzC01 3.40.50.10790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal 0.51 31.0 3.78e-01 82.1% 92.6%
4ywhA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 29.0 3.82e-01 71.0% 100.0%
4f2gA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.51 28.0 3.63e-01 76.7% 93.2%
1kaeA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.51 25.0 2.85e-01 85.1% 59.9%
4bjhB01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.51 28.0 3.64e-01 95.4% 93.9%
3lftB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 27.0 3.51e-01 87.0% 91.2%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3196742 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.85 74.0 7.11e-01 99.2% 80.0%
3686694 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.84 72.0 6.71e-01 88.2% 91.7%
3179443 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.83 73.0 7.24e-01 90.1% 100.0%
4021161 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.83 71.0 6.61e-01 87.8% 83.4%
4016921 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.82 72.0 7.09e-01 90.1% 99.3%
3191860 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.82 70.0 6.78e-01 87.0% 94.0%
3176090 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.82 70.0 6.33e-01 87.8% 95.3%
3187254 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.82 75.0 7.13e-01 98.9% 83.4%
4547228 7516.1.1.75 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Caps_synth 0.82 69.0 6.13e-01 86.3% 78.3%
4015841 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.82 70.0 6.81e-01 87.8% 94.7%
3697890 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.82 71.0 6.32e-01 88.5% 79.3%
4021311 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.81 70.0 6.57e-01 87.8% 90.5%
4076605 7516.1.1.75 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Caps_synth 0.81 68.0 5.80e-01 85.5% 76.3%
None 0.81 68.0 5.88e-01 85.5% 73.8%
3191178 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.81 69.0 6.26e-01 87.8% 81.8%
3631461 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.81 69.0 6.87e-01 87.8% 99.3%
3183916 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.81 66.0 7.06e-01 87.0% 94.8%
3463791 7516.1.1.110 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth 0.80 66.0 6.30e-01 85.1% 84.0%
3412584 7516.1.1.110 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth 0.80 67.0 6.04e-01 85.5% 80.2%
3752945 7516.1.1.110 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth 0.79 66.0 6.39e-01 85.5% 87.7%
3632130 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.79 68.0 6.62e-01 88.9% 90.1%
3366906 7516.1.1.110 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth 0.78 65.0 5.87e-01 85.1% 75.6%
4626081 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.78 57.0 6.26e-01 74.0% 99.1%
3533597 7516.1.1.110 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug, Gb3_synth 0.77 67.0 6.45e-01 88.5% 87.8%
3787900 7516.1.1.67 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug 0.76 70.0 6.42e-01 94.3% 97.8%
None 0.73 62.0 5.04e-01 87.0% 96.5%
3931986 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.71 59.0 5.16e-01 85.5% 84.1%
10305 7516.1.1.25 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › TcdA_TcdB 0.70 63.0 5.07e-01 92.7% 97.8%
3944247 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.69 57.0 4.74e-01 84.4% 62.6%
3587491 7516.1.1.75 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Caps_synth 0.68 63.0 6.20e-01 98.1% 93.9%
3850285 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.67 55.0 5.09e-01 85.1% 89.8%
3649458 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.66 54.0 5.42e-01 85.9% 82.2%
3832914 7516.1.1.52 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotid_trans 0.65 55.0 5.26e-01 88.2% 92.1%
None 0.64 49.0 5.20e-01 77.9% 100.0%
1252850 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.62 25.0 4.13e-01 83.2% 100.0%
4018153 7516.1.1.51 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_21 0.59 53.0 4.35e-01 96.2% 88.9%
3593248 2007.1.6.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain 0.58 26.0 3.72e-01 74.0% 87.5%
4045879 2007.1.6.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH 0.58 26.0 3.70e-01 71.0% 86.4%
3850730 7516.1.1.21 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_64 0.58 49.0 4.70e-01 88.5% 78.0%
4308330 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.56 24.0 3.64e-01 87.4% 94.3%
3601737 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.56 44.0 4.36e-01 80.5% 96.7%
3180044 2007.1.6.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH 0.56 25.0 3.58e-01 70.6% 87.2%
3279563 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.55 51.0 4.59e-01 100.0% 96.3%
4997920 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.55 45.0 4.02e-01 86.6% 62.4%
4237802 2007.1.6.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH 0.54 28.0 3.79e-01 86.6% 94.1%
4389891 2003.1.14.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace_N 0.53 27.0 3.29e-01 80.9% 73.3%
4264208 2007.1.9.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › Exonuc_VII_L 0.52 30.0 3.39e-01 96.6% 71.5%
4248044 2003.1.1.120 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA 0.52 33.0 3.91e-01 83.2% 92.0%
3704460 2007.1.3.28 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_transf_61 0.52 30.0 3.55e-01 84.4% 81.7%
4010539 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.51 29.0 3.68e-01 85.5% 95.9%
3586885 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.51 29.0 3.50e-01 85.5% 84.8%
3291028 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.51 24.0 3.35e-01 90.5% 93.9%
4077865 2488.1.1.5 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase 0.50 27.0 3.51e-01 85.1% 92.4%