←Back to structures
S27_BME27_629333_prodigal-single.1__X__X__00089
Bact-VirS27_BME27_629333_prodigal-single.1__X__X__00089
Identity
- Kingdom:
- phage
Quality
64.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-91
Domain cluster:
rep: IMGVR_UViG_3300025131_000272-3300025131-Ga0209128_10004802__D1-83
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.69 | 43.0 | 5.01e-01 | 83.3% | 91.9% |
| 3dfgA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 31.0 | 4.15e-01 | 80.0% | 85.4% |
| 3gruA02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.64 | 40.0 | 4.12e-01 | 83.3% | 66.3% |
| 2hoeA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 31.0 | 3.78e-01 | 81.1% | 72.4% |
| 1d1dA02 | 1.10.1200.30 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Retrovirus capsid C-terminal domain | 0.56 | 43.0 | 4.58e-01 | 85.6% | 93.8% |
| 3eslA02 | 1.25.40.930 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 36.0 | 3.31e-01 | 87.8% | 48.7% |
| 1guxB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 46.0 | 3.98e-01 | 92.2% | 59.6% |
| 3nqxA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.55 | 42.0 | 3.61e-01 | 83.3% | 86.3% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 30.0 | 3.09e-01 | 84.4% | 53.3% |
| 4w9rA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 38.0 | 3.79e-01 | 75.6% | 89.4% |
| 1p6rA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 34.0 | 3.57e-01 | 87.8% | 70.7% |
| 2z99A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 33.0 | 3.37e-01 | 84.4% | 65.5% |
| 4f0zB00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 37.0 | 3.12e-01 | 74.4% | 62.6% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 29.0 | 3.05e-01 | 86.7% | 57.6% |
| 4wvaB00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.51 | 42.0 | 2.82e-01 | 93.3% | 59.9% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 29.0 | 3.00e-01 | 87.8% | 56.2% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3400250 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.61 | 25.0 | 3.23e-01 | 72.2% | 64.0% |
| 3782526 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 49.0 | 4.91e-01 | 87.8% | 87.8% |
| 137857 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.55 | 31.0 | 3.23e-01 | 83.3% | 57.8% |
| 3941586 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.53 | 30.0 | 3.22e-01 | 87.8% | 62.5% |
| 3647979 | 109.4.1.1280 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long | 0.52 | 44.0 | 3.10e-01 | 96.7% | 35.9% |
| 3293296 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.52 | 34.0 | 3.79e-01 | 82.2% | 87.1% |
| 4297810 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.52 | 30.0 | 3.03e-01 | 85.6% | 55.6% |
| 3989440 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.51 | 30.0 | 3.02e-01 | 84.4% | 55.6% |
| 2717988 | 2498.1.1.12 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M4,Peptidase_M4_C | 0.51 | 41.0 | 2.79e-01 | 87.8% | 39.9% |
| 4614033 | 101.1.2.66 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mga | 0.51 | 31.0 | 3.32e-01 | 83.3% | 67.5% |
| 5066221 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.50 | 37.0 | 2.69e-01 | 78.9% | 46.2% |
| 4226469 | 310.1.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N | 0.50 | 38.0 | 3.55e-01 | 85.6% | 65.5% |
| 3624062 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 41.0 | 2.78e-01 | 95.6% | 41.7% |