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S27_BME27_629333_prodigal-single.1__X__X__00106
Bact-VirS27_BME27_629333_prodigal-single.1__X__X__00106
Identity
- Kingdom:
- phage
Quality
58.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-108_141-216
D2
high
residues 607-717
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qybA03 | 1.10.472.80 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 | 0.62 | 49.0 | 4.63e-01 | 85.6% | 89.4% |
| 4ye6A01 | 1.10.8.1290 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1, domain 1 | 0.54 | 44.0 | 4.57e-01 | 97.3% | 98.1% |
| 3w4sA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 45.0 | 3.49e-01 | 99.1% | 68.9% |
| 3vibA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 35.0 | 2.95e-01 | 73.0% | 40.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3256630 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.63 | 51.0 | 4.82e-01 | 87.4% | 84.4% |
| 5016502 | 191.1.1.14 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_10 | 0.53 | 34.0 | 3.28e-01 | 72.1% | 53.3% |
D3
high
residues 882-939
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 40.0 | 3.91e-01 | 70.7% | 50.8% |
| 4hdoA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 57.0 | 5.00e-01 | 100.0% | 77.2% |
| 1uebA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 43.0 | 4.23e-01 | 72.4% | 88.9% |
| 3a54A01 | 2.40.50.340 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 41.0 | 3.62e-01 | 74.1% | 44.4% |
| 1d4tA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 43.0 | 3.69e-01 | 75.9% | 85.6% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 37.0 | 3.86e-01 | 77.6% | 64.7% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 34.0 | 3.69e-01 | 70.7% | 61.7% |
| 2gtiA01 | 3.30.160.820 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like | 0.62 | 36.0 | 3.48e-01 | 91.4% | 51.6% |
| 2gumB03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.61 | 44.0 | 3.47e-01 | 75.9% | 66.9% |
| 4cbvA02 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.60 | 46.0 | 3.68e-01 | 84.5% | 61.9% |
| 4m7xA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 46.0 | 4.09e-01 | 89.7% | 56.0% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 42.0 | 4.11e-01 | 74.1% | 87.5% |
| 1x9mA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.58 | 50.0 | 3.44e-01 | 100.0% | 68.1% |
| 3kk7A03 | 3.30.160.840 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 41.0 | 4.04e-01 | 75.9% | 72.6% |
| 2ia1A01 | 3.30.500.20 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › BH3703-like domains | 0.58 | 47.0 | 3.81e-01 | 93.1% | 63.0% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.57 | 33.0 | 3.49e-01 | 72.4% | 60.8% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.56 | 36.0 | 3.83e-01 | 100.0% | 74.5% |
| 2dy1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 44.0 | 2.98e-01 | 96.6% | 25.8% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 39.0 | 3.60e-01 | 74.1% | 61.3% |
| 2ebnA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 43.0 | 2.78e-01 | 86.2% | 25.3% |
| 1b9mB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 32.0 | 2.96e-01 | 81.0% | 45.8% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.54 | 44.0 | 3.58e-01 | 89.7% | 72.6% |
| 4obmA00 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.53 | 42.0 | 2.83e-01 | 91.4% | 25.2% |
| 3lm2A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 44.0 | 3.82e-01 | 98.3% | 73.2% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 42.0 | 3.70e-01 | 94.8% | 89.6% |
| 1st8A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 42.0 | 2.64e-01 | 91.4% | 78.4% |
| 4nnaA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 42.0 | 2.67e-01 | 93.1% | 69.9% |
| 2im9A02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.52 | 42.0 | 3.24e-01 | 96.6% | 54.4% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 39.0 | 3.36e-01 | 84.5% | 65.6% |
| 1efzA00 | 3.20.20.105 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like | 0.51 | 44.0 | 2.74e-01 | 100.0% | 18.8% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.50 | 38.0 | 3.33e-01 | 87.9% | 92.0% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 42.0 | 2.65e-01 | 100.0% | 17.4% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4153913 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 39.0 | 3.38e-01 | 96.6% | 31.8% |
| 5054531 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 36.0 | 3.01e-01 | 89.7% | 28.0% |
| 4992872 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 46.0 | 4.71e-01 | 74.1% | 69.1% |
| 3407758 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.67 | 58.0 | 4.69e-01 | 100.0% | 61.7% |
| 4990212 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 42.0 | 4.30e-01 | 75.9% | 67.3% |
| 4975150 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 43.0 | 4.29e-01 | 75.9% | 65.0% |
| 4963351 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 57.0 | 4.53e-01 | 100.0% | 63.3% |
| 3464671 | 4.1.1.136 ↗ | beta barrels › SH3 › SH3 › SH3 › NMD_SH3 | 0.65 | 43.0 | 4.04e-01 | 79.3% | 55.7% |
| 4947834 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 55.0 | 4.58e-01 | 100.0% | 74.3% |
| 3797728 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 54.0 | 4.82e-01 | 100.0% | 91.8% |
| 4003604 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 53.0 | 4.50e-01 | 100.0% | 85.7% |
| 3612107 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.62 | 34.0 | 3.39e-01 | 96.6% | 46.7% |
| 4993539 | 212.1.1.3 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N | 0.62 | 48.0 | 3.37e-01 | 84.5% | 55.4% |
| 4425795 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.62 | 44.0 | 4.23e-01 | 74.1% | 92.3% |
| 4043601 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.61 | 43.0 | 4.13e-01 | 72.4% | 87.7% |
| 3595832 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.61 | 33.0 | 3.42e-01 | 96.6% | 50.9% |
| 4039724 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.61 | 44.0 | 4.25e-01 | 75.9% | 92.3% |
| 5031337 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.61 | 31.0 | 3.56e-01 | 89.7% | 64.1% |
| 4307219 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.61 | 47.0 | 4.81e-01 | 86.2% | 98.2% |
| 4176687 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.60 | 44.0 | 4.23e-01 | 77.6% | 89.2% |
| 3064081 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.60 | 32.0 | 3.25e-01 | 98.3% | 48.3% |
| 3919221 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.59 | 38.0 | 3.51e-01 | 74.1% | 52.0% |
| 3602759 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.57 | 36.0 | 3.64e-01 | 75.9% | 63.3% |
| 3927286 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.56 | 34.0 | 3.10e-01 | 86.2% | 46.7% |
| 3801752 | 375.1.1.269 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF29332 | 0.56 | 38.0 | 3.99e-01 | 70.7% | 92.0% |
| 3486887 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.54 | 43.0 | 2.80e-01 | 96.6% | 28.2% |
| 4564673 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.53 | 46.0 | 2.84e-01 | 100.0% | 18.8% |
| 3289616 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.53 | 47.0 | 2.86e-01 | 100.0% | 17.7% |
| 3407060 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.53 | 44.0 | 3.21e-01 | 93.1% | 57.0% |
| 4060639 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.53 | 46.0 | 2.81e-01 | 100.0% | 17.0% |
| 4104975 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.53 | 46.0 | 2.86e-01 | 100.0% | 18.9% |
| 3405303 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.53 | 46.0 | 2.79e-01 | 100.0% | 17.0% |
| 4123424 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.52 | 45.0 | 2.77e-01 | 100.0% | 18.7% |
| 4928066 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 41.0 | 3.09e-01 | 96.6% | 64.0% |
| 4665972 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 44.0 | 2.75e-01 | 100.0% | 19.2% |
| 4141047 | 593.1.1.0 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like | 0.51 | 43.0 | 2.85e-01 | 96.6% | 65.8% |
| 3209881 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.51 | 41.0 | 2.40e-01 | 100.0% | 9.1% |
| 3899209 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 37.0 | 2.56e-01 | 93.1% | 23.1% |
D4
medium
residues 293-349_456-527
D5
medium
residues 373-455
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.73 | 45.0 | 4.68e-01 | 73.5% | 67.1% |
| 4orlA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 44.0 | 3.99e-01 | 72.3% | 49.1% |
| 2gfgA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.68 | 43.0 | 3.28e-01 | 72.3% | 27.7% |
| 2a22B00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.68 | 47.0 | 3.52e-01 | 72.3% | 95.1% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 40.0 | 3.57e-01 | 72.3% | 41.7% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.66 | 46.0 | 4.01e-01 | 72.3% | 60.2% |
| 3hdjA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.65 | 45.0 | 3.77e-01 | 84.3% | 42.1% |
| 2vt8A00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.64 | 46.0 | 3.92e-01 | 100.0% | 44.8% |
| 1cq3A00 | 2.60.240.10 | Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › Major secreted virus protein | 0.63 | 46.0 | 3.36e-01 | 77.1% | 45.5% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.62 | 39.0 | 3.61e-01 | 85.5% | 49.1% |
| 2b5lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 43.0 | 2.80e-01 | 74.7% | 21.5% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.61 | 42.0 | 3.46e-01 | 77.1% | 39.1% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.61 | 44.0 | 3.62e-01 | 83.1% | 42.3% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.60 | 42.0 | 3.66e-01 | 72.3% | 88.7% |
| 3zghA00 | 2.60.40.3400 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 44.0 | 3.50e-01 | 79.5% | 80.8% |
| 2nykA01 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.59 | 43.0 | 3.60e-01 | 77.1% | 85.1% |
| 4l9cA00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.58 | 49.0 | 4.08e-01 | 94.0% | 66.0% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.58 | 39.0 | 4.40e-01 | 79.5% | 98.3% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.58 | 41.0 | 3.45e-01 | 74.7% | 46.6% |
| 2fblB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.58 | 41.0 | 3.44e-01 | 74.7% | 70.3% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.57 | 39.0 | 3.53e-01 | 89.2% | 50.0% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.56 | 38.0 | 3.43e-01 | 89.2% | 49.2% |
| 4q28A00 | 3.30.160.780 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 38.0 | 3.50e-01 | 72.3% | 73.6% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.55 | 44.0 | 3.46e-01 | 97.6% | 40.1% |
| 4o4oA00 | 2.40.128.590 | Mainly Beta › Beta Barrel › Lipocalin › CpcT/CpeT domain | 0.55 | 48.0 | 3.69e-01 | 100.0% | 94.4% |
| 6qp7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 49.0 | 3.06e-01 | 100.0% | 88.1% |
| 2w38A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.54 | 48.0 | 3.25e-01 | 98.8% | 60.3% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 39.0 | 3.20e-01 | 90.4% | 38.4% |
| 1u14A00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.54 | 45.0 | 3.67e-01 | 95.2% | 76.3% |
| 2lyxA00 | 3.10.450.390 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 | 0.54 | 46.0 | 4.53e-01 | 92.8% | 100.0% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 44.0 | 3.70e-01 | 96.4% | 57.1% |
| 5w8mA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.53 | 46.0 | 3.58e-01 | 98.8% | 69.9% |
| 2imlA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 37.0 | 3.37e-01 | 72.3% | 86.7% |
| 1zc3B00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 38.0 | 3.53e-01 | 77.1% | 98.2% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 35.0 | 4.02e-01 | 84.3% | 95.0% |
| 3esiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 44.0 | 3.88e-01 | 92.8% | 94.4% |
| 2wjsA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 3.44e-01 | 95.2% | 59.0% |
| 1bqsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.38e-01 | 78.3% | 84.9% |
| 4amwA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 44.0 | 3.60e-01 | 92.8% | 97.3% |
| 4c23B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 43.0 | 3.24e-01 | 98.8% | 79.9% |
ECOD (74)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3512689 | 5.1.4.155 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MIOS_WD40 | 0.81 | 47.0 | 2.99e-01 | 74.7% | 13.5% |
| 3198165 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.81 | 47.0 | 3.04e-01 | 73.5% | 14.5% |
| 4030034 | 109.4.1.1140 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PEP5_VPS11 | 0.79 | 45.0 | 2.70e-01 | 77.1% | 9.5% |
| 5033392 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.73 | 51.0 | 3.43e-01 | 73.5% | 94.2% |
| 3658278 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.72 | 47.0 | 3.09e-01 | 74.7% | 16.7% |
| 4825040 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.71 | 44.0 | 3.69e-01 | 71.1% | 36.6% |
| 4012990 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.70 | 47.0 | 3.66e-01 | 96.4% | 31.8% |
| 5042514 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.69 | 49.0 | 3.75e-01 | 74.7% | 96.3% |
| 3588533 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.69 | 44.0 | 3.36e-01 | 73.5% | 28.4% |
| 5027014 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.69 | 49.0 | 3.76e-01 | 74.7% | 100.0% |
| 3203022 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.69 | 50.0 | 4.24e-01 | 75.9% | 50.4% |
| 3295586 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.67 | 43.0 | 3.48e-01 | 73.5% | 33.3% |
| 3451758 | 243.5.1.1 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 | 0.66 | 48.0 | 4.39e-01 | 74.7% | 65.7% |
| 3323226 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.66 | 43.0 | 3.54e-01 | 73.5% | 36.7% |
| 3800708 | 5.1.4.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 | 0.64 | 46.0 | 3.00e-01 | 74.7% | 21.5% |
| 5033737 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.63 | 44.0 | 3.37e-01 | 72.3% | 33.0% |
| 4000029 | 5.1.4.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 | 0.62 | 50.0 | 3.27e-01 | 84.3% | 25.2% |
| 3701976 | 10.1.1.19 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like | 0.62 | 56.0 | 3.91e-01 | 98.8% | 73.5% |
| 3233389 | 5.1.4.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 | 0.62 | 44.0 | 2.86e-01 | 74.7% | 20.6% |
| 3921654 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.62 | 43.0 | 3.69e-01 | 72.3% | 95.5% |
| 3556738 | 220.1.1.40 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › OCRL_clath_bd | 0.62 | 44.0 | 3.86e-01 | 74.7% | 91.2% |
| 3699678 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.62 | 50.0 | 3.87e-01 | 96.4% | 38.9% |
| 3585370 | 5.1.3.112 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40_2 | 0.61 | 43.0 | 3.13e-01 | 88.0% | 25.4% |
| 3485290 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.61 | 54.0 | 3.94e-01 | 100.0% | 38.3% |
| 2834340 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.61 | 42.0 | 3.57e-01 | 72.3% | 95.0% |
| 3739945 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.60 | 55.0 | 3.53e-01 | 98.8% | 67.7% |
| 3288524 | 3844.2.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG | 0.60 | 42.0 | 3.10e-01 | 73.5% | 27.0% |
| 3760926 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.60 | 42.0 | 3.62e-01 | 73.5% | 94.2% |
| 3821429 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.60 | 48.0 | 3.85e-01 | 97.6% | 44.4% |
| 3606318 | 897.1.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 | 0.60 | 54.0 | 3.97e-01 | 100.0% | 55.0% |
| 3777275 | 5.1.4.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 | 0.59 | 43.0 | 2.70e-01 | 74.7% | 25.7% |
| 3856806 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 41.0 | 2.53e-01 | 75.9% | 11.7% |
| 3930773 | 633.23.1.17 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › DuoxA | 0.58 | 44.0 | 3.12e-01 | 83.1% | 48.5% |
| 5000322 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.57 | 50.0 | 3.81e-01 | 96.4% | 66.7% |
| 3712989 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.57 | 50.0 | 3.72e-01 | 96.4% | 40.5% |
| 5000263 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.57 | 49.0 | 3.80e-01 | 98.8% | 82.1% |
| 3274838 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.57 | 47.0 | 4.02e-01 | 96.4% | 56.9% |
| 3915600 | 109.4.1.109 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 | 0.57 | 49.0 | 2.80e-01 | 98.8% | 15.0% |
| 3788095 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.56 | 43.0 | 3.68e-01 | 81.9% | 94.8% |
| 3215406 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.56 | 51.0 | 3.14e-01 | 98.8% | 85.9% |
| 4619259 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.56 | 41.0 | 3.46e-01 | 78.3% | 86.9% |
| 3463815 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 47.0 | 3.18e-01 | 95.2% | 42.6% |
| 4927376 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 49.0 | 3.25e-01 | 97.6% | 40.9% |
| 3722115 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.56 | 39.0 | 3.26e-01 | 73.5% | 98.0% |
| 3785001 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.56 | 47.0 | 3.57e-01 | 95.2% | 69.9% |
| 4960428 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.56 | 43.0 | 3.11e-01 | 91.6% | 28.0% |
| 4077476 | 9.1.1.9 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeT | 0.55 | 47.0 | 3.71e-01 | 97.6% | 61.6% |
| 4482290 | 9.1.1.9 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeT | 0.55 | 47.0 | 3.68e-01 | 100.0% | 59.0% |
| 3436392 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.55 | 47.0 | 3.18e-01 | 98.8% | 96.2% |
| 5082343 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.54 | 40.0 | 2.92e-01 | 78.3% | 33.5% |
| None | — | 0.54 | 49.0 | 3.19e-01 | 98.8% | 63.7% | |
| 87687 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.54 | 46.0 | 3.57e-01 | 96.4% | 71.6% |
| 3191562 | 5.1.4.229 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N | 0.54 | 48.0 | 3.02e-01 | 100.0% | 39.6% |
| 3243889 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.54 | 46.0 | 3.67e-01 | 100.0% | 49.7% |
| 4938030 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 47.0 | 3.06e-01 | 100.0% | 40.0% |
| 3410497 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.53 | 45.0 | 2.85e-01 | 92.8% | 52.1% |
| 3507419 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 47.0 | 3.60e-01 | 98.8% | 42.6% |
| 3341168 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.53 | 47.0 | 3.75e-01 | 97.6% | 100.0% |
| 3204303 | 10.1.1.22 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF1349 | 0.53 | 45.0 | 3.41e-01 | 95.2% | 53.3% |
| 3380688 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.53 | 46.0 | 3.10e-01 | 92.8% | 31.7% |
| 3944143 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.52 | 46.0 | 3.71e-01 | 96.4% | 90.6% |
| 4021124 | 5.1.5.88 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nucleoporin_N | 0.52 | 45.0 | 2.78e-01 | 96.4% | 28.5% |
| 3194191 | 5.1.4.97 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop | 0.52 | 43.0 | 2.69e-01 | 94.0% | 95.3% |
| 5047048 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.52 | 45.0 | 3.54e-01 | 100.0% | 68.9% |
| 3920678 | 5.1.5.41 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_2 | 0.52 | 45.0 | 2.96e-01 | 96.4% | 44.1% |
| 1309699 | 881.1.1.11 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF5642 | 0.51 | 45.0 | 3.52e-01 | 100.0% | 63.7% |
| 3460976 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.51 | 43.0 | 2.87e-01 | 92.8% | 51.9% |
| 3478975 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.51 | 40.0 | 3.44e-01 | 84.3% | 91.1% |
| 3589333 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 39.0 | 3.78e-01 | 83.1% | 71.6% |
| 5080576 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.51 | 38.0 | 2.91e-01 | 80.7% | 39.2% |
| 3446031 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.51 | 46.0 | 3.45e-01 | 98.8% | 72.5% |
| 3573723 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.51 | 43.0 | 2.72e-01 | 100.0% | 27.1% |
| 3908594 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 42.0 | 2.86e-01 | 95.2% | 50.9% |
| 3827726 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.50 | 45.0 | 3.07e-01 | 98.8% | 62.4% |
D6
medium
residues 528-606