←Back to structures
S27_BME27_629333_prodigal-single.1__X__X__00157
Bact-VirS27_BME27_629333_prodigal-single.1__X__X__00157
Identity
- Kingdom:
- phage
Quality
58.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 39-136
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6mcjA00 | 1.10.2090.10 | Mainly Alpha › Orthogonal Bundle › orange carotenoid protein, domain 2 › Orange carotenoid-binding protein, N-terminal domain | 0.63 | 46.0 | 4.05e-01 | 100.0% | 52.4% |
| 4c2uA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.60 | 37.0 | 3.99e-01 | 98.0% | 72.8% |
| 3if4A02 | 1.20.5.1210 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Integron cassette protein helical domain | 0.58 | 29.0 | 3.97e-01 | 78.6% | 100.0% |
| 7wj9A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 39.0 | 2.77e-01 | 74.5% | 93.3% |
| 2dceA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 38.0 | 4.18e-01 | 96.9% | 93.4% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 4.19e-01 | 99.0% | 98.7% |
| 2jaqA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 35.0 | 2.88e-01 | 70.4% | 72.0% |
| 1kv9A02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.51 | 39.0 | 3.93e-01 | 100.0% | 79.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3677487 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.57 | 35.0 | 3.35e-01 | 90.8% | 50.0% |
| 3600865 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.55 | 36.0 | 3.03e-01 | 100.0% | 38.2% |
| 3824951 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.55 | 33.0 | 3.34e-01 | 94.9% | 60.0% |
| 3429410 | 5059.1.1.14 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › CRT-like | 0.54 | 47.0 | 3.68e-01 | 100.0% | 43.8% |
| 2494216 | 5059.1.1.4 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Nuc_sug_transp | 0.51 | 45.0 | 3.81e-01 | 100.0% | 61.6% |
| 4124895 | 4043.1.1.1 ↗ | a+b complex topology › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 0.51 | 30.0 | 2.87e-01 | 98.0% | 46.7% |
| 4946940 | 3054.1.1.0 ↗ | alpha arrays › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol | 0.51 | 33.0 | 3.24e-01 | 95.9% | 60.0% |