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S27_BME27_629333_prodigal-single.1__X__X__00203
Bact-VirS27_BME27_629333_prodigal-single.1__X__X__00203
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-292
Domain cluster:
rep: IMGVR_UViG_3300000193_000010-3300000193-SI47jul10_135mDRAFT_100036826__D17-253
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v5yA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 20.0 | 3.35e-01 | 77.9% | 77.3% |
| 2dibA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 22.0 | 3.64e-01 | 98.2% | 86.6% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 24.0 | 3.71e-01 | 97.0% | 98.0% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 24.0 | 3.61e-01 | 95.9% | 93.3% |
| 4oq8A00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.57 | 24.0 | 3.26e-01 | 99.3% | 71.5% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.56 | 22.0 | 3.55e-01 | 98.5% | 100.0% |
| 3cpxA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.55 | 16.0 | 3.12e-01 | 98.9% | 100.0% |
| 4x8iA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.55 | 21.0 | 3.41e-01 | 77.1% | 100.0% |
| 3cfuA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 27.0 | 3.57e-01 | 93.7% | 86.8% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 22.0 | 3.36e-01 | 96.7% | 97.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4978554 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 25.0 | 3.83e-01 | 99.6% | 95.0% |
| 4373113 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 24.0 | 3.62e-01 | 95.6% | 92.4% |
| 4104901 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.52 | 25.0 | 3.31e-01 | 97.8% | 80.7% |
| 3240187 | 11.1.1.426 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NDNF | 0.51 | 23.0 | 3.31e-01 | 99.3% | 91.7% |
| 5044858 | 221.1.3.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain | 0.50 | 24.0 | 3.42e-01 | 83.0% | 98.3% |
D2
high
residues 299-382
Domain cluster:
rep: 5H_04062016_scaffold_1_prodigal-single.1__X__X__00155__D177-242