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S27_BME27_629333_prodigal-single.1__X__X__00277

Bact-Vir

S27_BME27_629333_prodigal-single.1__X__X__00277

Identity

Kingdom:
phage

Quality

93.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-48
PDB
Domain cluster: representative
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yjgA00 1.20.120.240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 0.98 93.0 6.10e-01 100.0% 29.3%
4fvmA06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.96 89.0 8.75e-01 100.0% 93.8%
6yz2A01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.96 89.0 6.34e-01 100.0% 38.3%
2qsbA00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.95 81.0 6.43e-01 91.3% 49.4%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.95 88.0 7.77e-01 100.0% 93.8%
2pmsC00 6.10.140.920 Special › Helix non-globular › Helix Hairpins › 0.95 89.0 6.47e-01 100.0% 55.0%
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.94 86.0 6.71e-01 100.0% 50.0%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.94 83.0 6.51e-01 93.5% 82.6%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.94 86.0 7.92e-01 100.0% 79.3%
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.94 86.0 8.41e-01 97.8% 100.0%
6xkyA01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.93 85.0 5.47e-01 100.0% 76.5%
1ya0A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.93 86.0 5.39e-01 100.0% 22.3%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.93 86.0 7.68e-01 100.0% 74.2%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.93 79.0 7.06e-01 100.0% 67.7%
2r9iA00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.93 82.0 7.04e-01 100.0% 63.4%
1vp7A00 1.10.287.1040 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Exonuclease VII, small subunit 0.92 79.0 6.85e-01 93.5% 63.2%
5z7qA00 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.92 83.0 5.43e-01 100.0% 26.1%
1s5jA04 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.92 83.0 7.53e-01 100.0% 77.0%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.91 83.0 6.98e-01 100.0% 62.2%
3qf7A02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.91 85.0 7.49e-01 100.0% 73.0%
1yc9A01 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.90 81.0 4.75e-01 100.0% 16.2%
3rx6A00 1.20.58.1090 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer 0.90 82.0 5.31e-01 100.0% 26.7%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.90 82.0 5.93e-01 100.0% 39.3%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.90 78.0 7.13e-01 100.0% 74.1%
3sfvB02 6.10.140.2010 Special › Helix non-globular › Helix Hairpins › 0.90 82.0 5.20e-01 100.0% 23.0%
3u0cA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.89 82.0 5.53e-01 100.0% 30.5%
1rq0A01 6.10.140.160 Special › Helix non-globular › Helix Hairpins › 0.89 81.0 6.56e-01 100.0% 59.0%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.89 82.0 6.23e-01 100.0% 48.5%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.89 83.0 6.79e-01 100.0% 65.4%
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.89 79.0 5.74e-01 100.0% 38.5%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.89 78.0 6.13e-01 100.0% 47.9%
2yevC00 6.10.280.110 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.89 71.0 6.35e-01 87.0% 96.8%
2jdiG01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.88 82.0 7.32e-01 100.0% 77.0%
2e5yA02 1.20.5.440 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain 0.88 74.0 7.55e-01 93.5% 93.3%
2o8pA00 1.20.190.20 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain 0.88 74.0 4.68e-01 100.0% 19.6%
1nh1A01 1.10.3290.20 Mainly Alpha › Orthogonal Bundle › Fic-like fold › 0.88 81.0 5.14e-01 100.0% 23.5%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.88 78.0 6.04e-01 100.0% 50.0%
5xtck00 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.87 77.0 6.02e-01 100.0% 47.4%
3cazB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.86 76.0 4.86e-01 100.0% 23.3%
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.86 76.0 6.19e-01 100.0% 57.6%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.86 76.0 6.96e-01 100.0% 78.7%
3zgxA02 6.10.140.1720 Special › Helix non-globular › Helix Hairpins › 0.85 75.0 6.00e-01 100.0% 53.8%
3k29A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.85 74.0 5.03e-01 100.0% 65.8%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.84 73.0 5.94e-01 100.0% 76.1%
8b9zK01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.84 72.0 5.71e-01 100.0% 48.4%
1t7sA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.84 72.0 5.23e-01 100.0% 35.7%
5u56A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.84 73.0 5.50e-01 100.0% 42.0%
4gouA03 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.83 74.0 4.81e-01 100.0% 48.7%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.83 73.0 5.04e-01 100.0% 70.0%
3tufA00 1.10.287.4300 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like 0.83 72.0 5.38e-01 100.0% 40.9%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.83 69.0 6.08e-01 100.0% 63.6%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.83 72.0 6.35e-01 97.8% 100.0%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.82 70.0 5.96e-01 100.0% 100.0%
4finB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.82 65.0 3.95e-01 93.5% 14.7%
2pvqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.82 73.0 5.54e-01 100.0% 44.3%
4jvyB00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.82 71.0 4.57e-01 93.5% 23.7%
4aifA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.82 72.0 5.04e-01 100.0% 32.6%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.81 70.0 5.12e-01 95.7% 77.8%
3llkA01 1.20.120.1960 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › QSOX sulfhydryl oxidase domain 0.80 64.0 5.07e-01 95.7% 42.9%
1yq1A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.79 67.0 5.13e-01 100.0% 44.6%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 68.0 5.81e-01 100.0% 63.2%
4mh6A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.78 66.0 4.62e-01 100.0% 29.6%
1lfkA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.78 64.0 3.75e-01 91.3% 11.5%
4cpgA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.77 65.0 5.76e-01 100.0% 65.2%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.77 63.0 5.36e-01 95.7% 55.7%
2np9A01 1.20.58.1300 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 62.0 4.44e-01 100.0% 32.1%
8d8lN01 1.10.287.1480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 60.0 4.96e-01 100.0% 50.0%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.73 57.0 4.92e-01 100.0% 53.1%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.72 59.0 4.50e-01 91.3% 66.4%
3gnlB02 1.10.287.1890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 58.0 5.29e-01 100.0% 69.1%
5aj3N01 1.10.287.1480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 57.0 4.70e-01 97.8% 48.4%
2jaeA03 1.20.1440.240 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.68 53.0 4.40e-01 100.0% 56.4%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.68 58.0 5.16e-01 100.0% 67.7%
4l8jA04 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.67 54.0 5.11e-01 100.0% 83.1%
4mk3A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.67 52.0 4.15e-01 100.0% 40.0%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.66 52.0 4.99e-01 100.0% 98.3%
4u2vA02 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.66 57.0 4.72e-01 95.7% 56.2%
2gsvA00 6.10.140.40 Special › Helix non-globular › Helix Hairpins › 0.63 52.0 4.70e-01 97.8% 68.7%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3704754 3939.1.1.0 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.99 93.0 5.71e-01 100.0% 20.4%
3681643 109.4.1.146 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_load 0.99 93.0 5.30e-01 100.0% 12.3%
3294437 5086.1.1.110 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HisKA 0.98 93.0 7.43e-01 100.0% 58.7%
3527051 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.98 92.0 6.97e-01 100.0% 48.4%
4300897 5094.1.1.1 ↗ a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH 0.98 92.0 6.34e-01 100.0% 35.4%
4387547 7013.1.1.1 ↗ alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 0.98 92.0 5.80e-01 100.0% 24.2%
3408277 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.98 92.0 6.56e-01 100.0% 40.0%
3967403 622.4.1.0 ↗ alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.97 91.0 7.95e-01 100.0% 70.8%
3168103 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.97 91.0 6.94e-01 100.0% 49.5%
4396464 605.1.1.305 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Exonuc_VII_S 0.97 91.0 8.21e-01 100.0% 76.7%
3339561 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.97 91.0 6.82e-01 100.0% 47.0%
5030987 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.97 91.0 7.32e-01 100.0% 57.5%
3785849 192.13.1.1 ↗ alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like › Isy1 0.97 91.0 6.23e-01 100.0% 34.1%
3742731 7013.1.1.1 ↗ alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 0.97 91.0 6.02e-01 100.0% 29.7%
3291034 3271.1.1.1 ↗ alpha arrays › CdiA C-terminal nuclease domain › CdiA C-terminal nuclease domain › CdiA C-terminal nuclease domain › Ntox28 0.97 90.0 6.89e-01 100.0% 48.4%
3486831 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.97 90.0 5.47e-01 100.0% 18.8%
3620978 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.97 91.0 5.26e-01 100.0% 14.4%
3278856 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.97 90.0 8.75e-01 100.0% 92.0%
3783731 2004.1.1.505 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 0.97 90.0 5.07e-01 100.0% 11.0%
4193561 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.97 85.0 8.61e-01 93.5% 95.6%
3708446 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.97 90.0 7.14e-01 100.0% 54.1%
4146694 192.29.1.277 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Dynamitin 0.97 90.0 7.85e-01 100.0% 70.8%
3964578 5094.1.1.1 ↗ a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH 0.96 90.0 6.14e-01 100.0% 32.9%
4166693 7013.1.1.1 ↗ alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 0.96 87.0 5.54e-01 100.0% 23.8%
4249161 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.96 90.0 7.88e-01 100.0% 72.3%
3629641 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.96 89.0 5.40e-01 100.0% 18.8%
4062237 604.11.1.1 ↗ alpha bundles › Spectrin repeat-like › XseB-like › XseB-like › Exonuc_VII_S 0.96 87.0 7.33e-01 95.7% 62.9%
4114398 3755.3.1.32 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Dynamitin 0.96 89.0 5.46e-01 100.0% 20.0%
4054050 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.96 90.0 6.72e-01 100.0% 46.0%
3962991 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.96 89.0 5.65e-01 100.0% 23.6%
3671626 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.96 87.0 5.62e-01 97.8% 25.0%
4416633 604.11.1.1 ↗ alpha bundles › Spectrin repeat-like › XseB-like › XseB-like › Exonuc_VII_S 0.96 86.0 7.76e-01 95.7% 73.3%
3251379 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.96 89.0 7.03e-01 100.0% 55.3%
4263647 192.13.1.1 ↗ alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like › Isy1 0.96 89.0 6.00e-01 100.0% 31.7%
3718498 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.95 89.0 6.90e-01 100.0% 51.1%
4453179 7013.1.1.1 ↗ alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 0.95 85.0 5.38e-01 100.0% 22.6%
3495261 109.4.1.1844 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_10, TPR_12 0.95 88.0 4.93e-01 100.0% 10.6%
3594586 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.95 89.0 6.78e-01 100.0% 48.4%
5046472 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.95 88.0 6.71e-01 100.0% 48.4%
3737668 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.95 87.0 6.31e-01 100.0% 40.0%
4357799 192.13.1.1 ↗ alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like › Isy1 0.95 88.0 6.12e-01 100.0% 35.4%
3885709 192.13.1.0 ↗ alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like 0.95 87.0 7.26e-01 100.0% 61.3%
4965149 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.95 85.0 8.27e-01 95.7% 88.0%
3698887 6110.1.1.1 ↗ alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.95 88.0 4.84e-01 100.0% 9.1%
4994917 3834.1.1.25 ↗ alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 0.95 88.0 5.36e-01 100.0% 18.8%
3834362 3832.1.1.2 ↗ alpha bundles › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › PF25968 0.95 87.0 4.80e-01 100.0% 8.4%
3943890 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.95 88.0 5.20e-01 100.0% 16.2%
4982777 3291.1.1.238 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › DUF7121 0.95 86.0 5.22e-01 95.7% 19.1%
3378121 109.4.1.276 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EDC4_C 0.94 87.0 5.87e-01 100.0% 30.7%
139445 622.4.1.1 ↗ alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Blo-t-5 0.94 86.0 6.51e-01 100.0% 45.5%
4259224 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.94 88.0 5.84e-01 100.0% 29.7%
3819233 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.94 89.0 6.34e-01 100.0% 40.0%
1878710 4970.1.1.1 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_B 0.94 87.0 8.04e-01 100.0% 82.1%
3968484 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.94 86.0 7.35e-01 100.0% 67.1%
3808845 5086.1.1.90 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › V_ATPase_I 0.94 89.0 5.91e-01 100.0% 30.7%
5081955 3834.1.1.25 ↗ alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 0.94 87.0 5.21e-01 100.0% 17.0%
4634395 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.94 86.0 6.39e-01 100.0% 43.8%
3243299 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.94 85.0 7.32e-01 100.0% 65.7%
3375405 4323.1.1.1 ↗ alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I 0.94 88.0 5.88e-01 100.0% 30.7%
4336172 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.94 86.0 5.00e-01 100.0% 14.2%
3218199 192.4.1.0 ↗ alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) 0.94 88.0 6.78e-01 100.0% 51.1%
3969538 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.94 87.0 8.10e-01 100.0% 83.6%
3931883 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.93 86.0 6.29e-01 100.0% 41.8%
4435642 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.93 86.0 6.49e-01 100.0% 46.0%
2456957 192.13.1.1 ↗ alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like › Isy1 0.93 85.0 7.94e-01 100.0% 82.1%
4970557 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.93 85.0 7.30e-01 100.0% 65.7%
2409294 601.52.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Flagellar hook-associated protein 1 helical domain › Flagellar hook-associated protein 1 helical domain › Flagellin_N 0.93 84.0 5.87e-01 100.0% 34.8%
5070059 3834.1.1.25 ↗ alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 0.93 85.0 5.13e-01 97.8% 18.8%
3225544 4006.1.1.0 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain 0.93 85.0 6.41e-01 100.0% 46.0%
3957419 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.92 85.0 7.05e-01 100.0% 61.3%
4124331 192.15.1.76 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › CUPID 0.92 83.0 6.14e-01 100.0% 41.8%
3472977 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.92 84.0 6.28e-01 100.0% 43.8%
3933449 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.91 82.0 6.48e-01 100.0% 51.1%
None — 0.91 80.0 4.34e-01 100.0% 6.3%
4232718 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.91 83.0 6.32e-01 100.0% 46.0%
3871879 3755.3.1.44 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › JMY 0.91 82.0 4.74e-01 100.0% 12.4%
4293733 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.91 83.0 6.20e-01 100.0% 43.8%
4027114 3331.1.1.8 ↗ a+b two layers › Uncharacterized protein yibL › Uncharacterized protein yibL › Uncharacterized protein yibL › RRP36 0.91 82.0 5.74e-01 100.0% 36.3%
3890037 6067.1.1.1 ↗ alpha arrays › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › SGTA_dimer 0.91 80.0 7.03e-01 95.7% 67.7%
3619200 192.15.1.76 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › CUPID 0.91 81.0 5.49e-01 100.0% 29.7%
3684830 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.90 81.0 6.22e-01 100.0% 46.0%
3178900 192.2.1.30 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Uds1 0.90 82.0 5.60e-01 100.0% 36.6%
3880178 192.8.1.92 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CUPID 0.90 80.0 6.62e-01 100.0% 57.5%
4512994 2007.6.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › Ribosomal_S2 0.90 83.0 5.21e-01 100.0% 22.9%
3716516 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.90 80.0 5.44e-01 100.0% 30.3%
3518386 192.1.1.0 ↗ alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.90 79.0 6.73e-01 100.0% 61.3%
3920125 3755.3.1.450 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Uso1_p115_C 0.89 81.0 5.20e-01 100.0% 23.6%
3732353 109.4.1.128 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G_like_2 0.89 80.0 4.82e-01 100.0% 25.1%
4397665 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.87 77.0 5.87e-01 100.0% 45.0%
4319295 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.87 78.0 5.92e-01 100.0% 88.6%
4682501 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.86 78.0 5.96e-01 100.0% 46.0%
4097040 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.86 77.0 5.91e-01 100.0% 94.0%
3256824 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.86 75.0 4.54e-01 100.0% 16.1%
3580316 4082.1.1.0 ↗ alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain 0.84 71.0 7.23e-01 97.8% 100.0%
3731259 5042.1.1.1 ↗ extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA 0.84 76.0 4.97e-01 100.0% 25.7%
4589656 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.83 72.0 5.07e-01 100.0% 31.7%
3585791 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.82 71.0 6.10e-01 100.0% 61.3%