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S27_BME27_629333_prodigal-single.1__X__X__00279
Bact-VirS27_BME27_629333_prodigal-single.1__X__X__00279
Identity
- Kingdom:
- phage
Quality
79.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-91
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b34A05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.72 | 62.0 | 4.11e-01 | 100.0% | 28.9% |
| 6wm2P02 | 1.25.40.150 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › V-type ATPase, subunit H, C-terminal domain | 0.67 | 56.0 | 5.00e-01 | 95.9% | 99.1% |
| 1f5mA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.67 | 50.0 | 3.80e-01 | 80.8% | 97.2% |
| 7wu8B01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.67 | 53.0 | 5.17e-01 | 87.7% | 83.5% |
| 2nx4C00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 52.0 | 3.90e-01 | 86.3% | 78.1% |
| 3ajcA01 | 1.10.220.30 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain | 0.65 | 57.0 | 5.13e-01 | 100.0% | 75.0% |
| 1s2xA00 | 1.20.190.30 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › CAG pathogenicity island protein, CagZ | 0.65 | 50.0 | 3.80e-01 | 84.9% | 84.4% |
| 3ccyA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 47.0 | 3.83e-01 | 79.5% | 63.9% |
| 2lvfA00 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.63 | 50.0 | 4.37e-01 | 87.7% | 84.2% |
| 4w8pA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.63 | 44.0 | 3.69e-01 | 74.0% | 63.1% |
| 7e5aB02 | 1.20.1000.10 | Mainly Alpha › Up-down Bundle › Signaling Protein - Interferon-induced Guanylate-binding Protein 1; Chain A, domain 1 › Guanylate-binding protein, C-terminal domain | 0.63 | 44.0 | 3.45e-01 | 74.0% | 41.5% |
| 2dg8D00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 49.0 | 3.83e-01 | 87.7% | 78.6% |
| 3d7iB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.62 | 50.0 | 4.64e-01 | 91.8% | 95.9% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 41.0 | 4.09e-01 | 71.2% | 65.4% |
| 2i9cA01 | 1.25.40.70 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) | 0.61 | 53.0 | 4.69e-01 | 100.0% | 90.1% |
| 7qi3A01 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.61 | 48.0 | 3.19e-01 | 87.7% | 46.7% |
| 1j1jA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.61 | 48.0 | 4.09e-01 | 90.4% | 84.1% |
| 4ydsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 51.0 | 3.70e-01 | 100.0% | 37.2% |
| 2olpA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 43.0 | 3.36e-01 | 76.7% | 52.3% |
| 1y4cA03 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.59 | 40.0 | 3.56e-01 | 72.6% | 68.1% |
| 7cc7A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 49.0 | 3.64e-01 | 100.0% | 41.2% |
| 1n1cA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.57 | 41.0 | 4.02e-01 | 78.1% | 91.5% |
| 3vz3A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.57 | 49.0 | 3.42e-01 | 100.0% | 77.2% |
| 1hssA00 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.57 | 49.0 | 4.36e-01 | 100.0% | 93.7% |
| 2hkuB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 48.0 | 3.69e-01 | 100.0% | 63.2% |
| 1euhA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 43.0 | 2.98e-01 | 97.3% | 22.6% |
| 1txuA02 | 1.20.1050.80 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › VPS9 domain | 0.56 | 43.0 | 3.45e-01 | 86.3% | 60.6% |
| 5domA00 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.54 | 43.0 | 4.11e-01 | 91.8% | 90.0% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.52 | 31.0 | 3.09e-01 | 89.0% | 56.6% |
| 1bbhA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.51 | 36.0 | 3.07e-01 | 75.3% | 71.8% |
| 1hy5B00 | 1.20.120.260 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Virulence factor YopE uncharacterised domain | 0.51 | 37.0 | 3.22e-01 | 79.5% | 63.6% |
| 6bekD00 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 40.0 | 3.84e-01 | 90.4% | 80.9% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 35.0 | 3.49e-01 | 74.0% | 93.6% |
| 5um2A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 38.0 | 3.00e-01 | 82.2% | 98.1% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3414996 | 109.4.1.1573 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29376 | 0.75 | 66.0 | 4.11e-01 | 100.0% | 19.3% |
| None | — | 0.73 | 64.0 | 4.53e-01 | 100.0% | 35.6% | |
| None | — | 0.72 | 63.0 | 4.27e-01 | 100.0% | 28.1% | |
| 3927829 | 109.4.1.2552 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_19, HAT_PRP39_C | 0.72 | 63.0 | 3.97e-01 | 100.0% | 20.0% |
| None | — | 0.71 | 62.0 | 4.36e-01 | 100.0% | 32.9% | |
| 3879473 | 109.4.1.1673 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_14, TPR_16, TPR_19, PF29376 | 0.71 | 62.0 | 3.88e-01 | 100.0% | 19.5% |
| 4576857 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 61.0 | 4.95e-01 | 100.0% | 69.7% |
| 3500065 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 60.0 | 4.50e-01 | 100.0% | 63.5% |
| 3515736 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 58.0 | 4.01e-01 | 91.8% | 41.2% |
| 3358502 | 109.4.1.1495 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26522 | 0.70 | 59.0 | 4.50e-01 | 97.3% | 53.9% |
| 3519233 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 58.0 | 4.01e-01 | 100.0% | 27.5% |
| 3555039 | 109.4.1.1765 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF31007 | 0.68 | 59.0 | 4.92e-01 | 100.0% | 75.6% |
| 3513011 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 58.0 | 4.31e-01 | 100.0% | 47.3% |
| 3695052 | 109.4.1.363 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tcf25 | 0.67 | 57.0 | 3.52e-01 | 100.0% | 16.8% |
| 3859023 | 109.4.1.1573 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29376 | 0.66 | 59.0 | 4.06e-01 | 100.0% | 28.8% |
| 3616859 | 532.2.1.0 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains | 0.66 | 52.0 | 5.19e-01 | 89.0% | 100.0% |
| 3742952 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 55.0 | 4.50e-01 | 95.9% | 49.7% |
| 3827818 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 55.0 | 4.30e-01 | 95.9% | 43.6% |
| None | — | 0.65 | 54.0 | 3.83e-01 | 95.9% | 29.4% | |
| 4169813 | 185.1.1.5 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Gliadin | 0.59 | 47.0 | 4.19e-01 | 89.0% | 84.5% |
| 3983685 | 109.3.1.84 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Toxin_15 | 0.59 | 51.0 | 3.41e-01 | 100.0% | 50.3% |
| 3888076 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.58 | 48.0 | 3.97e-01 | 97.3% | 82.1% |
| 3285044 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.57 | 45.0 | 3.19e-01 | 91.8% | 77.4% |
| 4984715 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.57 | 43.0 | 3.16e-01 | 83.6% | 93.0% |
| 3796324 | 3371.1.1.1 ↗ | few secondary structure elements › Regulator of transcription protein Rtr1 › Regulator of transcription protein Rtr1 › Regulator of transcription protein Rtr1 › RPAP2_Rtr1 | 0.56 | 44.0 | 3.59e-01 | 90.4% | 65.8% |
| 4497186 | 185.1.1.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl | 0.55 | 43.0 | 3.73e-01 | 89.0% | 86.4% |