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S27_BME27_629333_prodigal-single.1__X__X__00303
Bact-VirS27_BME27_629333_prodigal-single.1__X__X__00303
Identity
- Kingdom:
- phage
Quality
66.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 89-180
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 40.0 | 4.45e-01 | 84.8% | 68.0% |
| 1kiaA01 | 3.30.46.10 | Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 | 0.64 | 45.0 | 4.72e-01 | 92.4% | 80.7% |
| 3a0rA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 35.0 | 3.37e-01 | 78.3% | 47.2% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.62 | 41.0 | 4.69e-01 | 96.7% | 98.4% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 35.0 | 2.95e-01 | 85.9% | 33.3% |
| 2kpnA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 42.0 | 4.52e-01 | 100.0% | 83.1% |
| 1nw1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 50.0 | 4.98e-01 | 94.6% | 85.4% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 34.0 | 3.42e-01 | 84.8% | 53.7% |
| 3mgdB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 48.0 | 4.09e-01 | 88.0% | 61.2% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.59 | 36.0 | 4.35e-01 | 93.5% | 98.2% |
| 3jvnA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 48.0 | 4.38e-01 | 88.0% | 71.3% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 34.0 | 3.21e-01 | 79.3% | 46.3% |
| 2q0yA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 47.0 | 4.14e-01 | 88.0% | 70.3% |
| 7uclA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 45.0 | 4.40e-01 | 84.8% | 80.4% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 43.0 | 3.56e-01 | 97.8% | 44.0% |
| 1hq0A00 | 3.60.100.10 | Alpha Beta › 4-Layer Sandwich › Cytotoxic necrotizing factor 1 (CNF1) › Cytotoxic necrotizing factor, Rho-activating domain | 0.57 | 46.0 | 3.23e-01 | 87.0% | 87.1% |
| 4ktpA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.57 | 44.0 | 3.29e-01 | 84.8% | 53.6% |
| 3cqnB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 42.0 | 3.55e-01 | 80.4% | 75.8% |
| 6yfiB01 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.56 | 38.0 | 3.35e-01 | 82.6% | 48.1% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 42.0 | 3.39e-01 | 79.3% | 74.9% |
| 8a9nA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 45.0 | 4.03e-01 | 88.0% | 66.4% |
| 4boeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 38.0 | 3.22e-01 | 91.3% | 41.6% |
| 5w8mA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.55 | 44.0 | 3.52e-01 | 88.0% | 97.4% |
| 1bywA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 36.0 | 3.44e-01 | 85.9% | 56.4% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.55 | 44.0 | 3.28e-01 | 87.0% | 83.5% |
| 1kdgA02 | 3.30.410.10 | Alpha Beta › 2-Layer Sandwich › Cholesterol Oxidase; domain 2 › Cholesterol Oxidase; domain 2 | 0.54 | 42.0 | 3.19e-01 | 80.4% | 60.8% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.54 | 39.0 | 3.48e-01 | 76.1% | 71.8% |
| 2bv4A00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.54 | 40.0 | 3.75e-01 | 79.3% | 98.2% |
| 2i79D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 43.0 | 3.55e-01 | 88.0% | 56.3% |
| 4ztkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 37.0 | 2.77e-01 | 73.9% | 99.6% |
| 3f14A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 44.0 | 4.16e-01 | 94.6% | 86.6% |
| 7z2bK01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.53 | 48.0 | 3.31e-01 | 100.0% | 45.9% |
| 4bj8K00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.53 | 44.0 | 4.11e-01 | 95.7% | 92.5% |
| 3fh1A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 43.0 | 3.98e-01 | 92.4% | 81.1% |
| 3vhxF00 | 2.60.40.4330 | Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain | 0.52 | 39.0 | 3.78e-01 | 80.4% | 75.5% |
| 3jvvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 32.0 | 3.17e-01 | 79.3% | 59.0% |
| 1vlrA01 | 3.30.200.40 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Scavenger mRNA decapping enzyme, N-terminal domain | 0.51 | 41.0 | 4.02e-01 | 85.9% | 83.7% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 32.0 | 3.16e-01 | 79.3% | 59.0% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3730749 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.72 | 39.0 | 3.67e-01 | 79.3% | 44.5% |
| 3995113 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.72 | 40.0 | 4.02e-01 | 79.3% | 53.7% |
| 146266 | 295.1.1.8 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3276 | 0.72 | 40.0 | 4.23e-01 | 84.8% | 60.7% |
| 3818341 | 331.9.1.4 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla | 0.68 | 40.0 | 4.37e-01 | 84.8% | 70.5% |
| 3610137 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.67 | 40.0 | 2.51e-01 | 84.8% | 11.4% |
| 3957641 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.66 | 31.0 | 3.84e-01 | 73.9% | 72.7% |
| 3698492 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.66 | 39.0 | 3.52e-01 | 80.4% | 44.0% |
| 5047354 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.64 | 36.0 | 3.28e-01 | 80.4% | 42.5% |
| 5039455 | 223.1.1.27 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 | 0.64 | 36.0 | 3.24e-01 | 79.3% | 41.5% |
| 5055184 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.63 | 42.0 | 4.40e-01 | 91.3% | 72.9% |
| 5040084 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.62 | 41.0 | 3.73e-01 | 84.8% | 51.7% |
| 4951690 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.61 | 34.0 | 2.91e-01 | 80.4% | 34.5% |
| 4341158 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.60 | 43.0 | 3.58e-01 | 92.4% | 42.3% |
| 3614712 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.59 | 36.0 | 2.72e-01 | 80.4% | 25.5% |
| 3498059 | 5.1.5.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WDR93 | 0.58 | 50.0 | 3.20e-01 | 94.6% | 33.5% |
| 5047292 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.58 | 34.0 | 3.20e-01 | 80.4% | 47.3% |
| 3587340 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 40.0 | 4.19e-01 | 90.2% | 78.8% |
| 3740970 | 5.1.4.249 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_pof12 | 0.58 | 47.0 | 3.14e-01 | 87.0% | 34.9% |
| 3693142 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.58 | 49.0 | 3.19e-01 | 95.7% | 86.9% |
| 4929184 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 43.0 | 3.55e-01 | 77.2% | 52.9% |
| 5018492 | 223.1.1.24 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 | 0.57 | 33.0 | 2.98e-01 | 81.5% | 40.8% |
| 3281898 | 12.3.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N | 0.57 | 45.0 | 3.23e-01 | 85.9% | 50.2% |
| 3222003 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.56 | 48.0 | 3.21e-01 | 94.6% | 44.2% |
| 4988329 | 223.1.1.20 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › DUF3365 | 0.55 | 48.0 | 3.74e-01 | 94.6% | 67.4% |
| 3694763 | 375.1.1.222 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF29994 | 0.55 | 45.0 | 4.08e-01 | 100.0% | 65.4% |
| 3943050 | 274.1.1.51 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › PF27121 | 0.55 | 48.0 | 3.93e-01 | 100.0% | 70.3% |
| 5040414 | 11.1.1.1443 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29994 | 0.54 | 45.0 | 4.39e-01 | 100.0% | 84.0% |
| 4998370 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.53 | 49.0 | 3.57e-01 | 100.0% | 39.2% |
| 3301111 | 331.3.1.25 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PaO | 0.53 | 41.0 | 3.55e-01 | 85.9% | 54.8% |
| 3854465 | 283.2.1.8 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 | 0.53 | 44.0 | 4.07e-01 | 100.0% | 71.7% |
| 4012193 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.53 | 42.0 | 3.98e-01 | 85.9% | 89.1% |
| 3711360 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 41.0 | 2.96e-01 | 85.9% | 45.3% |
| 3967125 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 45.0 | 3.80e-01 | 95.7% | 80.6% |
| 3183677 | 523.1.1.3 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › PF29994 | 0.52 | 42.0 | 4.06e-01 | 100.0% | 77.3% |
| 3696871 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 46.0 | 3.18e-01 | 100.0% | 46.0% |
| 4959122 | 223.1.1.27 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 | 0.51 | 32.0 | 2.85e-01 | 83.7% | 43.7% |
| 3450141 | 283.2.1.8 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 | 0.51 | 42.0 | 4.20e-01 | 100.0% | 88.0% |
| 3966741 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 42.0 | 2.93e-01 | 93.5% | 93.8% |
| 3788663 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.50 | 42.0 | 3.10e-01 | 92.4% | 34.0% |
| 3501270 | 2004.1.1.114 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MukB,SbcC_Walker_B | 0.50 | 41.0 | 2.70e-01 | 90.2% | 58.4% |
| 5068562 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.50 | 40.0 | 3.33e-01 | 89.1% | 54.3% |