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S27_BME27_629333_prodigal-single.1__X__X__00323
Bact-VirS27_BME27_629333_prodigal-single.1__X__X__00323
Identity
- Kingdom:
- phage
Quality
66.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-64
Domain cluster:
rep: MF668280.1__ASZ74799.1__SEA_PHABBA_262__00224__D26-84
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xmjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 48.0 | 4.52e-01 | 88.2% | 61.9% |
| 6lpnA04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 47.0 | 3.92e-01 | 86.3% | 44.2% |
| 5ajiB03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 47.0 | 4.00e-01 | 86.3% | 52.6% |
| 4mt1A07 | 3.30.70.1440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.63 | 48.0 | 3.96e-01 | 86.3% | 51.0% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 51.0 | 4.27e-01 | 100.0% | 52.6% |
| 3pm9A04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 46.0 | 3.98e-01 | 86.3% | 51.7% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.60 | 44.0 | 3.79e-01 | 78.4% | 53.7% |
| 1q8bA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 46.0 | 3.91e-01 | 88.2% | 53.8% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.59 | 44.0 | 3.35e-01 | 84.3% | 34.3% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 43.0 | 3.65e-01 | 86.3% | 50.0% |
| 7sk7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.58 | 48.0 | 3.19e-01 | 100.0% | 35.6% |
| 4g1uD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 40.0 | 2.56e-01 | 72.5% | 49.0% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.58 | 44.0 | 3.98e-01 | 84.3% | 96.1% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.57 | 46.0 | 4.15e-01 | 100.0% | 91.5% |
| 4dn9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 42.0 | 3.54e-01 | 86.3% | 45.4% |
| 1e7uA04 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.56 | 45.0 | 3.32e-01 | 96.1% | 44.9% |
| 7cunF01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.56 | 41.0 | 2.69e-01 | 80.4% | 80.7% |
| 3bm7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 42.0 | 3.48e-01 | 88.2% | 48.1% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 41.0 | 3.49e-01 | 86.3% | 48.5% |
| 6ahuH01 | 3.30.70.3250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribonuclease P, Pop5 subunit | 0.55 | 43.0 | 3.59e-01 | 86.3% | 54.7% |
| 1k8kA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.55 | 39.0 | 3.18e-01 | 74.5% | 67.4% |
| 5o5cB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 48.0 | 3.60e-01 | 100.0% | 43.8% |
| 1s28A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 39.0 | 2.93e-01 | 76.5% | 40.8% |
| 2e29A01 | 3.30.70.2280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 41.0 | 3.75e-01 | 88.2% | 59.2% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.54 | 39.0 | 3.41e-01 | 86.3% | 50.0% |
| 1jrmA00 | 3.30.1200.10 | Alpha Beta › 2-Layer Sandwich › Conserved Hypothetical Protein Mth637; Chain: A; › YggU-like | 0.54 | 40.0 | 3.34e-01 | 88.2% | 74.0% |
| 1odfA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 2.80e-01 | 94.1% | 68.6% |
| 6k3lB02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 44.0 | 3.77e-01 | 100.0% | 68.1% |
| 8gf5C01 | 3.30.70.470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 39.0 | 3.07e-01 | 90.2% | 53.5% |
| 2jisA01 | 3.90.1150.170 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.53 | 46.0 | 2.98e-01 | 100.0% | 33.1% |
| 3ef0A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 39.0 | 2.64e-01 | 86.3% | 54.9% |
| 3rgfA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 41.0 | 3.55e-01 | 100.0% | 66.7% |
| 4d9uA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 42.0 | 3.66e-01 | 100.0% | 67.0% |
| 4i98C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 44.0 | 3.92e-01 | 100.0% | 80.0% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 38.0 | 3.21e-01 | 88.2% | 49.0% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4466962 | 2007.1.4.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › PFK | 0.70 | 47.0 | 3.18e-01 | 74.5% | 18.9% |
| 3264579 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.67 | 52.0 | 4.07e-01 | 88.2% | 47.8% |
| 3806501 | 387.1.5.18 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › AtDEF-like | 0.66 | 46.0 | 4.85e-01 | 84.3% | 86.7% |
| 3234730 | 387.1.7.1 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Evasin-3 knottin scaffold › Lustrin_cystein | 0.65 | 38.0 | 4.30e-01 | 84.3% | 82.9% |
| 185044 | 304.61.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aldoxime dehydratase › Aldoxime dehydratase › Dehydratase_hem | 0.65 | 50.0 | 3.73e-01 | 86.3% | 38.7% |
| 151816 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.64 | 48.0 | 3.97e-01 | 86.3% | 49.5% |
| 2845594 | 304.61.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aldoxime dehydratase › Aldoxime dehydratase › Dehydratase_hem | 0.60 | 46.0 | 3.60e-01 | 86.3% | 41.7% |
| 3786625 | 109.4.1.165 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dsl1_C | 0.60 | 47.0 | 2.66e-01 | 84.3% | 16.2% |
| 4968326 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.60 | 45.0 | 3.88e-01 | 86.3% | 50.6% |
| 2028124 | 223.3.1.8 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 | 0.59 | 41.0 | 4.39e-01 | 76.5% | 86.4% |
| 4207299 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.58 | 42.0 | 3.81e-01 | 86.3% | 54.7% |
| 4048122 | 304.9.1.71 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD | 0.58 | 45.0 | 3.45e-01 | 88.2% | 36.9% |
| 3512515 | 247.1.1.45 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, RMMBL, Lactamase_B_2 | 0.58 | 45.0 | 2.75e-01 | 84.3% | 76.6% |
| 4532008 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 42.0 | 2.44e-01 | 78.4% | 26.9% |
| 3413369 | 304.151.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase | 0.58 | 45.0 | 3.51e-01 | 92.2% | 50.8% |
| 3392026 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.58 | 42.0 | 2.63e-01 | 84.3% | 58.6% |
| 4256196 | 387.1.5.3 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Toxin_3 | 0.57 | 43.0 | 4.09e-01 | 88.2% | 80.0% |
| 3233189 | 304.57.1.0 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like | 0.57 | 44.0 | 3.58e-01 | 88.2% | 47.6% |
| 3612861 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 40.0 | 3.24e-01 | 76.5% | 85.7% |
| 3522185 | 3016.1.1.4 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Pyridoxal_deC | 0.57 | 46.0 | 3.66e-01 | 100.0% | 55.2% |
| 5046329 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 41.0 | 3.61e-01 | 84.3% | 50.6% |
| 4176189 | 304.52.1.1 ↗ | a+b two layers › Alpha-beta plaits › YbeD/HP0495-like › YbeD/HP0495-like › DUF493 | 0.56 | 42.0 | 3.66e-01 | 86.3% | 51.8% |
| 6911 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.56 | 38.0 | 3.13e-01 | 72.5% | 40.2% |
| 3616045 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.54 | 37.0 | 3.41e-01 | 86.3% | 52.9% |
| 4010403 | 310.3.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM | 0.54 | 46.0 | 3.86e-01 | 100.0% | 62.4% |
| 4929992 | 873.1.1.20 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › DUF6125 | 0.54 | 42.0 | 3.21e-01 | 100.0% | 47.5% |
| 3489471 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.54 | 47.0 | 3.18e-01 | 100.0% | 84.6% |
| 3931872 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 38.0 | 2.31e-01 | 74.5% | 33.8% |
| 3692980 | 304.9.1.40 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › BRAP2 | 0.53 | 41.0 | 3.16e-01 | 90.2% | 70.4% |
| 3212521 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 45.0 | 2.78e-01 | 100.0% | 30.6% |
| 3860615 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.53 | 42.0 | 3.51e-01 | 92.2% | 82.0% |
| 3211001 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.53 | 41.0 | 3.52e-01 | 90.2% | 82.2% |
| 3535703 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.52 | 42.0 | 3.43e-01 | 92.2% | 80.0% |
| 1505442 | 223.3.1.8 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 | 0.50 | 34.0 | 3.43e-01 | 76.5% | 69.6% |