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S27_BME27_629333_prodigal-single.1__X__X__00361

Bact-Vir

S27_BME27_629333_prodigal-single.1__X__X__00361

Identity

Kingdom:
phage

Quality

88.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-75
PDB
Domain cluster: representative
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 66.0 6.53e-01 100.0% 91.2%
4a6fA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.72 60.0 5.21e-01 93.9% 96.2%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 58.0 6.09e-01 100.0% 98.3%
1r77A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 62.0 5.39e-01 98.5% 78.8%
2mk5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 62.0 4.90e-01 98.5% 61.8%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 55.0 5.43e-01 100.0% 82.9%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 55.0 5.74e-01 98.5% 96.7%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 53.0 5.67e-01 92.4% 100.0%
5yv7A00 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.67 36.0 3.81e-01 83.3% 58.3%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 55.0 5.52e-01 100.0% 89.6%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 55.0 5.76e-01 95.5% 100.0%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 52.0 5.37e-01 100.0% 96.7%
2dn6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 53.0 4.53e-01 93.9% 86.1%
2h6cA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 50.0 4.07e-01 100.0% 44.2%
6b9tF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 46.0 4.00e-01 100.0% 47.7%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 51.0 4.20e-01 93.9% 76.1%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 51.0 4.79e-01 100.0% 72.8%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 55.0 5.28e-01 100.0% 85.3%
3ht1A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 47.0 3.68e-01 100.0% 37.3%
6q61A00 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.63 35.0 3.68e-01 81.8% 59.3%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.62 49.0 4.39e-01 100.0% 61.1%
5u55A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 48.0 3.97e-01 100.0% 46.7%
6b9tF01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 47.0 3.91e-01 100.0% 45.6%
4bd9B01 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.60 33.0 3.64e-01 83.3% 64.8%
1e54A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.60 42.0 2.75e-01 75.8% 97.9%
2pqqA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 49.0 3.79e-01 100.0% 40.8%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.58 49.0 4.86e-01 97.0% 93.0%
8h68A01 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.58 48.0 3.39e-01 100.0% 28.2%
2fqpA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 44.0 4.04e-01 100.0% 60.0%
4lejA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 44.0 3.33e-01 100.0% 31.5%
1cauA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 44.0 3.29e-01 100.0% 30.9%
5cadA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 44.0 3.22e-01 100.0% 29.0%
2bnmA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 44.0 3.72e-01 100.0% 47.5%
6l4cA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 43.0 3.24e-01 100.0% 30.4%
4o9gA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 42.0 3.47e-01 100.0% 39.9%
1uijB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 43.0 3.32e-01 100.0% 33.9%
4mloA01 2.60.120.810 Mainly Beta › Sandwich › Jelly Rolls › 0.57 42.0 3.31e-01 100.0% 34.6%
4avaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 46.0 3.68e-01 100.0% 43.1%
1j3qB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 42.0 3.20e-01 100.0% 30.6%
3hwuA00 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.56 48.0 3.83e-01 100.0% 55.6%
3s7iB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 42.0 3.14e-01 100.0% 30.3%
5yl6A01 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.55 48.0 3.59e-01 100.0% 42.6%
2vqaC01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 42.0 3.18e-01 100.0% 31.6%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.55 48.0 3.86e-01 98.5% 93.9%
4immA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 41.0 2.61e-01 93.9% 16.0%
5wxuA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 47.0 3.60e-01 100.0% 46.9%
4yrdA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 42.0 3.61e-01 100.0% 49.6%
3on7B00 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.55 47.0 3.17e-01 100.0% 25.9%
5by5A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 38.0 3.37e-01 100.0% 45.2%
4lejA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 46.0 3.51e-01 100.0% 48.5%
5xyib00 2.20.25.100 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 0.54 40.0 3.70e-01 78.8% 67.1%
4mzuF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 45.0 3.60e-01 100.0% 51.4%
6l9iA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 45.0 3.38e-01 100.0% 42.8%
5tpvB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 45.0 3.63e-01 100.0% 55.1%
4lxqB00 3.40.50.12230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 42.0 2.79e-01 90.9% 25.2%
4ksnA00 6.20.250.80 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.51 37.0 3.81e-01 78.8% 87.7%
6zgqA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.51 39.0 3.11e-01 86.4% 99.3%
7vt4A01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.51 44.0 3.61e-01 100.0% 96.9%
4d8mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 44.0 3.29e-01 98.5% 73.5%
2qjvA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 43.0 3.39e-01 100.0% 60.0%
2zuoA09 2.30.30.570 Mainly Beta › Roll › SH3 type barrels. › 0.50 39.0 4.04e-01 93.9% 93.7%
3gldA02 2.60.40.1140 Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain 0.50 42.0 3.45e-01 100.0% 68.4%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 43.0 2.74e-01 93.9% 19.6%
4eq3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 36.0 3.13e-01 77.3% 92.6%
2vqaA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 42.0 3.20e-01 100.0% 44.1%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1545880 4.1.1.278 beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd 0.77 65.0 6.15e-01 100.0% 77.5%
4118226 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 52.0 5.15e-01 100.0% 70.0%
4264671 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 51.0 4.81e-01 100.0% 61.3%
3396896 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 59.0 5.68e-01 95.5% 78.7%
4207556 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.69 62.0 6.10e-01 100.0% 98.6%
3579483 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.68 58.0 5.38e-01 95.5% 98.8%
3216321 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.65 45.0 4.18e-01 84.8% 56.5%
3282870 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.65 47.0 3.70e-01 100.0% 35.9%
3386424 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.64 49.0 4.46e-01 100.0% 61.1%
2157748 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.64 46.0 3.62e-01 100.0% 34.7%
4014171 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.64 48.0 3.46e-01 100.0% 27.7%
3386756 10.13.1.1 beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.63 44.0 3.80e-01 100.0% 44.5%
None 0.63 47.0 3.52e-01 100.0% 31.0%
3477037 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 55.0 5.45e-01 100.0% 91.4%
3898170 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.62 56.0 5.35e-01 100.0% 93.3%
4019005 10.12.1.30 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 3-HAO 0.62 46.0 4.18e-01 100.0% 56.8%
2149195 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.62 48.0 3.63e-01 100.0% 33.7%
3398613 384.1.1.1 few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI 0.62 36.0 4.03e-01 84.8% 76.0%
3788339 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.62 49.0 3.80e-01 100.0% 38.6%
4662228 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.61 48.0 3.88e-01 100.0% 43.8%
5027590 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.61 48.0 3.86e-01 100.0% 43.0%
3723454 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.61 46.0 3.59e-01 100.0% 35.0%
4201125 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.61 48.0 3.74e-01 100.0% 38.1%
None 0.61 47.0 3.68e-01 100.0% 38.0%
3394790 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 53.0 4.05e-01 100.0% 51.6%
3172856 5.1.4.575 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30290 0.60 49.0 3.24e-01 89.4% 97.9%
None 0.60 47.0 3.64e-01 100.0% 38.0%
3282947 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.60 48.0 4.23e-01 100.0% 58.0%
3595061 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.60 47.0 3.71e-01 100.0% 40.3%
3761318 4.1.1.253 beta barrels › SH3 › SH3 › SH3 › DUF4537 0.60 47.0 4.63e-01 100.0% 81.4%
2845210 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.60 47.0 3.75e-01 100.0% 41.4%
5058198 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.60 45.0 3.76e-01 100.0% 44.8%
3969691 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.59 44.0 3.43e-01 100.0% 33.3%
3747717 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.59 46.0 3.11e-01 100.0% 21.9%
4862637 10.12.1.29 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CDO_I 0.59 44.0 3.59e-01 100.0% 39.9%
3408923 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.59 45.0 3.49e-01 100.0% 34.8%
3798341 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.59 43.0 3.06e-01 100.0% 23.7%
3949750 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.59 46.0 3.65e-01 100.0% 39.3%
3736744 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 47.0 3.85e-01 93.9% 87.1%
3989970 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 45.0 4.58e-01 93.9% 90.8%
4947623 268.1.1.0 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.57 43.0 3.79e-01 81.8% 75.0%
4577896 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.57 44.0 3.89e-01 100.0% 54.6%
3929996 10.12.1.97 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CNBH_CNNM2_C 0.56 49.0 3.64e-01 100.0% 45.1%
3834078 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.56 42.0 3.13e-01 100.0% 28.7%
1874927 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.56 42.0 3.33e-01 100.0% 37.1%
4093923 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.55 41.0 4.36e-01 93.9% 98.2%
3642320 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.54 47.0 3.15e-01 100.0% 25.2%
None 0.54 41.0 3.05e-01 100.0% 29.2%
3367533 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.53 40.0 2.99e-01 100.0% 28.5%
3732029 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.53 45.0 2.84e-01 100.0% 19.2%
3655985 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.53 44.0 3.68e-01 98.5% 60.8%
3467072 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.53 44.0 3.24e-01 100.0% 38.5%
4152523 11.1.1.129 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind 0.53 37.0 3.36e-01 77.3% 94.0%
3999787 11.1.4.98 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Ig_NOMO 0.52 42.0 4.02e-01 90.9% 87.5%
None 0.52 44.0 2.76e-01 100.0% 65.6%
3597361 4.23.1.0 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like 0.52 44.0 3.65e-01 100.0% 61.5%
3363456 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.52 43.0 3.61e-01 98.5% 58.4%
3691764 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.51 43.0 2.72e-01 100.0% 58.4%
1891431 9.1.1.28 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Pallilysin 0.51 41.0 3.33e-01 87.9% 56.0%
3700518 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.51 43.0 3.59e-01 100.0% 61.5%
4342482 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 44.0 3.97e-01 98.5% 93.7%
None 0.51 42.0 3.03e-01 100.0% 33.6%
426018 5.1.4.27 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 43.0 2.73e-01 93.9% 19.3%