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S27_BME27_629333_prodigal-single.1__X__X__00403
Bact-VirS27_BME27_629333_prodigal-single.1__X__X__00403
Identity
- Kingdom:
- phage
Quality
71.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 49-118
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3it8D01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.71 | 63.0 | 4.65e-01 | 100.0% | 41.1% |
| 3dnsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 55.0 | 4.55e-01 | 100.0% | 55.7% |
| 2bskB00 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.63 | 39.0 | 4.11e-01 | 91.4% | 69.2% |
| 3d3sA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 55.0 | 4.25e-01 | 100.0% | 62.9% |
| 4kvxA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 53.0 | 4.22e-01 | 98.6% | 67.8% |
| 4y2fA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.62 | 53.0 | 4.31e-01 | 100.0% | 97.2% |
| 4gw9A01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.62 | 53.0 | 3.82e-01 | 98.6% | 83.7% |
| 4e0aA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 53.0 | 4.14e-01 | 98.6% | 76.9% |
| 6baoA03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.61 | 53.0 | 4.20e-01 | 100.0% | 96.7% |
| 4boqA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.61 | 44.0 | 3.34e-01 | 77.1% | 95.4% |
| 3lo7A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.61 | 45.0 | 3.91e-01 | 81.4% | 58.6% |
| 3eeaA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.61 | 50.0 | 3.97e-01 | 94.3% | 94.8% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.60 | 48.0 | 4.04e-01 | 91.4% | 53.1% |
| 3v89A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 41.0 | 2.39e-01 | 70.0% | 22.7% |
| 1mtpA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.60 | 41.0 | 3.87e-01 | 82.9% | 57.1% |
| 2pkdA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 42.0 | 3.72e-01 | 95.7% | 52.3% |
| 4mboA01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 44.0 | 3.49e-01 | 91.4% | 39.1% |
| 3oovA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.57 | 50.0 | 3.88e-01 | 100.0% | 99.4% |
| 1jyaB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.57 | 44.0 | 3.76e-01 | 87.1% | 52.1% |
| 7o85C01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 39.0 | 3.86e-01 | 84.3% | 67.5% |
| 1r57A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 45.0 | 4.05e-01 | 100.0% | 64.7% |
| 2ft0A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 46.0 | 3.28e-01 | 95.7% | 48.2% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 48.0 | 4.17e-01 | 100.0% | 82.4% |
| 4yy8A02 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.54 | 42.0 | 2.86e-01 | 88.6% | 38.3% |
| 2kheA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.54 | 31.0 | 2.92e-01 | 91.4% | 42.7% |
| 3irpX01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 43.0 | 3.49e-01 | 92.9% | 57.9% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.53 | 39.0 | 2.78e-01 | 77.1% | 90.0% |
| 4jonC00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.53 | 44.0 | 3.77e-01 | 94.3% | 75.4% |
| 1lgpA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.53 | 38.0 | 3.27e-01 | 75.7% | 57.5% |
| 1st8A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.52 | 43.0 | 3.25e-01 | 95.7% | 82.6% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 43.0 | 2.86e-01 | 98.6% | 88.3% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 43.0 | 2.79e-01 | 91.4% | 53.0% |
| 1u04A04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 40.0 | 2.95e-01 | 88.6% | 36.2% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 45.0 | 2.93e-01 | 100.0% | 36.5% |
| 2b5nB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 40.0 | 2.70e-01 | 88.6% | 41.1% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.51 | 41.0 | 2.68e-01 | 91.4% | 41.9% |
| 7qzqA01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.51 | 40.0 | 2.72e-01 | 92.9% | 96.7% |
| 2zwaA02 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.51 | 40.0 | 2.74e-01 | 92.9% | 88.2% |
| 1lc0A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 41.0 | 3.41e-01 | 97.1% | 61.2% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.51 | 42.0 | 2.98e-01 | 94.3% | 78.7% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.51 | 30.0 | 3.29e-01 | 78.6% | 70.2% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 44.0 | 2.80e-01 | 100.0% | 20.7% |
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.50 | 39.0 | 2.85e-01 | 82.9% | 73.5% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3263745 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.70 | 56.0 | 4.33e-01 | 95.7% | 38.4% |
| 3987339 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.69 | 60.0 | 4.67e-01 | 98.6% | 99.4% |
| 5074996 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.68 | 61.0 | 4.59e-01 | 100.0% | 95.9% |
| 3596980 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.68 | 56.0 | 3.97e-01 | 90.0% | 82.4% |
| 3653236 | 3347.1.1.0 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 | 0.67 | 57.0 | 4.43e-01 | 95.7% | 81.6% |
| 5075159 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.66 | 58.0 | 4.35e-01 | 97.1% | 95.8% |
| 4363805 | 292.2.1.9 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_4 | 0.66 | 57.0 | 5.29e-01 | 100.0% | 94.4% |
| 5047489 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.65 | 56.0 | 4.08e-01 | 100.0% | 33.7% |
| 3840029 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.65 | 54.0 | 4.59e-01 | 91.4% | 91.3% |
| 4016769 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.64 | 56.0 | 4.03e-01 | 98.6% | 64.5% |
| 5060111 | 206.1.3.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N | 0.62 | 55.0 | 3.43e-01 | 98.6% | 81.3% |
| 4973990 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.62 | 54.0 | 3.48e-01 | 97.1% | 82.5% |
| 4163835 | 11.1.5.56 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Zona_CL1 | 0.61 | 46.0 | 3.71e-01 | 90.0% | 40.0% |
| 3196407 | 7026.1.1.5 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD | 0.60 | 45.0 | 3.10e-01 | 80.0% | 48.4% |
| 4941331 | 213.1.1.31 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 | 0.60 | 50.0 | 4.18e-01 | 94.3% | 68.0% |
| 4311698 | 241.2.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › PF26204 | 0.58 | 42.0 | 3.69e-01 | 78.6% | 62.7% |
| 4987009 | 3837.1.1.1 ↗ | alpha bundles › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › DUF6847 | 0.57 | 39.0 | 3.02e-01 | 95.7% | 32.7% |
| 4982249 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.57 | 45.0 | 4.18e-01 | 91.4% | 85.3% |
| 3623319 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.56 | 43.0 | 4.18e-01 | 100.0% | 76.2% |
| 4423905 | 4051.1.1.8 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › PF26204 | 0.55 | 41.0 | 2.96e-01 | 81.4% | 30.9% |
| 3789242 | 7525.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 | 0.55 | 36.0 | 2.46e-01 | 91.4% | 18.8% |
| None | — | 0.55 | 46.0 | 3.12e-01 | 100.0% | 61.6% | |
| 3585029 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.54 | 45.0 | 2.59e-01 | 100.0% | 15.9% |
| 3562933 | 198.1.1.4 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › DUF3456 | 0.54 | 49.0 | 3.74e-01 | 100.0% | 80.6% |
| 3477177 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 47.0 | 3.95e-01 | 100.0% | 74.2% |
| 3717146 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 42.0 | 2.59e-01 | 90.0% | 37.0% |
| 5081573 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.52 | 41.0 | 2.92e-01 | 88.6% | 39.6% |
| 3501741 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.52 | 31.0 | 3.28e-01 | 88.6% | 66.7% |
| 2989643 | 5.1.3.154 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF30361 | 0.52 | 43.0 | 2.85e-01 | 98.6% | 87.5% |
| 5068890 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.52 | 40.0 | 2.89e-01 | 88.6% | 39.6% |
| 3212583 | 76.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I | 0.52 | 39.0 | 3.57e-01 | 88.6% | 59.0% |
| 3272675 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.52 | 43.0 | 3.04e-01 | 100.0% | 65.4% |
| 3657616 | 880.1.1.1 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind | 0.52 | 43.0 | 2.68e-01 | 98.6% | 47.8% |
| 3506749 | 633.21.1.23 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 | 0.52 | 46.0 | 3.51e-01 | 100.0% | 70.3% |
| 3550161 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.52 | 40.0 | 3.28e-01 | 87.1% | 75.4% |
| 4968408 | 2003.1.2.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox | 0.51 | 32.0 | 2.73e-01 | 97.1% | 36.7% |
| 4155318 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.51 | 42.0 | 2.77e-01 | 92.9% | 76.7% |
| 3281283 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.51 | 40.0 | 2.82e-01 | 94.3% | 88.4% |
| 5047406 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.51 | 39.0 | 2.85e-01 | 87.1% | 42.3% |
| 3992554 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.51 | 36.0 | 2.54e-01 | 78.6% | 87.0% |
| 3589527 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.50 | 46.0 | 2.90e-01 | 100.0% | 32.1% |
| 3944564 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.50 | 41.0 | 2.41e-01 | 100.0% | 14.4% |
| 3055858 | 2007.1.1.18 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DUF4960 | 0.50 | 38.0 | 2.65e-01 | 82.9% | 47.3% |
| 4945025 | 2484.4.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like | 0.50 | 39.0 | 3.42e-01 | 85.7% | 93.6% |
| 3254115 | 5.1.4.56 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NUP214 | 0.50 | 38.0 | 2.45e-01 | 88.6% | 82.9% |
| 2057235 | 4312.1.1.5 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › RelE | 0.50 | 40.0 | 3.52e-01 | 88.6% | 95.4% |
| 3917408 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 43.0 | 3.74e-01 | 94.3% | 75.2% |