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S27_BME27_629333_prodigal-single.1__X__X__00439

Bact-Vir

S27_BME27_629333_prodigal-single.1__X__X__00439

Identity

Kingdom:
phage

Quality

87.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-75
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.78 59.0 6.05e-01 98.4% 83.3%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.73 59.0 5.80e-01 100.0% 82.1%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 59.0 5.33e-01 100.0% 66.3%
2vc8A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 61.0 5.83e-01 100.0% 80.6%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.70 52.0 5.55e-01 96.8% 98.0%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 49.0 5.42e-01 93.5% 100.0%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 49.0 5.32e-01 98.4% 98.0%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 48.0 4.76e-01 88.7% 75.4%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 51.0 5.11e-01 100.0% 87.1%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 4.89e-01 100.0% 69.0%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 5.03e-01 88.7% 100.0%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 46.0 4.76e-01 93.5% 84.7%
4c0fC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.62 50.0 4.13e-01 88.7% 50.9%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.62 54.0 4.29e-01 100.0% 63.2%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 44.0 4.54e-01 87.1% 81.4%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 51.0 4.45e-01 100.0% 66.3%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 51.0 4.32e-01 96.8% 86.1%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 44.0 4.57e-01 91.9% 87.5%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.61 48.0 3.45e-01 88.7% 29.8%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 51.0 5.02e-01 98.4% 88.1%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 51.0 4.92e-01 98.4% 86.1%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 48.0 4.78e-01 98.4% 86.2%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 4.39e-01 95.2% 75.0%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.85e-01 95.2% 100.0%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 45.0 3.97e-01 96.8% 53.0%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.46e-01 95.2% 81.0%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.59 51.0 3.59e-01 100.0% 29.1%
3wodG00 2.30.30.1250 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 3.66e-01 87.1% 54.3%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 51.0 4.79e-01 100.0% 85.5%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.58 45.0 3.90e-01 87.1% 85.0%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.57 47.0 4.14e-01 95.2% 62.9%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 44.0 3.23e-01 95.2% 97.6%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 41.0 3.87e-01 98.4% 65.0%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 44.0 3.72e-01 93.5% 82.0%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.54 41.0 3.86e-01 98.4% 65.8%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 42.0 4.25e-01 96.8% 90.3%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.52 44.0 3.14e-01 100.0% 37.4%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.52 43.0 3.29e-01 100.0% 66.9%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 40.0 2.91e-01 90.3% 69.0%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 43.0 3.64e-01 96.8% 88.2%
2w7qB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.51 44.0 3.24e-01 100.0% 76.1%
4aqcB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 36.0 3.29e-01 82.3% 88.5%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3286662 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.78 65.0 5.43e-01 100.0% 55.0%
4466506 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 68.0 6.38e-01 100.0% 80.0%
5006274 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.77 59.0 4.50e-01 100.0% 36.4%
3595833 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.75 66.0 5.74e-01 100.0% 64.2%
4660084 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.75 58.0 5.58e-01 100.0% 73.9%
3601070 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 64.0 6.36e-01 96.8% 90.8%
3492557 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.74 63.0 5.25e-01 100.0% 56.0%
3907190 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.74 63.0 5.37e-01 100.0% 60.0%
3709279 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 66.0 5.79e-01 100.0% 68.9%
4069560 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 63.0 5.95e-01 100.0% 80.0%
3819397 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.73 61.0 5.63e-01 100.0% 71.2%
4283343 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 66.0 6.01e-01 100.0% 80.0%
3689576 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 63.0 4.73e-01 100.0% 51.0%
3619619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 55.0 5.29e-01 100.0% 74.3%
5043132 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.71 63.0 5.66e-01 100.0% 71.8%
3595169 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 62.0 5.96e-01 100.0% 91.4%
4162968 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 63.0 5.84e-01 100.0% 79.7%
3721787 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 63.0 5.67e-01 100.0% 77.6%
5027789 4.1.1.30 beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.70 61.0 5.23e-01 100.0% 75.0%
4982722 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.70 61.0 5.46e-01 100.0% 70.6%
3597690 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 56.0 5.38e-01 100.0% 78.6%
3999725 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 51.0 4.66e-01 100.0% 58.8%
4251101 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 63.0 5.61e-01 100.0% 72.9%
4484974 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 62.0 5.57e-01 100.0% 72.9%
4596087 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 60.0 5.68e-01 98.4% 81.3%
3834112 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 59.0 5.50e-01 100.0% 92.5%
3368864 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 54.0 5.42e-01 96.8% 86.2%
5066224 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.68 53.0 4.73e-01 96.8% 60.0%
3587337 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.68 52.0 3.99e-01 95.2% 35.3%
4358168 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 61.0 5.01e-01 100.0% 56.4%
3600139 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 60.0 4.96e-01 100.0% 61.8%
4524466 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.67 50.0 4.82e-01 100.0% 71.4%
3525406 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.66 49.0 4.10e-01 100.0% 45.5%
5032809 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.66 51.0 4.10e-01 96.8% 41.5%
3313139 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.66 57.0 4.14e-01 98.4% 42.3%
4420173 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.66 49.0 4.64e-01 100.0% 66.7%
3342814 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.66 57.0 4.99e-01 100.0% 77.9%
3214653 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 56.0 4.89e-01 96.8% 94.7%
3579591 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.65 48.0 5.08e-01 93.5% 90.9%
3575253 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 50.0 4.89e-01 85.5% 82.9%
4581369 4.1.1.166 beta barrels › SH3 › SH3 › SH3 › DUF2314 0.65 57.0 4.83e-01 100.0% 61.9%
3407821 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 50.0 4.54e-01 100.0% 62.4%
3781440 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.65 53.0 4.99e-01 98.4% 73.8%
3587906 4.1.1.46 beta barrels › SH3 › SH3 › SH3 › VEG 0.64 55.0 5.07e-01 100.0% 75.0%
4105328 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.64 48.0 4.74e-01 91.9% 76.9%
4004815 4.1.1.166 beta barrels › SH3 › SH3 › SH3 › DUF2314 0.64 56.0 4.47e-01 100.0% 49.6%
147797 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.64 51.0 4.96e-01 100.0% 80.9%
3570368 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 48.0 4.17e-01 100.0% 52.0%
3645395 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 55.0 5.07e-01 98.4% 90.0%
3876680 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.63 52.0 4.47e-01 95.2% 57.0%
3617355 4.1.1.348 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor, SMN_YG-box 0.63 47.0 4.14e-01 91.9% 52.6%
3609629 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 46.0 4.10e-01 91.9% 52.6%
3785009 4.1.1.138 beta barrels › SH3 › SH3 › SH3 › Ski2_beta-barrel 0.63 55.0 4.39e-01 100.0% 65.4%
3377696 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.63 44.0 3.16e-01 98.4% 23.5%
3357709 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 54.0 4.95e-01 100.0% 76.5%
3901117 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.63 50.0 3.69e-01 91.9% 35.6%
3893808 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.62 51.0 3.31e-01 96.8% 29.4%
3910433 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 47.0 4.64e-01 95.2% 78.5%
3934655 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 54.0 4.86e-01 96.8% 97.6%
1527468 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.62 49.0 4.13e-01 100.0% 50.5%
3669494 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 52.0 4.00e-01 98.4% 41.3%
4565837 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.61 47.0 4.21e-01 98.4% 58.9%
3217770 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.05e-01 96.8% 53.0%
3792948 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 49.0 4.19e-01 95.2% 81.8%
3342793 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.60 51.0 3.69e-01 98.4% 34.2%
3301015 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.77e-01 100.0% 87.7%
3501337 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.60 50.0 4.67e-01 96.8% 85.0%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.93e-01 100.0% 98.3%
3625263 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 49.0 4.36e-01 100.0% 93.0%
3738641 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.59 47.0 4.46e-01 100.0% 74.7%
3251940 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.59 45.0 4.34e-01 98.4% 72.0%
3905549 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 45.0 3.84e-01 91.9% 49.5%
4183853 4.1.1.435 beta barrels › SH3 › SH3 › SH3 › PF29216 0.59 45.0 4.46e-01 95.2% 80.0%
3246086 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 48.0 4.27e-01 100.0% 62.1%
3730229 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.59 46.0 4.43e-01 100.0% 74.7%
3749631 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.58 46.0 3.89e-01 87.1% 70.5%
3482360 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.26e-01 95.2% 81.1%
4114121 4.1.1.52 beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.58 50.0 4.64e-01 100.0% 77.5%
4422252 4.1.1.455 beta barrels › SH3 › SH3 › SH3 › DSRB 0.57 45.0 4.62e-01 93.5% 95.0%
5080017 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.57 48.0 3.63e-01 98.4% 55.0%
3188712 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.56 49.0 4.23e-01 100.0% 73.0%
3492016 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.56 49.0 4.36e-01 100.0% 82.2%
2541236 3820.1.1.0 a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain 0.56 44.0 3.94e-01 91.9% 89.6%
3918299 4.1.1.376 beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th 0.55 43.0 4.23e-01 91.9% 78.6%
3656401 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 47.0 4.48e-01 98.4% 86.7%
5009577 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.54 40.0 3.21e-01 79.0% 92.8%
3658750 220.1.1.78 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.54 45.0 3.66e-01 96.8% 69.6%
3602511 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 39.0 3.81e-01 93.5% 81.4%