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S27_BME27_629333_prodigal-single.1__X__X__00472
Bact-VirS27_BME27_629333_prodigal-single.1__X__X__00472
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-186
Domain cluster:
rep: FN667788.1__CBJ93864.1__CPT_0055__00055__D7-157
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01966.29 best | HD | 42.4 | 1.10e-10 | 76.2% | 98.3% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pq7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.82 | 62.0 | 6.21e-01 | 99.4% | 75.7% |
| 1xx7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.72 | 59.0 | 5.88e-01 | 98.8% | 83.7% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.70 | 39.0 | 4.92e-01 | 95.2% | 92.8% |
| 3i7aA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.70 | 60.0 | 4.95e-01 | 98.2% | 54.1% |
| 1zklA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.68 | 64.0 | 5.06e-01 | 100.0% | 82.6% |
| 3dynA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.67 | 63.0 | 4.96e-01 | 100.0% | 68.0% |
| 2paqA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.66 | 54.0 | 5.38e-01 | 97.0% | 82.5% |
| 1zp2A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 37.0 | 4.37e-01 | 98.2% | 80.9% |
| 3tm8B00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.62 | 58.0 | 4.69e-01 | 99.4% | 62.9% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 34.0 | 4.35e-01 | 95.2% | 93.6% |
| 3mzoB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.62 | 55.0 | 5.07e-01 | 98.2% | 74.8% |
| 5tk8A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.62 | 54.0 | 5.19e-01 | 97.0% | 81.2% |
| 3kh1A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.60 | 56.0 | 5.30e-01 | 98.8% | 95.4% |
| 3p5nA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.60 | 43.0 | 4.34e-01 | 88.7% | 73.2% |
| 3gw7A00 | 1.10.3210.50 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.59 | 56.0 | 5.09e-01 | 100.0% | 93.0% |
| 2hfiA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.58 | 31.0 | 3.53e-01 | 81.5% | 67.5% |
| 4l3uA00 | 1.20.1480.40 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 | 0.57 | 35.0 | 3.99e-01 | 84.5% | 82.1% |
| 3psfA02 | 1.10.10.650 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RuvA domain 2-like | 0.54 | 34.0 | 3.64e-01 | 86.3% | 70.8% |
| 1wolA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.54 | 34.0 | 3.93e-01 | 77.4% | 86.9% |
| 5i1uA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 47.0 | 3.87e-01 | 100.0% | 72.3% |
| 4rflA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.51 | 46.0 | 4.33e-01 | 98.2% | 90.5% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.51 | 30.0 | 3.68e-01 | 82.7% | 93.3% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5052430 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.93 | 68.0 | 7.92e-01 | 85.7% | 100.0% |
| 4967136 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.87 | 84.0 | 7.78e-01 | 100.0% | 85.4% |
| 4951316 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.87 | 84.0 | 7.80e-01 | 100.0% | 86.0% |
| 5039974 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.86 | 83.0 | 7.66e-01 | 100.0% | 89.3% |
| 5054129 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.86 | 83.0 | 7.66e-01 | 100.0% | 86.2% |
| 4551179 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.85 | 81.0 | 7.42e-01 | 100.0% | 88.6% |
| 4217922 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.84 | 81.0 | 7.37e-01 | 100.0% | 88.6% |
| 5069793 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.84 | 80.0 | 7.48e-01 | 100.0% | 88.0% |
| 4932353 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.82 | 76.0 | 7.42e-01 | 99.4% | 89.4% |
| 4998970 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.82 | 73.0 | 7.27e-01 | 98.8% | 91.2% |
| 4977938 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.80 | 57.0 | 5.86e-01 | 83.3% | 75.6% |
| 5023893 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.80 | 77.0 | 6.72e-01 | 100.0% | 71.5% |
| 4942612 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.78 | 60.0 | 6.67e-01 | 97.0% | 98.5% |
| 4976091 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.72 | 61.0 | 5.88e-01 | 100.0% | 78.9% |
| 4511032 | 131.2.1.1 ↗ | alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › HD,PolyA_pol_RNAbd | 0.69 | 64.0 | 5.17e-01 | 98.2% | 57.3% |
| 4979677 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.68 | 60.0 | 5.85e-01 | 100.0% | 85.6% |
| 5024310 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.67 | 56.0 | 5.49e-01 | 96.4% | 81.7% |
| 5011113 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.66 | 55.0 | 5.46e-01 | 96.4% | 84.0% |
| 3970991 | 131.1.1.13 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_5 | 0.65 | 60.0 | 5.40e-01 | 100.0% | 77.4% |
| 4976483 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.63 | 58.0 | 5.51e-01 | 98.2% | 84.6% |
| 3971047 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.62 | 56.0 | 5.54e-01 | 98.8% | 98.9% |
| 137236 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.60 | 56.0 | 5.29e-01 | 98.8% | 94.9% |
| 3901204 | 101.1.10.18 ↗ | alpha arrays › HTH › HTH › Cyclin-like › BRF2-like_C_cyclin_rpt | 0.56 | 44.0 | 4.53e-01 | 100.0% | 87.5% |
| 3767389 | 101.1.10.18 ↗ | alpha arrays › HTH › HTH › Cyclin-like › BRF2-like_C_cyclin_rpt | 0.55 | 42.0 | 4.26e-01 | 98.2% | 80.6% |
| 3529162 | 601.1.1.53 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Keratin_assoc | 0.55 | 35.0 | 4.13e-01 | 72.6% | 93.9% |
| 3714282 | 5081.1.1.2 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DER1 | 0.51 | 40.0 | 3.87e-01 | 99.4% | 71.3% |