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S27_BME27_629333_prodigal-single.1__X__X__00509
Bact-VirS27_BME27_629333_prodigal-single.1__X__X__00509
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-15_94-178
Domain cluster:
representative
CATH (2)
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3603357 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 37.0 | 4.87e-01 | 94.8% | 85.5% |
| 3304627 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.64 | 34.0 | 4.36e-01 | 94.8% | 90.9% |
| 4172306 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.61 | 33.0 | 3.34e-01 | 94.8% | 53.7% |
| 3790978 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 35.0 | 4.12e-01 | 94.8% | 84.3% |
| 3332613 | 4.1.1.284 ↗ | beta barrels › SH3 › SH3 › SH3 › SBNO | 0.54 | 39.0 | 3.60e-01 | 99.0% | 59.2% |
| 4018760 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.53 | 32.0 | 3.56e-01 | 88.5% | 76.0% |
| 3224441 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 32.0 | 3.82e-01 | 99.0% | 88.2% |
| 4229837 | 4.1.1.354 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY, PF28930 | 0.52 | 37.0 | 3.01e-01 | 92.7% | 38.9% |
D2
high
residues 18-90
Domain cluster:
rep: AP018399.1__BBA65359.1__X__00211__D41-110
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 37.0 | 3.85e-01 | 84.9% | 55.9% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.68 | 34.0 | 3.99e-01 | 83.6% | 68.8% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 43.0 | 4.51e-01 | 95.9% | 72.7% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 37.0 | 4.00e-01 | 98.6% | 64.5% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 34.0 | 3.74e-01 | 84.9% | 60.0% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 38.0 | 3.93e-01 | 93.2% | 60.3% |
| 1eigA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 43.0 | 4.39e-01 | 89.0% | 68.5% |
| 2v1rA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 36.0 | 3.77e-01 | 83.6% | 58.2% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 35.0 | 3.59e-01 | 84.9% | 54.3% |
| 3d6wB02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.64 | 34.0 | 4.39e-01 | 80.8% | 97.4% |
| 7z0kB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 36.0 | 3.77e-01 | 87.7% | 64.1% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.60 | 31.0 | 3.18e-01 | 93.2% | 47.2% |
| 1ssfA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 32.0 | 3.61e-01 | 98.6% | 67.3% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 34.0 | 4.01e-01 | 98.6% | 84.0% |
| 2dk3A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 36.0 | 3.43e-01 | 87.7% | 52.3% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 33.0 | 3.85e-01 | 84.9% | 84.0% |
| 7prrB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 49.0 | 3.83e-01 | 100.0% | 69.8% |
| 3vn5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.55 | 29.0 | 3.01e-01 | 71.2% | 49.3% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 33.0 | 3.42e-01 | 94.5% | 62.9% |
| 1v57A03 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 43.0 | 3.55e-01 | 93.2% | 91.7% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.53 | 35.0 | 3.20e-01 | 100.0% | 49.5% |
| 3fm8D03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 38.0 | 3.38e-01 | 100.0% | 53.7% |
| 1sfnA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 43.0 | 3.09e-01 | 97.3% | 71.4% |
| 2in5A00 | 2.40.360.10 | Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like | 0.51 | 36.0 | 2.68e-01 | 75.3% | 82.6% |
| 1hxnA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.50 | 40.0 | 2.98e-01 | 90.4% | 86.2% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.50 | 35.0 | 3.70e-01 | 91.8% | 81.8% |
| 3g7sA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.50 | 38.0 | 2.44e-01 | 86.3% | 42.5% |
| 7r71A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.50 | 35.0 | 3.73e-01 | 98.6% | 85.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4043931 | 2.1.1.9 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e | 0.76 | 40.0 | 4.41e-01 | 100.0% | 61.7% |
| 4683204 | 101.35.1.5 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 | 0.73 | 41.0 | 3.64e-01 | 100.0% | 39.0% |
| 3218646 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 34.0 | 3.57e-01 | 76.7% | 49.2% |
| 3656232 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.71 | 35.0 | 4.26e-01 | 82.2% | 75.6% |
| 3553983 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.70 | 37.0 | 4.07e-01 | 84.9% | 61.7% |
| 4026678 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.68 | 38.0 | 3.89e-01 | 86.3% | 57.1% |
| 3037102 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 34.0 | 3.67e-01 | 83.6% | 56.5% |
| 4998989 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.63 | 31.0 | 2.10e-01 | 76.7% | 12.7% |
| 1884741 | 4.1.1.130 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_19 | 0.63 | 36.0 | 3.91e-01 | 86.3% | 67.8% |
| 3924808 | 719.2.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like | 0.62 | 30.0 | 2.95e-01 | 76.7% | 41.2% |
| 1837476 | 331.1.1.6 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 | 0.61 | 31.0 | 3.25e-01 | 91.8% | 49.3% |
| 3326980 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.60 | 33.0 | 3.60e-01 | 87.7% | 61.7% |
| 2512682 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.59 | 38.0 | 4.32e-01 | 91.8% | 89.1% |
| 3660244 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.57 | 42.0 | 4.18e-01 | 93.2% | 74.7% |
| 3363360 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.57 | 41.0 | 3.92e-01 | 93.2% | 64.7% |
| 4945208 | 301.13.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain | 0.55 | 46.0 | 3.92e-01 | 98.6% | 99.2% |
| 4940177 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 38.0 | 3.92e-01 | 100.0% | 77.1% |
| 4031410 | 4237.1.1.1 ↗ | beta barrels › FomD-like › FomD-like › FomD-like › DUF402 | 0.53 | 41.0 | 3.10e-01 | 83.6% | 83.3% |
| 3825395 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.51 | 39.0 | 4.01e-01 | 82.2% | 94.3% |
| None | — | 0.51 | 38.0 | 2.68e-01 | 83.6% | 90.5% | |
| 4019077 | 928.1.1.0 ↗ | few secondary structure elements › Bubble protein › Bubble protein › Bubble protein | 0.51 | 32.0 | 3.67e-01 | 94.5% | 94.0% |
| 3791863 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.51 | 37.0 | 2.43e-01 | 79.5% | 85.5% |
| 4425568 | 5.1.4.163 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vgb_lyase | 0.50 | 41.0 | 2.76e-01 | 91.8% | 79.3% |