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S27_BME27_629333_prodigal-single.1__X__X__00533

Bact-Vir

S27_BME27_629333_prodigal-single.1__X__X__00533

Identity

Kingdom:
phage

Quality

73.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 57-113
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.84 66.0 6.83e-01 100.0% 88.9%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 70.0 6.80e-01 100.0% 85.7%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 66.0 6.46e-01 100.0% 87.1%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 62.0 6.14e-01 100.0% 88.1%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.72 66.0 5.47e-01 100.0% 65.3%
4c0fC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.71 58.0 4.72e-01 93.0% 50.9%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 60.0 5.71e-01 94.7% 94.0%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 63.0 5.80e-01 100.0% 87.7%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.70 57.0 4.01e-01 93.0% 29.8%
4c0dC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.69 57.0 4.32e-01 93.0% 38.7%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 59.0 5.57e-01 94.7% 94.1%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.68 62.0 5.65e-01 100.0% 95.9%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 59.0 5.38e-01 94.7% 83.8%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 62.0 4.82e-01 100.0% 51.3%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 51.0 4.95e-01 89.5% 73.8%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 59.0 4.50e-01 100.0% 43.6%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.66 57.0 3.89e-01 100.0% 30.5%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.66 58.0 4.77e-01 100.0% 70.2%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 54.0 5.23e-01 100.0% 91.2%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 58.0 5.24e-01 98.2% 76.3%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 49.0 4.67e-01 84.2% 80.3%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 52.0 4.99e-01 100.0% 87.3%
3jb9H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 52.0 4.84e-01 100.0% 85.5%
5mkiH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 52.0 4.97e-01 100.0% 88.7%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 51.0 4.27e-01 93.0% 80.4%
6v4xC01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 51.0 4.44e-01 100.0% 61.0%
8eq1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.62 45.0 3.89e-01 100.0% 50.0%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 51.0 4.82e-01 94.7% 84.7%
6f2mA02 2.40.30.290 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 49.0 4.24e-01 100.0% 57.5%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 52.0 4.82e-01 100.0% 84.0%
6su1D01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.60 44.0 3.81e-01 98.2% 50.0%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 53.0 4.95e-01 100.0% 84.3%
4euuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 43.0 3.84e-01 87.7% 88.8%
3q90B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 45.0 3.57e-01 94.7% 83.1%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 46.0 4.42e-01 100.0% 84.1%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 42.0 2.89e-01 87.7% 75.0%
3nqzA01 3.10.450.490 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 40.0 3.53e-01 82.5% 62.6%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 43.0 4.22e-01 100.0% 86.4%
6bm0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 45.0 2.80e-01 96.5% 30.8%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 42.0 4.14e-01 91.2% 88.7%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.53 41.0 4.14e-01 87.7% 98.2%
7bspA01 2.70.150.10 Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A 0.52 39.0 3.11e-01 91.2% 78.3%
3cu3A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 42.0 3.14e-01 93.0% 69.8%
2plqA00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.51 38.0 2.41e-01 82.5% 19.7%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 4.04e-01 100.0% 92.1%
1oqwA00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.51 39.0 2.98e-01 86.0% 34.7%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.51 39.0 3.29e-01 91.2% 48.5%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3931905 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 68.0 5.28e-01 100.0% 47.0%
3598283 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 67.0 5.06e-01 100.0% 43.1%
3768742 4.1.1.355 ↗ beta barrels › SH3 › SH3 › SH3 › WAC_Acf1_DNA_bd 0.74 68.0 4.31e-01 100.0% 23.1%
3443078 4.1.1.330 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.74 67.0 4.67e-01 100.0% 36.0%
3707929 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 66.0 4.74e-01 100.0% 45.6%
3703932 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 65.0 6.46e-01 100.0% 93.3%
3782292 4.1.1.170 ↗ beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.73 66.0 5.84e-01 98.2% 85.0%
3476615 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 65.0 5.82e-01 100.0% 92.5%
3519380 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 61.0 5.47e-01 93.0% 82.5%
3790784 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.73 57.0 3.62e-01 98.2% 18.1%
3259841 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 62.0 5.75e-01 94.7% 92.9%
3791752 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 65.0 6.20e-01 100.0% 90.8%
3744711 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.71 59.0 4.19e-01 93.0% 32.9%
1108456 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.71 58.0 4.77e-01 93.0% 52.8%
3407209 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.71 59.0 4.17e-01 93.0% 32.6%
3739064 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 64.0 6.13e-01 100.0% 92.3%
3257276 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 61.0 4.65e-01 94.7% 49.6%
4020511 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 58.0 4.39e-01 93.0% 40.7%
1567496 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.70 61.0 6.12e-01 100.0% 96.5%
3784770 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.70 63.0 5.75e-01 100.0% 94.7%
3185321 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.70 63.0 5.71e-01 100.0% 88.0%
3719860 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 61.0 4.90e-01 100.0% 61.7%
4022025 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.69 62.0 4.60e-01 100.0% 45.5%
3824699 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 62.0 5.98e-01 100.0% 89.2%
3232582 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 60.0 5.13e-01 100.0% 63.2%
3630782 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.69 61.0 4.54e-01 100.0% 46.2%
4942589 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.67 60.0 5.61e-01 100.0% 87.1%
3585214 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 48.0 4.02e-01 89.5% 44.0%
3932647 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 59.0 5.17e-01 100.0% 71.8%
4015537 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 55.0 5.12e-01 100.0% 78.2%
2527304 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.66 59.0 5.77e-01 100.0% 93.4%
4936051 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.42e-01 94.7% 92.7%
3328647 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.65 58.0 5.06e-01 100.0% 70.6%
4519674 4.1.1.186 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5397 0.65 55.0 5.55e-01 100.0% 94.8%
3174858 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.64 51.0 3.71e-01 93.0% 31.7%
4981041 375.1.1.299 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.64 49.0 5.16e-01 84.2% 94.0%
4976092 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 55.0 4.82e-01 100.0% 66.7%
3657336 206.1.1.74 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr 0.63 42.0 2.67e-01 80.7% 13.0%
4358168 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 54.0 4.41e-01 100.0% 58.2%
None — 0.63 49.0 3.00e-01 100.0% 14.1%
4954224 4.1.1.182 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2097 0.63 55.0 4.66e-01 100.0% 69.5%
3918299 4.1.1.376 ↗ beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th 0.62 54.0 5.13e-01 100.0% 85.7%
3593314 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 50.0 4.63e-01 100.0% 77.5%
4461872 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 49.0 4.25e-01 93.0% 64.2%
3712122 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.61 50.0 4.54e-01 100.0% 72.9%
3254881 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.81e-01 100.0% 94.7%
3772638 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.60 50.0 4.58e-01 100.0% 72.8%
4073200 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 51.0 4.93e-01 100.0% 89.2%
5053224 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 5.02e-01 98.2% 98.3%
1557343 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.60 53.0 4.95e-01 100.0% 84.3%
4851967 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.59 52.0 5.10e-01 100.0% 95.2%
5041149 4.26.1.9 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › CPxCG_zf 0.58 42.0 4.55e-01 77.2% 100.0%
3478244 7512.1.1.66 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Exostosin_GT47 0.58 52.0 3.55e-01 100.0% 48.2%
3561132 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.57 46.0 2.68e-01 96.5% 37.4%
4931072 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.56 47.0 4.49e-01 100.0% 82.9%
3483489 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 47.0 4.42e-01 100.0% 77.3%
3306779 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.56 47.0 4.62e-01 100.0% 87.7%
3265170 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.56 47.0 4.56e-01 100.0% 87.7%
4419948 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.56 46.0 4.51e-01 100.0% 87.7%
5067458 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 45.0 4.62e-01 93.0% 98.2%
4158157 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.55 45.0 4.42e-01 100.0% 89.2%
3229389 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.55 45.0 2.83e-01 96.5% 26.5%
3178505 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.53 41.0 3.38e-01 89.5% 96.5%
3791918 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 43.0 3.02e-01 100.0% 63.1%
3649691 2004.1.1.299 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF1995 0.53 43.0 2.92e-01 96.5% 36.4%
4946993 4.1.1.479 ↗ beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.52 42.0 4.06e-01 100.0% 84.3%
3518499 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 42.0 2.75e-01 93.0% 39.3%
3262823 109.21.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain 0.51 41.0 2.31e-01 91.2% 18.4%
5038625 5.1.4.87 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD 0.51 42.0 2.52e-01 96.5% 27.8%
3643549 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.51 42.0 3.85e-01 98.2% 73.8%
4064998 236.1.1.1 ↗ beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.51 38.0 2.85e-01 86.0% 75.9%