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S27_BME27_629333_prodigal-single.1__X__X__00538
Bact-VirS27_BME27_629333_prodigal-single.1__X__X__00538
Identity
- Kingdom:
- phage
Quality
93.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-67
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a0bA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.76 | 56.0 | 4.52e-01 | 76.9% | 44.9% |
| 1sr2A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.75 | 57.0 | 4.66e-01 | 80.0% | 57.8% |
| 2qsbA00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.70 | 60.0 | 5.59e-01 | 100.0% | 90.6% |
| 3u61D03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.65 | 47.0 | 4.31e-01 | 80.0% | 69.2% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 44.0 | 3.22e-01 | 72.3% | 95.3% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.63 | 54.0 | 4.60e-01 | 98.5% | 85.1% |
| 6he1B01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.63 | 43.0 | 4.34e-01 | 70.8% | 95.3% |
| 1itxA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 46.0 | 2.91e-01 | 80.0% | 54.9% |
| 1dd9A03 | 1.20.50.20 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle | 0.61 | 44.0 | 4.53e-01 | 76.9% | 100.0% |
| 3gw4A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 48.0 | 3.46e-01 | 92.3% | 42.2% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 40.0 | 3.84e-01 | 73.8% | 80.3% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.57 | 32.0 | 3.68e-01 | 90.8% | 77.8% |
| 3hzrA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.56 | 42.0 | 3.59e-01 | 81.5% | 61.3% |
| 2n1rA00 | 1.10.150.90 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 | 0.55 | 48.0 | 3.88e-01 | 100.0% | 73.9% |
| 4c1uA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 41.0 | 2.98e-01 | 86.2% | 73.5% |
| 7xcnM01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.53 | 38.0 | 3.61e-01 | 76.9% | 98.7% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.52 | 43.0 | 3.93e-01 | 96.9% | 69.9% |
| 1wvtA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.51 | 43.0 | 3.43e-01 | 100.0% | 76.4% |
| 3bh1A02 | 1.20.1570.10 | Mainly Alpha › Up-down Bundle › dip2346 fold › dip2346 domain like | 0.51 | 44.0 | 3.89e-01 | 100.0% | 84.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4049578 | 633.12.1.1 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 | 0.73 | 64.0 | 5.84e-01 | 100.0% | 81.8% |
| 4956583 | 633.12.1.1 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 | 0.73 | 64.0 | 5.73e-01 | 100.0% | 80.9% |
| 4281149 | 633.12.1.1 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 | 0.73 | 64.0 | 5.69e-01 | 100.0% | 80.0% |
| 5059804 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.72 | 63.0 | 5.39e-01 | 100.0% | 91.4% |
| 4932900 | 633.12.1.1 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 | 0.71 | 62.0 | 5.56e-01 | 100.0% | 74.2% |
| 5055634 | 633.12.1.1 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 | 0.70 | 60.0 | 5.65e-01 | 100.0% | 98.8% |
| 4344658 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.69 | 58.0 | 3.57e-01 | 96.9% | 23.5% |
| 5065130 | 633.12.1.0 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like | 0.67 | 57.0 | 5.30e-01 | 100.0% | 91.8% |
| 3734270 | 7579.1.1.32 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › FrsA-like | 0.66 | 56.0 | 3.46e-01 | 98.5% | 23.5% |
| 3224417 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.66 | 56.0 | 4.82e-01 | 100.0% | 88.2% |
| 3182404 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.65 | 55.0 | 3.42e-01 | 98.5% | 23.9% |
| 3315406 | 110.1.1.32 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › SecA_SW | 0.64 | 54.0 | 4.58e-01 | 96.9% | 76.5% |
| 3708255 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 43.0 | 4.17e-01 | 81.5% | 61.3% |
| 3977737 | 3831.1.1.1 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI | 0.59 | 43.0 | 3.73e-01 | 81.5% | 77.4% |
| 3291693 | 150.1.2.13 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Haem_oxygenas_2 | 0.59 | 49.0 | 3.47e-01 | 96.9% | 70.9% |
| 4664977 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.58 | 40.0 | 3.43e-01 | 98.5% | 45.2% |
| 3318340 | 7516.1.1.39 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › STELLO | 0.56 | 49.0 | 3.04e-01 | 100.0% | 25.7% |
| 3959695 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.55 | 40.0 | 3.17e-01 | 80.0% | 40.0% |
| 5058985 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.54 | 46.0 | 3.54e-01 | 96.9% | 80.6% |
| 4956041 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.54 | 44.0 | 3.76e-01 | 100.0% | 76.8% |
| 4223629 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.51 | 44.0 | 3.11e-01 | 100.0% | 90.9% |