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S2_003_000_R3_scaffold_4_prodigal-single.1__X__X__00110
Bact-VirS2_003_000_R3_scaffold_4_prodigal-single.1__X__X__00110
Identity
- Kingdom:
- phage
Quality
69.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 612-723
Domain cluster:
rep: IMGVR_UViG_3300015214_002962-3300015214-Ga0172382_100065621__D24-131
CATH (89)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c7fA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.74 | 67.0 | 6.12e-01 | 96.4% | 95.1% |
| 2cdoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.74 | 66.0 | 6.13e-01 | 97.3% | 100.0% |
| 1w0nA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.74 | 66.0 | 6.43e-01 | 96.4% | 100.0% |
| 1w9sA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.73 | 66.0 | 6.20e-01 | 97.3% | 97.8% |
| 2x29A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 5.95e-01 | 100.0% | 91.7% |
| 4jdmA03 | 2.60.120.1340 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 66.0 | 5.93e-01 | 100.0% | 92.9% |
| 3eb7A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.72 | 65.0 | 5.70e-01 | 98.2% | 87.2% |
| 3ks7A01 | 2.60.120.1570 | Mainly Beta › Sandwich › Jelly Rolls › Peptide-N-glycosidase F, N-terminal domain | 0.72 | 65.0 | 5.29e-01 | 100.0% | 93.4% |
| 1rj8A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 65.0 | 6.03e-01 | 99.1% | 97.9% |
| 1od3A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.72 | 64.0 | 6.10e-01 | 96.4% | 95.4% |
| 2w3jA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.71 | 64.0 | 6.00e-01 | 98.2% | 94.9% |
| 3jqwC00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 58.0 | 5.67e-01 | 97.3% | 81.8% |
| 1pk6C00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 64.0 | 6.09e-01 | 99.1% | 98.4% |
| 1yi9A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 63.0 | 5.85e-01 | 97.3% | 78.8% |
| 2w5fB01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.70 | 64.0 | 5.78e-01 | 100.0% | 98.0% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.70 | 54.0 | 5.69e-01 | 100.0% | 93.9% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 63.0 | 6.01e-01 | 100.0% | 98.5% |
| 4f3jA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 63.0 | 5.82e-01 | 99.1% | 93.0% |
| 1f15B00 | 2.60.120.530 | Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A | 0.70 | 62.0 | 5.27e-01 | 100.0% | 74.2% |
| 3zm8A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.70 | 63.0 | 6.07e-01 | 99.1% | 98.4% |
| 4d7yA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 62.0 | 5.95e-01 | 99.1% | 99.2% |
| 7ehgC01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.69 | 61.0 | 5.89e-01 | 97.3% | 100.0% |
| 1o91A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 62.0 | 5.88e-01 | 98.2% | 98.5% |
| 4kq7A01 | 2.60.120.1390 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 | 0.69 | 62.0 | 5.50e-01 | 100.0% | 87.0% |
| 5h4cB00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 62.0 | 5.81e-01 | 99.1% | 97.8% |
| 3wnoA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.68 | 60.0 | 5.72e-01 | 96.4% | 98.5% |
| 1pmiA03 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 50.0 | 4.94e-01 | 100.0% | 72.3% |
| 5x7qA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.68 | 59.0 | 5.68e-01 | 94.6% | 100.0% |
| 6a48A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.68 | 60.0 | 5.53e-01 | 98.2% | 100.0% |
| 4ht1T00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 61.0 | 5.85e-01 | 100.0% | 100.0% |
| 6ovbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.68 | 61.0 | 5.52e-01 | 100.0% | 89.6% |
| 2q1fA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.68 | 60.0 | 5.24e-01 | 97.3% | 89.8% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 60.0 | 5.35e-01 | 100.0% | 97.6% |
| 5f7uA06 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.67 | 59.0 | 5.72e-01 | 96.4% | 100.0% |
| 4d8mA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.67 | 60.0 | 5.27e-01 | 100.0% | 83.5% |
| 7k7jA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.67 | 58.0 | 5.07e-01 | 97.3% | 100.0% |
| 4qpwA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.67 | 59.0 | 5.44e-01 | 97.3% | 97.9% |
| 7bysA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 57.0 | 5.55e-01 | 93.8% | 100.0% |
| 5mqcB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 59.0 | 4.70e-01 | 100.0% | 71.0% |
| 4qawH03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 59.0 | 5.61e-01 | 100.0% | 97.8% |
| 4llfD01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 59.0 | 5.09e-01 | 100.0% | 89.3% |
| 4lhsA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 59.0 | 5.41e-01 | 99.1% | 95.3% |
| 2zxqA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.66 | 56.0 | 5.06e-01 | 95.5% | 96.9% |
| 2gu9A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 45.0 | 4.68e-01 | 100.0% | 76.7% |
| 2bv4A00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.66 | 52.0 | 5.21e-01 | 83.9% | 99.1% |
| 4d0qA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 58.0 | 5.17e-01 | 99.1% | 97.5% |
| 8hhvA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 54.0 | 5.25e-01 | 91.1% | 83.6% |
| 2dduA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 57.0 | 5.13e-01 | 99.1% | 98.1% |
| 2vqaC01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 46.0 | 3.96e-01 | 100.0% | 47.5% |
| 3a21A03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 52.0 | 5.44e-01 | 99.1% | 99.0% |
| 1tg7A05 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 55.0 | 4.76e-01 | 95.5% | 65.9% |
| 1tg7A04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 57.0 | 4.96e-01 | 100.0% | 86.5% |
| 6l9iA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 45.0 | 3.83e-01 | 100.0% | 45.6% |
| 1o4tA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 44.0 | 4.37e-01 | 100.0% | 69.6% |
| 4yarA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 42.0 | 4.10e-01 | 100.0% | 61.8% |
| 1j3qB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 48.0 | 4.13e-01 | 100.0% | 50.8% |
| 1sppB00 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.62 | 49.0 | 4.99e-01 | 97.3% | 86.6% |
| 3h7jA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 43.0 | 4.28e-01 | 100.0% | 69.3% |
| 2waaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 55.0 | 5.42e-01 | 100.0% | 94.3% |
| 4es8B01 | 2.60.120.1240 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 55.0 | 4.61e-01 | 100.0% | 99.5% |
| 1oq1B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 54.0 | 4.41e-01 | 99.1% | 98.2% |
| 2oa2A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 45.0 | 4.39e-01 | 100.0% | 70.2% |
| 1sefA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 43.0 | 4.11e-01 | 100.0% | 61.8% |
| 1ohfA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 54.0 | 4.02e-01 | 100.0% | 88.9% |
| 3winE03 | 2.60.120.1090 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 52.0 | 5.29e-01 | 98.2% | 97.3% |
| 4mloA01 | 2.60.120.810 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 43.0 | 3.88e-01 | 100.0% | 52.8% |
| 3demA03 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.60 | 50.0 | 5.07e-01 | 99.1% | 92.1% |
| 1gqgC02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 43.0 | 3.65e-01 | 100.0% | 45.0% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 52.0 | 3.87e-01 | 100.0% | 74.9% |
| 6b9tF02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 41.0 | 4.15e-01 | 100.0% | 72.5% |
| 2okxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 51.0 | 4.27e-01 | 97.3% | 56.3% |
| 3g7dA03 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 46.0 | 4.50e-01 | 98.2% | 78.2% |
| 2bnmA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 42.0 | 4.12e-01 | 97.3% | 70.8% |
| 2wjsA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 48.0 | 4.32e-01 | 93.8% | 87.0% |
| 3c12A02 | 2.60.40.4070 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 42.0 | 4.62e-01 | 86.6% | 100.0% |
| 6gh3A01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.57 | 46.0 | 3.37e-01 | 88.4% | 66.4% |
| 2xbzA00 | 2.60.40.2380 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 47.0 | 4.55e-01 | 95.5% | 98.5% |
| 6v46A02 | 3.90.209.20 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain | 0.56 | 50.0 | 4.03e-01 | 100.0% | 65.5% |
| 2wr1A02 | 3.90.209.20 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain | 0.56 | 50.0 | 4.04e-01 | 100.0% | 65.6% |
| 1zvfB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 37.0 | 3.34e-01 | 100.0% | 48.2% |
| 3pl0B00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.54 | 45.0 | 3.55e-01 | 100.0% | 41.3% |
| 3emrA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.54 | 48.0 | 3.65e-01 | 100.0% | 48.2% |
| 4f23A02 | 3.90.209.20 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain | 0.54 | 48.0 | 3.91e-01 | 100.0% | 65.3% |
| 2xdvA01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.53 | 44.0 | 3.75e-01 | 100.0% | 52.3% |
| 2xlgA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 43.0 | 3.43e-01 | 100.0% | 43.2% |
| 2opwA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.52 | 46.0 | 3.51e-01 | 100.0% | 46.9% |
| 3ww3A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 45.0 | 3.58e-01 | 100.0% | 50.8% |
| 2y0oA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 43.0 | 3.81e-01 | 95.5% | 73.7% |
| 3d0jA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 38.0 | 3.58e-01 | 98.2% | 64.5% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5038687 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.76 | 63.0 | 6.62e-01 | 97.3% | 100.0% |
| 5041113 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.75 | 57.0 | 6.26e-01 | 88.4% | 100.0% |
| 4948691 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.75 | 62.0 | 6.52e-01 | 98.2% | 100.0% |
| 4366770 | 10.32.1.12 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 | 0.74 | 66.0 | 6.18e-01 | 96.4% | 97.8% |
| 2700769 | 10.32.1.12 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 | 0.74 | 67.0 | 6.53e-01 | 99.1% | 99.2% |
| 4416110 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.74 | 65.0 | 6.42e-01 | 99.1% | 90.0% |
| 5045833 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.73 | 59.0 | 6.10e-01 | 97.3% | 93.3% |
| 2417794 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.73 | 59.0 | 5.70e-01 | 97.3% | 77.6% |
| 4646750 | 10.32.1.12 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 | 0.72 | 65.0 | 6.28e-01 | 98.2% | 98.4% |
| 170073 | 10.32.1.12 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 | 0.72 | 65.0 | 6.05e-01 | 99.1% | 94.9% |
| 3484974 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.71 | 65.0 | 6.05e-01 | 100.0% | 96.4% |
| 3768503 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.71 | 64.0 | 5.89e-01 | 99.1% | 89.7% |
| 3879619 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.71 | 64.0 | 5.82e-01 | 99.1% | 86.7% |
| 3483295 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.71 | 65.0 | 5.92e-01 | 100.0% | 91.7% |
| 5039364 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.71 | 54.0 | 5.87e-01 | 83.9% | 98.9% |
| 5019286 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.71 | 55.0 | 5.83e-01 | 98.2% | 94.0% |
| 4035909 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.71 | 64.0 | 6.05e-01 | 100.0% | 94.8% |
| 3902170 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.71 | 64.0 | 6.21e-01 | 99.1% | 99.2% |
| 3901741 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.71 | 64.0 | 5.92e-01 | 100.0% | 93.8% |
| 3573400 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.70 | 64.0 | 5.90e-01 | 100.0% | 93.7% |
| 5040182 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.70 | 63.0 | 6.35e-01 | 99.1% | 99.1% |
| 5037623 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.70 | 60.0 | 6.19e-01 | 97.3% | 100.0% |
| 2723157 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.70 | 60.0 | 5.58e-01 | 92.9% | 77.1% |
| 4015064 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.70 | 63.0 | 6.06e-01 | 99.1% | 96.9% |
| 3883934 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.70 | 63.0 | 5.49e-01 | 99.1% | 78.2% |
| 5024539 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.70 | 63.0 | 5.95e-01 | 100.0% | 91.1% |
| 3611465 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.70 | 63.0 | 5.87e-01 | 99.1% | 95.0% |
| 3908103 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.70 | 64.0 | 6.07e-01 | 100.0% | 100.0% |
| 3731894 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.70 | 57.0 | 6.02e-01 | 96.4% | 99.0% |
| 3593920 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.70 | 63.0 | 6.19e-01 | 99.1% | 99.2% |
| 3537016 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.69 | 62.0 | 5.99e-01 | 97.3% | 99.2% |
| 4945197 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.69 | 61.0 | 5.66e-01 | 96.4% | 100.0% |
| 4593672 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.69 | 62.0 | 5.56e-01 | 100.0% | 96.1% |
| 5039047 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.69 | 63.0 | 6.26e-01 | 100.0% | 100.0% |
| 4954606 | 10.1.2.186 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › DUF3344 | 0.69 | 60.0 | 5.77e-01 | 100.0% | 83.1% |
| 3908506 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.69 | 62.0 | 5.77e-01 | 100.0% | 95.0% |
| 3745246 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.69 | 62.0 | 5.72e-01 | 100.0% | 92.3% |
| 5042255 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.69 | 62.0 | 5.83e-01 | 100.0% | 99.3% |
| 4972682 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.68 | 56.0 | 5.81e-01 | 97.3% | 96.2% |
| 4947720 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.68 | 62.0 | 5.38e-01 | 100.0% | 90.0% |
| 1762256 | 10.32.1.51 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_35 | 0.68 | 59.0 | 5.64e-01 | 96.4% | 97.0% |
| 4575485 | 10.32.1.51 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_35 | 0.68 | 60.0 | 5.85e-01 | 98.2% | 99.2% |
| 5046630 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.68 | 60.0 | 5.99e-01 | 99.1% | 94.8% |
| 2595135 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.68 | 60.0 | 5.71e-01 | 97.3% | 96.9% |
| 4242187 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.68 | 59.0 | 5.88e-01 | 100.0% | 92.2% |
| 3252754 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.68 | 62.0 | 5.88e-01 | 100.0% | 96.2% |
| 2647299 | 10.32.1.52 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GH115_C | 0.67 | 60.0 | 5.07e-01 | 98.2% | 84.9% |
| 3914412 | 10.2.1.31 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin | 0.67 | 57.0 | 5.75e-01 | 100.0% | 93.6% |
| 4546057 | 10.32.1.12 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 | 0.67 | 59.0 | 5.61e-01 | 97.3% | 94.1% |
| 3663362 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 61.0 | 5.41e-01 | 100.0% | 94.4% |
| 4993515 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.67 | 61.0 | 5.31e-01 | 100.0% | 80.0% |
| 3705883 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 60.0 | 5.35e-01 | 99.1% | 90.6% |
| 4124871 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 57.0 | 5.55e-01 | 92.9% | 100.0% |
| 4021603 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 60.0 | 5.74e-01 | 99.1% | 99.2% |
| 4945026 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.67 | 59.0 | 5.96e-01 | 100.0% | 99.1% |
| 5027316 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.67 | 59.0 | 5.29e-01 | 97.3% | 100.0% |
| 3841027 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.67 | 60.0 | 5.41e-01 | 100.0% | 94.8% |
| 5059835 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.67 | 60.0 | 5.76e-01 | 100.0% | 89.9% |
| 3948789 | 10.32.1.51 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_35 | 0.66 | 58.0 | 5.52e-01 | 98.2% | 96.3% |
| 3348556 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.66 | 60.0 | 5.06e-01 | 100.0% | 87.6% |
| 3953594 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 59.0 | 4.83e-01 | 99.1% | 69.5% |
| 5037835 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 57.0 | 5.56e-01 | 95.5% | 100.0% |
| 3213513 | 10.32.1.218 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 | 0.66 | 59.0 | 5.89e-01 | 99.1% | 98.3% |
| 5041320 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 55.0 | 5.71e-01 | 99.1% | 99.0% |
| 3894461 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.66 | 58.0 | 4.94e-01 | 100.0% | 94.7% |
| 3172077 | 10.32.1.238 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29980 | 0.66 | 58.0 | 5.38e-01 | 99.1% | 89.7% |
| 4030891 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 58.0 | 5.45e-01 | 98.2% | 98.5% |
| 3806164 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.65 | 59.0 | 4.99e-01 | 100.0% | 87.0% |
| 4172901 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 57.0 | 5.69e-01 | 99.1% | 94.8% |
| 3265262 | 10.32.1.56 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CE2_N | 0.65 | 58.0 | 5.57e-01 | 100.0% | 93.1% |
| 5081344 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.64 | 55.0 | 4.78e-01 | 95.5% | 98.9% |
| 4615128 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 57.0 | 5.17e-01 | 98.2% | 96.7% |
| 3243572 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.64 | 57.0 | 5.25e-01 | 99.1% | 95.2% |
| 3178394 | 10.32.1.175 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Rax2_3 | 0.64 | 56.0 | 4.93e-01 | 100.0% | 94.9% |
| 4092778 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 55.0 | 5.29e-01 | 95.5% | 97.7% |
| 3429419 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.64 | 57.0 | 4.86e-01 | 100.0% | 86.5% |
| 3504271 | 10.32.1.73 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 | 0.64 | 54.0 | 5.05e-01 | 93.8% | 74.8% |
| 3246388 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 55.0 | 5.39e-01 | 99.1% | 89.1% |
| 3223483 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.63 | 56.0 | 4.98e-01 | 99.1% | 100.0% |
| 4277317 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 57.0 | 5.36e-01 | 100.0% | 88.9% |
| 4028658 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.63 | 45.0 | 4.15e-01 | 100.0% | 57.2% |
| 5045352 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 53.0 | 5.44e-01 | 99.1% | 100.0% |
| 1621265 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.63 | 56.0 | 3.91e-01 | 100.0% | 33.1% |
| 3256150 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.63 | 53.0 | 5.33e-01 | 97.3% | 92.2% |
| 4952405 | 10.1.2.194 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Lectin_like | 0.62 | 48.0 | 5.20e-01 | 86.6% | 97.9% |
| 3538225 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.62 | 55.0 | 4.90e-01 | 100.0% | 98.8% |
| 3233895 | 10.32.1.218 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 | 0.61 | 46.0 | 4.99e-01 | 82.1% | 100.0% |
| 3479505 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.60 | 54.0 | 4.87e-01 | 100.0% | 83.2% |
| 3974326 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.60 | 43.0 | 4.20e-01 | 100.0% | 66.4% |
| 5004968 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 47.0 | 4.50e-01 | 100.0% | 72.3% |
| 1298682 | 10.32.1.168 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › HA70_C | 0.60 | 52.0 | 4.91e-01 | 98.2% | 79.9% |
| 3796900 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 53.0 | 5.23e-01 | 99.1% | 93.3% |
| 3932193 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.59 | 51.0 | 4.75e-01 | 97.3% | 75.2% |
| 1498219 | 10.32.1.79 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › RhaB_D2 | 0.59 | 50.0 | 4.34e-01 | 96.4% | 59.6% |
| 3522661 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.57 | 50.0 | 4.77e-01 | 100.0% | 91.9% |
| 3275307 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.57 | 50.0 | 5.02e-01 | 98.2% | 97.4% |
| 3972900 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.56 | 39.0 | 3.64e-01 | 97.3% | 55.3% |
| 4962366 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.55 | 40.0 | 3.96e-01 | 98.2% | 73.9% |
| 3721047 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.52 | 44.0 | 3.63e-01 | 96.4% | 72.7% |
D2
medium
residues 42-84
Domain cluster:
rep: DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00096__D27-76
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n3fA01 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.79 | 65.0 | 6.55e-01 | 100.0% | 95.3% |
| 1yu0A01 | 2.10.10.30 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.73 | 59.0 | 5.66e-01 | 100.0% | 78.4% |
| 1h9oA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.72 | 61.0 | 4.60e-01 | 100.0% | 43.5% |
| 2cs0A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.69 | 56.0 | 4.52e-01 | 100.0% | 50.5% |
| 2jroA01 | 3.30.1910.10 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › so0334 like domain | 0.68 | 56.0 | 5.00e-01 | 100.0% | 64.6% |
| 5swcD00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.68 | 58.0 | 3.77e-01 | 100.0% | 52.4% |
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.66 | 55.0 | 4.14e-01 | 100.0% | 39.5% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.66 | 52.0 | 4.22e-01 | 100.0% | 49.5% |
| 2xp1A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.64 | 54.0 | 4.31e-01 | 100.0% | 47.4% |
| 2xi5A00 | 3.40.91.60 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.63 | 48.0 | 3.17e-01 | 83.7% | 27.2% |
| 1ym5A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.62 | 50.0 | 3.70e-01 | 100.0% | 61.0% |
| 4dunA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.62 | 48.0 | 3.71e-01 | 100.0% | 59.1% |
| 3i8nB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.60 | 48.0 | 3.65e-01 | 100.0% | 49.2% |
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.60 | 46.0 | 4.59e-01 | 95.3% | 97.8% |
| 1bwzA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.60 | 48.0 | 3.61e-01 | 100.0% | 66.9% |
| 1k8kA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.59 | 40.0 | 3.33e-01 | 74.4% | 62.0% |
| 1itxA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.59 | 43.0 | 3.65e-01 | 79.1% | 83.6% |
| 3weeB03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.59 | 42.0 | 3.27e-01 | 83.7% | 57.4% |
| 3kxrA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.59 | 49.0 | 3.61e-01 | 100.0% | 47.6% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.56 | 39.0 | 3.75e-01 | 81.4% | 71.9% |
| 3oymA01 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.54 | 38.0 | 2.97e-01 | 100.0% | 34.4% |
| 6l1kA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 40.0 | 2.84e-01 | 93.0% | 55.0% |
| 2qvwD02 | 2.170.260.10 | Mainly Beta › Beta Complex › paz domain › paz domain | 0.53 | 44.0 | 3.36e-01 | 97.7% | 70.9% |
| 3luuA00 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.50 | 36.0 | 3.05e-01 | 86.0% | 80.9% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3528795 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.92 | 75.0 | 7.46e-01 | 100.0% | 84.4% |
| 3405960 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.89 | 78.0 | 7.84e-01 | 100.0% | 95.3% |
| 3623217 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.86 | 74.0 | 7.02e-01 | 100.0% | 82.0% |
| 3498702 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.84 | 71.0 | 7.07e-01 | 95.3% | 93.3% |
| 2495545 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.82 | 66.0 | 3.71e-01 | 100.0% | 8.6% |
| 4025635 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.75 | 65.0 | 4.25e-01 | 100.0% | 23.4% |
| 3514344 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.73 | 61.0 | 4.59e-01 | 100.0% | 43.5% |
| 4183753 | 4126.1.1.6 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › DabA | 0.72 | 61.0 | 3.82e-01 | 100.0% | 20.2% |
| 3935342 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.72 | 60.0 | 4.53e-01 | 100.0% | 40.9% |
| 3798324 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.71 | 59.0 | 4.23e-01 | 100.0% | 34.3% |
| 3501098 | 4126.1.1.1 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › Pro_CA | 0.71 | 60.0 | 3.76e-01 | 100.0% | 51.8% |
| 3545467 | 391.1.2.10 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_1st | 0.70 | 48.0 | 4.90e-01 | 86.0% | 77.5% |
| 3590787 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.68 | 53.0 | 4.53e-01 | 88.4% | 63.5% |
| 3923314 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.68 | 51.0 | 3.19e-01 | 83.7% | 26.9% |
| 3518947 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.66 | 54.0 | 4.06e-01 | 100.0% | 37.5% |
| 4927153 | 375.1.1.63 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular | 0.65 | 50.0 | 4.73e-01 | 88.4% | 69.1% |
| 4578847 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.65 | 55.0 | 3.26e-01 | 100.0% | 17.7% |
| 3988985 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.65 | 49.0 | 3.77e-01 | 83.7% | 58.0% |
| 4971260 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 49.0 | 3.63e-01 | 88.4% | 36.9% |
| 3987255 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.64 | 48.0 | 3.03e-01 | 83.7% | 23.7% |
| 3517650 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.64 | 52.0 | 4.17e-01 | 100.0% | 50.0% |
| 2905173 | 3761.1.1.1 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N | 0.64 | 52.0 | 4.96e-01 | 100.0% | 81.5% |
| 4177319 | 3585.1.1.1 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA_pol_IIIA_C | 0.64 | 52.0 | 4.25e-01 | 93.0% | 56.5% |
| 3995595 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.64 | 53.0 | 3.82e-01 | 100.0% | 34.1% |
| 3988987 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.63 | 48.0 | 3.73e-01 | 86.0% | 57.0% |
| 4969440 | 7528.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II | 0.62 | 49.0 | 3.93e-01 | 100.0% | 78.1% |
| 2088430 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.62 | 48.0 | 4.52e-01 | 100.0% | 78.7% |
| 5056648 | 7528.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II | 0.61 | 48.0 | 3.86e-01 | 97.7% | 80.0% |
| 4027092 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.59 | 46.0 | 3.69e-01 | 100.0% | 80.0% |
| 4968925 | 375.1.1.356 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF29210 | 0.59 | 43.0 | 4.45e-01 | 88.4% | 87.5% |
| 3407204 | 2007.1.16.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 | 0.59 | 45.0 | 3.48e-01 | 88.4% | 33.9% |
| 1824581 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.57 | 41.0 | 2.96e-01 | 86.0% | 88.8% |
| 4955137 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.56 | 44.0 | 3.02e-01 | 95.3% | 32.8% |
| 3392026 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.56 | 43.0 | 2.60e-01 | 90.7% | 38.9% |
| 5079183 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.56 | 42.0 | 2.81e-01 | 93.0% | 26.8% |
| 3306545 | 331.2.1.8 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › CPSF73-100_C | 0.55 | 40.0 | 3.20e-01 | 79.1% | 51.8% |
| 4927267 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.54 | 43.0 | 4.25e-01 | 90.7% | 97.8% |
| 3806422 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.54 | 39.0 | 3.15e-01 | 79.1% | 51.8% |
| 4890655 | 5001.1.1.199 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › GPR158_179_EC | 0.54 | 41.0 | 3.12e-01 | 97.7% | 48.5% |
| 4957382 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.53 | 39.0 | 3.19e-01 | 88.4% | 88.0% |
| 3790194 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.53 | 42.0 | 4.15e-01 | 86.0% | 100.0% |
| 3939202 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.51 | 39.0 | 3.53e-01 | 83.7% | 85.0% |
| 3211001 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.51 | 37.0 | 3.10e-01 | 86.0% | 75.6% |
D3
medium
residues 96-144
Domain cluster:
rep: OR515479.1__WNL63470.1__X__00194__D454-499
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02839.20 best | CBM_5_12 | 27.5 | 3.60e-06 | 85.7% | 97.7% |
D4
medium
residues 228-279
Domain cluster:
rep: OR515479.1__WNL63470.1__X__00194__D454-499
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wvvB01 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.85 | 72.0 | 7.52e-01 | 92.3% | 97.9% |
| 1goiB03 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.82 | 71.0 | 7.16e-01 | 92.3% | 94.1% |
| 2rtsA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.80 | 72.0 | 6.41e-01 | 100.0% | 91.8% |
| 1aiwA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.79 | 67.0 | 6.26e-01 | 90.4% | 90.3% |
| 1ed7A00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.79 | 58.0 | 6.11e-01 | 78.8% | 100.0% |
| 1yueA02 | 2.10.10.40 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.77 | 62.0 | 5.93e-01 | 88.5% | 98.4% |
| 3wx7A02 | 2.10.10.90 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.76 | 65.0 | 5.23e-01 | 92.3% | 52.6% |
| 3r90A00 | 3.10.400.20 | Alpha Beta › Roll › Sulfate adenylyltransferase › | 0.70 | 63.0 | 4.24e-01 | 100.0% | 53.0% |
| 1r3eA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.68 | 57.0 | 4.88e-01 | 94.2% | 91.7% |
| 4maaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 57.0 | 3.91e-01 | 96.2% | 32.4% |
| 3zv0C01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.64 | 52.0 | 3.78e-01 | 92.3% | 51.3% |
| 4m0hA01 | 2.60.120.1440 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 53.0 | 3.98e-01 | 98.1% | 45.3% |
| 1rznA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.63 | 54.0 | 3.95e-01 | 100.0% | 55.3% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 47.0 | 4.43e-01 | 78.8% | 72.6% |
| 2q07A03 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.57 | 44.0 | 4.19e-01 | 90.4% | 100.0% |
| 3kifD00 | 2.20.25.650 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Tachylectin-2-like | 0.57 | 44.0 | 3.66e-01 | 90.4% | 47.3% |
| 1d2mA02 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.54 | 38.0 | 3.54e-01 | 98.1% | 58.0% |
| 3hjhA02 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.53 | 39.0 | 3.39e-01 | 100.0% | 50.0% |
| 3vmaA03 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.51 | 40.0 | 3.40e-01 | 100.0% | 52.2% |
| 2zosB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 42.0 | 3.09e-01 | 98.1% | 40.9% |
| 3td9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 40.0 | 3.07e-01 | 100.0% | 83.4% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4307941 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.89 | 72.0 | 6.86e-01 | 86.5% | 100.0% |
| 4026053 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.87 | 64.0 | 7.20e-01 | 82.7% | 100.0% |
| 1322862 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.86 | 66.0 | 6.91e-01 | 82.7% | 97.9% |
| 5026481 | 64.3.1.3 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12_2 | 0.85 | 74.0 | 7.60e-01 | 96.2% | 96.0% |
| 1322863 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.84 | 64.0 | 6.80e-01 | 80.8% | 100.0% |
| 4110715 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.84 | 66.0 | 6.36e-01 | 84.6% | 81.4% |
| 4444075 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.84 | 65.0 | 7.08e-01 | 82.7% | 100.0% |
| 3971347 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.84 | 69.0 | 6.63e-01 | 88.5% | 86.2% |
| 2389402 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.83 | 71.0 | 7.08e-01 | 92.3% | 88.9% |
| 4009008 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.82 | 69.0 | 6.78e-01 | 90.4% | 100.0% |
| 1694867 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.81 | 65.0 | 6.51e-01 | 86.5% | 96.2% |
| 4009007 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.81 | 65.0 | 6.63e-01 | 86.5% | 96.0% |
| 4149799 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.81 | 62.0 | 6.36e-01 | 82.7% | 100.0% |
| 1291025 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.80 | 72.0 | 6.41e-01 | 100.0% | 91.8% |
| 3972100 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.79 | 70.0 | 6.49e-01 | 96.2% | 89.2% |
| 8553 | 64.3.1.3 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12_2 | 0.79 | 67.0 | 6.26e-01 | 90.4% | 90.3% |
| 2966957 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.79 | 62.0 | 5.13e-01 | 86.5% | 64.1% |
| 4009012 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.78 | 66.0 | 6.21e-01 | 94.2% | 85.9% |
| 4233290 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.78 | 65.0 | 6.60e-01 | 90.4% | 100.0% |
| 1002430 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.77 | 62.0 | 5.93e-01 | 88.5% | 98.4% |
| 3998974 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.77 | 48.0 | 5.67e-01 | 88.5% | 91.4% |
| 3981632 | 70.4.1.9 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_cement_2 | 0.74 | 49.0 | 5.50e-01 | 76.9% | 90.0% |
| 4996509 | 1.1.9.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 | 0.71 | 57.0 | 5.04e-01 | 88.5% | 100.0% |
| 4949393 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.66 | 54.0 | 4.54e-01 | 92.3% | 86.7% |
| 4945851 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.65 | 53.0 | 4.52e-01 | 94.2% | 86.7% |
| 4237852 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.63 | 47.0 | 3.07e-01 | 100.0% | 17.9% |
| 3924247 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.62 | 47.0 | 4.20e-01 | 82.7% | 62.7% |
| 5057186 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 50.0 | 4.16e-01 | 90.4% | 81.1% |
| 3279326 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.61 | 44.0 | 3.65e-01 | 76.9% | 100.0% |
| 3934136 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.61 | 53.0 | 3.68e-01 | 100.0% | 53.4% |
| 4962605 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.60 | 44.0 | 3.56e-01 | 76.9% | 64.2% |
| 4968353 | 1143.1.1.0 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit | 0.59 | 43.0 | 3.96e-01 | 80.8% | 65.7% |
| 5028251 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.58 | 50.0 | 3.98e-01 | 100.0% | 63.6% |
| 3248547 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 48.0 | 3.01e-01 | 94.2% | 39.3% |
| 169 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.57 | 44.0 | 4.19e-01 | 90.4% | 100.0% |
| 5012905 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 37.0 | 3.13e-01 | 78.8% | 38.9% |
| 5029179 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.56 | 46.0 | 3.76e-01 | 100.0% | 58.2% |
| None | — | 0.55 | 42.0 | 2.42e-01 | 100.0% | 7.5% | |
| 5001934 | 2004.1.1.554 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter | 0.55 | 42.0 | 2.50e-01 | 100.0% | 11.0% |
| 4594881 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.55 | 42.0 | 3.46e-01 | 90.4% | 77.3% |
| 3403321 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 40.0 | 2.44e-01 | 80.8% | 11.4% |
| 4135015 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.53 | 39.0 | 3.43e-01 | 100.0% | 50.0% |
| 3385224 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.53 | 43.0 | 3.48e-01 | 100.0% | 77.3% |
| 3649429 | 220.1.1.187 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › VPS13_C | 0.52 | 42.0 | 2.94e-01 | 90.4% | 47.6% |
| 3583260 | 220.1.1.187 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › VPS13_C | 0.51 | 41.0 | 3.28e-01 | 94.2% | 55.7% |
| 3472174 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 44.0 | 2.58e-01 | 96.2% | 67.8% |
| 4241771 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.50 | 43.0 | 2.81e-01 | 98.1% | 60.0% |
D5
medium
residues 280-329
Domain cluster:
rep: OR515479.1__WNL63470.1__X__00194__D454-499
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02839.20 best | CBM_5_12 | 29.4 | 9.00e-07 | 80.0% | 90.9% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wvvB01 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.90 | 77.0 | 7.90e-01 | 94.0% | 95.8% |
| 3wx7A02 | 2.10.10.90 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.89 | 75.0 | 5.90e-01 | 90.0% | 51.6% |
| 1goiB03 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.85 | 74.0 | 7.37e-01 | 94.0% | 92.2% |
| 2rtsA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.82 | 74.0 | 6.50e-01 | 100.0% | 90.4% |
| 1ed7A00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.81 | 63.0 | 6.57e-01 | 84.0% | 100.0% |
| 1aiwA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.80 | 68.0 | 6.29e-01 | 92.0% | 90.3% |
| 1yueA02 | 2.10.10.40 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.76 | 63.0 | 5.89e-01 | 92.0% | 98.4% |
| 4oj5A02 | 2.10.10.80 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.72 | 61.0 | 5.52e-01 | 100.0% | 93.0% |
| 2pliA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.66 | 49.0 | 4.10e-01 | 86.0% | 47.6% |
| 4maaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 55.0 | 3.84e-01 | 100.0% | 32.4% |
| 1f32A02 | 3.30.1120.50 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Pepsin inhibitor-3 | 0.63 | 34.0 | 3.23e-01 | 100.0% | 35.0% |
| 7ecrA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 48.0 | 3.41e-01 | 98.0% | 44.3% |
| 4m0hA01 | 2.60.120.1440 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 49.0 | 3.72e-01 | 100.0% | 46.0% |
| 2nqwA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.58 | 43.0 | 3.65e-01 | 86.0% | 47.1% |
| 4lqeA00 | 3.40.1350.140 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › MepB-like | 0.56 | 44.0 | 3.36e-01 | 98.0% | 75.8% |
| 3tqqA02 | 3.10.25.10 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain | 0.55 | 46.0 | 3.68e-01 | 96.0% | 77.4% |
| 3q0iA02 | 3.10.25.10 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain | 0.54 | 45.0 | 3.63e-01 | 96.0% | 78.1% |
| 4lgcA00 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.52 | 41.0 | 2.54e-01 | 100.0% | 44.0% |
| 1itvA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.52 | 42.0 | 2.85e-01 | 92.0% | 83.1% |
| 1xg9A02 | 3.10.25.20 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › | 0.51 | 43.0 | 4.10e-01 | 100.0% | 98.4% |
| 3vmaA03 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.51 | 40.0 | 3.41e-01 | 100.0% | 50.0% |
| 3hjhA02 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.51 | 39.0 | 3.41e-01 | 90.0% | 70.9% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1322863 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.94 | 75.0 | 7.78e-01 | 84.0% | 100.0% |
| 4307941 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.92 | 78.0 | 7.31e-01 | 90.0% | 100.0% |
| 1322862 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.91 | 74.0 | 7.56e-01 | 86.0% | 97.9% |
| 4009008 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.91 | 75.0 | 7.26e-01 | 88.0% | 98.2% |
| 4110715 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.90 | 75.0 | 7.00e-01 | 88.0% | 81.4% |
| 4444075 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.90 | 73.0 | 7.83e-01 | 86.0% | 100.0% |
| 3972100 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.90 | 79.0 | 7.10e-01 | 94.0% | 73.8% |
| 5026481 | 64.3.1.3 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12_2 | 0.89 | 77.0 | 7.77e-01 | 94.0% | 92.0% |
| 3971347 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.89 | 76.0 | 7.23e-01 | 92.0% | 86.2% |
| 1694867 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.88 | 73.0 | 7.22e-01 | 90.0% | 96.2% |
| 3976685 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.87 | 76.0 | 7.45e-01 | 94.0% | 100.0% |
| 4009007 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.87 | 73.0 | 7.33e-01 | 90.0% | 96.0% |
| 4233290 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.86 | 74.0 | 7.44e-01 | 94.0% | 100.0% |
| 4026053 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.85 | 62.0 | 6.89e-01 | 76.0% | 95.0% |
| 2389402 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.85 | 74.0 | 7.18e-01 | 94.0% | 87.0% |
| 1291025 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.82 | 74.0 | 6.50e-01 | 100.0% | 90.4% |
| 3412645 | 64.3.1.4 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › Tmp39 | 0.82 | 61.0 | 5.34e-01 | 78.0% | 58.6% |
| 4149799 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.81 | 64.0 | 6.44e-01 | 86.0% | 100.0% |
| 4009012 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.79 | 68.0 | 6.26e-01 | 96.0% | 84.4% |
| 4887092 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.77 | 69.0 | 5.77e-01 | 100.0% | 66.7% |
| 3981632 | 70.4.1.9 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_cement_2 | 0.74 | 52.0 | 5.73e-01 | 80.0% | 92.5% |
| 2736861 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.71 | 57.0 | 5.23e-01 | 92.0% | 76.1% |
| 3222227 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.69 | 47.0 | 2.86e-01 | 76.0% | 11.1% |
| 2736862 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.68 | 56.0 | 5.18e-01 | 98.0% | 85.3% |
| 5022946 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.64 | 49.0 | 4.29e-01 | 88.0% | 61.3% |
| 3942241 | 325.1.7.22 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › BSH_CusB | 0.63 | 45.0 | 4.07e-01 | 76.0% | 71.4% |
| 3999975 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.63 | 48.0 | 4.33e-01 | 88.0% | 65.3% |
| 3435159 | 304.4.1.55 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › GUB_WAK_bind | 0.61 | 46.0 | 3.27e-01 | 96.0% | 26.4% |
| 4187601 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.61 | 48.0 | 3.88e-01 | 92.0% | 75.2% |
| None | — | 0.60 | 42.0 | 2.38e-01 | 100.0% | 6.2% | |
| 5001934 | 2004.1.1.554 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter | 0.59 | 40.0 | 2.43e-01 | 100.0% | 9.0% |
| 4950782 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.58 | 47.0 | 3.69e-01 | 100.0% | 70.8% |
| 3955634 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.58 | 50.0 | 4.38e-01 | 100.0% | 77.5% |
| None | — | 0.57 | 40.0 | 2.35e-01 | 100.0% | 8.4% | |
| 4119514 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.55 | 47.0 | 3.09e-01 | 100.0% | 43.0% |
| 3940712 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.54 | 43.0 | 2.38e-01 | 90.0% | 12.2% |
| 4237852 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.54 | 47.0 | 3.02e-01 | 100.0% | 27.5% |
| 4382986 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.53 | 46.0 | 3.02e-01 | 100.0% | 42.3% |
| 4149520 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.52 | 46.0 | 2.95e-01 | 100.0% | 39.6% |
| 3164741 | 506.2.1.1 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UB2H | 0.51 | 42.0 | 3.67e-01 | 100.0% | 58.7% |
| 4024327 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 46.0 | 2.80e-01 | 100.0% | 79.0% |
| 4405609 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.51 | 40.0 | 3.44e-01 | 94.0% | 70.0% |
| 3839366 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.50 | 40.0 | 3.42e-01 | 94.0% | 70.0% |