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S2_005_003_R2_scaffold_22_prodigal-single.1__X__X__00095
Bact-VirS2_005_003_R2_scaffold_22_prodigal-single.1__X__X__00095
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-67
Domain cluster:
rep: MW879341.1__QXO10862.1__pEaSNUABM54_00036__00036__D11-77
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4id2A00 | 2.40.128.510 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 | 0.64 | 51.0 | 4.01e-01 | 100.0% | 39.7% |
| 2fkcA01 | 3.40.1350.40 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.64 | 55.0 | 4.55e-01 | 100.0% | 53.6% |
| 4da5A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 53.0 | 4.87e-01 | 100.0% | 75.9% |
| 3pgbA03 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 54.0 | 4.38e-01 | 100.0% | 71.6% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.61 | 47.0 | 3.10e-01 | 84.7% | 32.3% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 47.0 | 4.56e-01 | 93.2% | 77.3% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.59 | 42.0 | 4.43e-01 | 89.8% | 88.2% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.59 | 45.0 | 4.64e-01 | 100.0% | 91.1% |
| 7csoA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 49.0 | 3.90e-01 | 96.6% | 74.0% |
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 50.0 | 3.83e-01 | 100.0% | 81.1% |
| 3a35A02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.58 | 43.0 | 3.78e-01 | 83.1% | 72.8% |
| 6dnzA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.57 | 49.0 | 3.58e-01 | 100.0% | 97.2% |
| 3nqzA01 | 3.10.450.490 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 44.0 | 3.95e-01 | 96.6% | 57.1% |
| 2hdlA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 42.0 | 4.00e-01 | 86.4% | 64.9% |
| 2k2jA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 46.0 | 3.81e-01 | 96.6% | 76.1% |
| 8jx6A02 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 45.0 | 3.93e-01 | 98.3% | 56.3% |
| 4o8sA01 | 3.10.450.620 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain | 0.55 | 43.0 | 3.46e-01 | 100.0% | 41.6% |
| 2owpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 46.0 | 3.73e-01 | 100.0% | 79.1% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.55 | 45.0 | 3.43e-01 | 100.0% | 77.1% |
| 2e50B02 | 3.30.1120.90 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Nucleosome assembly protein | 0.55 | 45.0 | 3.83e-01 | 100.0% | 82.9% |
| 1wnhA01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 46.0 | 3.96e-01 | 100.0% | 64.0% |
| 2ia7A00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 3.76e-01 | 100.0% | 51.4% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 41.0 | 4.14e-01 | 100.0% | 83.9% |
| 1cjcA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 46.0 | 3.14e-01 | 100.0% | 83.8% |
| 7arcC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.54 | 41.0 | 3.31e-01 | 88.1% | 44.4% |
| 3f1zI00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 38.0 | 3.19e-01 | 81.4% | 39.7% |
| 7jrmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 45.0 | 4.22e-01 | 100.0% | 77.0% |
| 1golA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 41.0 | 3.25e-01 | 100.0% | 39.8% |
| 2oc3A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 39.0 | 2.60e-01 | 81.4% | 31.9% |
| 3b7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 43.0 | 3.57e-01 | 100.0% | 82.5% |
| 3fxzA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 36.0 | 3.22e-01 | 83.1% | 45.9% |
| 3rmhB00 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 37.0 | 2.97e-01 | 79.7% | 69.9% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 41.0 | 4.05e-01 | 96.6% | 88.9% |
| 6lbtA01 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 40.0 | 3.10e-01 | 88.1% | 50.0% |
| 3hduA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 45.0 | 3.37e-01 | 100.0% | 92.1% |
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.51 | 43.0 | 2.72e-01 | 100.0% | 21.6% |
| 3cebA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.51 | 34.0 | 3.02e-01 | 83.1% | 47.1% |
| 1sr9A02 | 3.30.160.270 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain | 0.51 | 44.0 | 3.26e-01 | 100.0% | 52.4% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 42.0 | 4.20e-01 | 96.6% | 90.5% |
| 2f86B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 41.0 | 3.38e-01 | 100.0% | 82.2% |
| 7qh7701 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.51 | 42.0 | 3.02e-01 | 98.3% | 78.5% |
| 5yxoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 3.48e-01 | 100.0% | 92.2% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3404320 | 395.1.1.1 ↗ | few secondary structure elements › Midkine-related › Midkine-related › Midkine-related › PTN_MK_C | 0.69 | 46.0 | 5.28e-01 | 71.2% | 95.3% |
| None | — | 0.63 | 47.0 | 3.09e-01 | 94.9% | 18.8% | |
| 5028736 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.62 | 46.0 | 3.15e-01 | 94.9% | 21.3% |
| 3221233 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 42.0 | 4.68e-01 | 98.3% | 93.3% |
| 4076295 | 375.1.1.88 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ogr_Delta | 0.62 | 43.0 | 4.46e-01 | 98.3% | 80.0% |
| 3440597 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.62 | 53.0 | 4.67e-01 | 100.0% | 77.8% |
| 3624657 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.61 | 48.0 | 3.94e-01 | 100.0% | 46.4% |
| 3993916 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.61 | 48.0 | 3.94e-01 | 100.0% | 46.4% |
| 3220943 | 207.1.1.127 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PHA-1 | 0.60 | 48.0 | 2.89e-01 | 88.1% | 20.2% |
| 3698204 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 51.0 | 3.27e-01 | 100.0% | 33.3% |
| 3948020 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.59 | 45.0 | 3.74e-01 | 100.0% | 45.5% |
| 4049492 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.59 | 52.0 | 3.12e-01 | 100.0% | 36.1% |
| 5030911 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 51.0 | 4.59e-01 | 100.0% | 78.3% |
| 4842604 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.58 | 44.0 | 3.88e-01 | 88.1% | 64.6% |
| 3472467 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.58 | 38.0 | 3.54e-01 | 71.2% | 53.3% |
| 4240105 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.57 | 47.0 | 3.88e-01 | 100.0% | 49.6% |
| 3728855 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 47.0 | 4.44e-01 | 98.3% | 89.3% |
| 3199180 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.56 | 48.0 | 3.33e-01 | 100.0% | 58.2% |
| 4486408 | 2.1.1.326 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF5482 | 0.56 | 39.0 | 2.98e-01 | 74.6% | 82.1% |
| 3221229 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 38.0 | 4.15e-01 | 72.9% | 95.6% |
| 3797649 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 40.0 | 3.28e-01 | 76.3% | 56.4% |
| 3232194 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.56 | 43.0 | 3.00e-01 | 86.4% | 27.4% |
| 4028885 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.56 | 45.0 | 4.44e-01 | 100.0% | 83.1% |
| 3669518 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.55 | 49.0 | 3.93e-01 | 100.0% | 52.2% |
| 3266046 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.55 | 39.0 | 3.97e-01 | 89.8% | 76.7% |
| 3998224 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.55 | 45.0 | 3.46e-01 | 94.9% | 37.9% |
| 3599172 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 45.0 | 4.42e-01 | 100.0% | 83.1% |
| 3580428 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 40.0 | 4.05e-01 | 79.7% | 86.7% |
| 4568161 | 283.2.1.18 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Lipoprotein_17 | 0.55 | 48.0 | 4.37e-01 | 100.0% | 82.5% |
| 4051625 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.55 | 45.0 | 4.38e-01 | 100.0% | 83.1% |
| 2774534 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.55 | 42.0 | 2.96e-01 | 88.1% | 27.3% |
| 3628486 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.55 | 40.0 | 2.93e-01 | 83.1% | 25.1% |
| 4393122 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.54 | 46.0 | 3.72e-01 | 100.0% | 67.2% |
| 5013017 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 45.0 | 3.48e-01 | 100.0% | 55.5% |
| 4957572 | 283.2.1.9 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Sheath_initiator | 0.54 | 45.0 | 3.48e-01 | 98.3% | 40.7% |
| 2388815 | 5.1.4.292 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, CAF1C_H4-bd, Beta-prop_EIPR1 | 0.54 | 45.0 | 4.05e-01 | 94.9% | 68.7% |
| 3251342 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.54 | 39.0 | 3.25e-01 | 81.4% | 44.2% |
| 4345080 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.54 | 40.0 | 3.98e-01 | 100.0% | 78.5% |
| 4391625 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.53 | 45.0 | 3.78e-01 | 100.0% | 71.8% |
| 4318553 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.53 | 46.0 | 3.00e-01 | 100.0% | 63.6% |
| 4201878 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.53 | 44.0 | 4.27e-01 | 96.6% | 84.6% |
| 4146937 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.53 | 43.0 | 4.28e-01 | 96.6% | 87.7% |
| 4104219 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.53 | 43.0 | 4.28e-01 | 96.6% | 89.2% |
| 4446791 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.53 | 43.0 | 4.26e-01 | 96.6% | 87.7% |
| 3421079 | 2003.1.2.102 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3, Pyr_redox_2 | 0.52 | 43.0 | 2.90e-01 | 100.0% | 45.7% |
| 5014254 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 41.0 | 4.12e-01 | 100.0% | 93.3% |
| 3456551 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.52 | 45.0 | 3.00e-01 | 100.0% | 23.5% |
| 3276506 | 244.1.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE | 0.52 | 44.0 | 2.65e-01 | 100.0% | 33.1% |
| 4101580 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.52 | 42.0 | 4.10e-01 | 96.6% | 86.2% |
| 1308711 | 4.1.1.108 ↗ | beta barrels › SH3 › SH3 › SH3 › XRN1_D2_D3 | 0.52 | 32.0 | 3.11e-01 | 83.1% | 52.2% |
| 2528641 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.52 | 34.0 | 3.61e-01 | 71.2% | 80.4% |
| 3496242 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 39.0 | 4.17e-01 | 98.3% | 100.0% |
| 4213539 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.51 | 41.0 | 4.03e-01 | 98.3% | 87.7% |
| 4419948 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.51 | 41.0 | 4.02e-01 | 98.3% | 87.7% |
| 3306779 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.51 | 41.0 | 4.01e-01 | 98.3% | 87.7% |
| 3608236 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.51 | 42.0 | 4.13e-01 | 96.6% | 87.7% |
| 4037383 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.51 | 41.0 | 4.02e-01 | 98.3% | 87.7% |
| 3829320 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.50 | 43.0 | 2.84e-01 | 100.0% | 37.0% |
| 3627588 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.50 | 43.0 | 2.96e-01 | 100.0% | 43.1% |
| 3697893 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.50 | 43.0 | 2.52e-01 | 100.0% | 20.4% |
D2
high
residues 70-145
Domain cluster:
rep: NC_028899.1__YP_009207974.1__AVU11_gp170__00176__D88-154
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25613.2 best | DUF7941 | 39.5 | 6.40e-10 | 100.0% | 28.1% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kjrA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 41.0 | 4.06e-01 | 77.6% | 91.3% |
| 3ov5A00 | 3.55.50.70 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.56 | 40.0 | 3.93e-01 | 76.3% | 94.0% |
| 3o4oC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 3.96e-01 | 90.8% | 86.9% |
| 5cyxA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.54 | 45.0 | 4.43e-01 | 93.4% | 97.6% |
| 6vg1A01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.53 | 45.0 | 4.25e-01 | 97.4% | 100.0% |
| 4ftdA01 | 2.60.40.2340 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 46.0 | 4.30e-01 | 100.0% | 96.8% |
| 2pkdA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 3.89e-01 | 93.4% | 96.3% |
| 2kk8A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 40.0 | 4.07e-01 | 86.8% | 90.4% |
| 4ikcA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.52 | 41.0 | 2.87e-01 | 100.0% | 24.5% |
| 2xotA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.74e-01 | 84.2% | 91.9% |
| 4d8oA03 | 2.60.40.2660 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 42.0 | 3.63e-01 | 96.1% | 92.1% |
| 3ewaA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 42.0 | 3.06e-01 | 100.0% | 89.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4197431 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 55.0 | 5.63e-01 | 93.4% | 100.0% |
| 4560456 | 4998.1.1.1 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 | 0.60 | 51.0 | 4.21e-01 | 96.1% | 84.3% |
| 3274237 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 37.0 | 2.54e-01 | 100.0% | 16.4% |
| 4978414 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 39.0 | 3.11e-01 | 100.0% | 34.3% |
| 3500274 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 47.0 | 4.22e-01 | 96.1% | 100.0% |
| 146927 | 3070.1.1.6 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › TcpQ | 0.54 | 40.0 | 3.48e-01 | 80.3% | 64.2% |
| 3407425 | 11.1.1.999 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28393 | 0.53 | 46.0 | 4.14e-01 | 100.0% | 90.9% |
| 2772349 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.53 | 46.0 | 4.20e-01 | 100.0% | 87.5% |
| 3571610 | 2002.1.1.68 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_56 | 0.51 | 41.0 | 2.63e-01 | 92.1% | 96.6% |