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S2_005_003_R2_scaffold_22_prodigal-single.1__X__X__00122
Bact-VirS2_005_003_R2_scaffold_22_prodigal-single.1__X__X__00122
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-127
Domain cluster:
rep: ALT_09252017_20_scaffold_43_prodigal-single.1__X__X__00209__D12-135
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vw4A01 | 1.10.340.50 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.68 | 42.0 | 4.44e-01 | 100.0% | 69.6% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 32.0 | 4.22e-01 | 76.0% | 100.0% |
| 4cxfA01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.61 | 37.0 | 3.99e-01 | 100.0% | 71.3% |
| 4b4yA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 39.0 | 3.54e-01 | 71.2% | 87.9% |
| 4n1kD00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.56 | 36.0 | 3.81e-01 | 91.3% | 71.3% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.56 | 29.0 | 3.76e-01 | 100.0% | 92.7% |
| 2n50A00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.55 | 36.0 | 3.98e-01 | 98.1% | 86.1% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.53 | 36.0 | 3.94e-01 | 100.0% | 86.6% |
| 1iv8A04 | 1.10.10.470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Maltooligosyl trehalose synthase; domain 4 | 0.53 | 39.0 | 4.01e-01 | 82.7% | 83.5% |
| 2oifB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 41.0 | 3.61e-01 | 82.7% | 63.6% |
| 1eyvB00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.51 | 42.0 | 3.95e-01 | 92.3% | 91.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4489939 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.70 | 40.0 | 5.06e-01 | 100.0% | 98.3% |
| 3286911 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 38.0 | 4.42e-01 | 100.0% | 87.1% |
| 3281755 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.62 | 35.0 | 4.35e-01 | 100.0% | 95.0% |
| 5018194 | 4307.1.1.41 ↗ | alpha duplicates or obligate multimers › EB1 dimerisation domain-like › EB1 dimerisation domain-like › EB1 dimerisation domain-like › DUF1016_N | 0.54 | 39.0 | 3.60e-01 | 85.6% | 57.1% |
| 4047162 | 604.15.1.0 ↗ | alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like | 0.53 | 25.0 | 3.28e-01 | 95.2% | 86.0% |
| 3494116 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.53 | 46.0 | 3.75e-01 | 98.1% | 82.9% |
| 4466219 | 5051.1.1.1 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SNF | 0.52 | 41.0 | 2.74e-01 | 84.6% | 66.5% |
| 4963293 | 101.1.2.921 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7109 | 0.52 | 40.0 | 4.23e-01 | 98.1% | 95.6% |
| 5064265 | 5051.1.1.1 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SNF | 0.52 | 45.0 | 3.07e-01 | 98.1% | 86.3% |