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S2_005_003_R2_scaffold_7_prodigal-single.1__X__X__00018
Bact-VirS2_005_003_R2_scaffold_7_prodigal-single.1__X__X__00018
Identity
- Kingdom:
- phage
Quality
70.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-61
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 61.0 | 4.57e-01 | 100.0% | 35.3% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 61.0 | 5.81e-01 | 100.0% | 74.2% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 56.0 | 5.66e-01 | 100.0% | 81.1% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 51.0 | 4.61e-01 | 100.0% | 53.3% |
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.73 | 55.0 | 4.93e-01 | 100.0% | 57.9% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 52.0 | 4.56e-01 | 92.5% | 52.6% |
| 1ixdA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.71 | 63.0 | 5.02e-01 | 100.0% | 59.6% |
| 1whmA01 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.69 | 61.0 | 5.52e-01 | 100.0% | 90.3% |
| 1txqA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.68 | 61.0 | 5.43e-01 | 100.0% | 81.1% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.67 | 60.0 | 4.31e-01 | 100.0% | 47.6% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.66 | 49.0 | 4.47e-01 | 100.0% | 58.7% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.64 | 50.0 | 4.06e-01 | 100.0% | 44.2% |
| 4dovA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.64 | 55.0 | 4.01e-01 | 100.0% | 48.4% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.64 | 51.0 | 4.93e-01 | 100.0% | 77.4% |
| 1m4zA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.63 | 55.0 | 3.75e-01 | 100.0% | 45.4% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.63 | 44.0 | 4.24e-01 | 96.2% | 63.5% |
| 1dgsA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 44.0 | 4.06e-01 | 84.9% | 56.2% |
| 5w3xD01 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.61 | 45.0 | 4.26e-01 | 94.3% | 64.6% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.60 | 44.0 | 3.64e-01 | 100.0% | 41.3% |
| 1e8uA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.59 | 50.0 | 3.00e-01 | 100.0% | 28.0% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.59 | 41.0 | 4.34e-01 | 71.7% | 89.1% |
| 4c47A01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.58 | 48.0 | 3.84e-01 | 100.0% | 82.8% |
| 3dohA01 | 2.60.40.2180 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 42.0 | 3.29e-01 | 83.0% | 50.4% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.57 | 35.0 | 3.86e-01 | 73.6% | 86.5% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 43.0 | 3.64e-01 | 86.8% | 48.9% |
| 2rsoA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 38.0 | 3.33e-01 | 84.9% | 43.5% |
| 3agjF01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.55 | 46.0 | 3.60e-01 | 100.0% | 51.2% |
| 5ixgA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.55 | 45.0 | 3.33e-01 | 100.0% | 42.3% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 43.0 | 3.25e-01 | 100.0% | 33.1% |
| 2jwyA01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.54 | 45.0 | 3.48e-01 | 100.0% | 65.2% |
| 3lf7A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 46.0 | 2.76e-01 | 100.0% | 19.9% |
| 2bi0A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 46.0 | 3.40e-01 | 100.0% | 88.2% |
| 4esqA00 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.53 | 44.0 | 3.11e-01 | 100.0% | 70.6% |
| 2da0A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 37.0 | 3.02e-01 | 100.0% | 35.1% |
| 4hntA04 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.53 | 39.0 | 3.29e-01 | 100.0% | 43.6% |
| 3tw6D02 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.52 | 41.0 | 3.70e-01 | 100.0% | 61.8% |
| 3bg3A01 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.51 | 37.0 | 3.17e-01 | 100.0% | 43.6% |
| 4apyA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.50 | 39.0 | 2.42e-01 | 94.3% | 62.8% |
| 2p25A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 40.0 | 3.20e-01 | 94.3% | 84.0% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3791777 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.77 | 70.0 | 5.94e-01 | 100.0% | 74.1% |
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.75 | 60.0 | 5.62e-01 | 100.0% | 70.8% |
| 3768116 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.74 | 59.0 | 3.93e-01 | 100.0% | 21.9% |
| 3219441 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.74 | 67.0 | 5.77e-01 | 100.0% | 77.5% |
| 3624306 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.74 | 66.0 | 4.94e-01 | 100.0% | 57.6% |
| 3888395 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.72 | 65.0 | 5.53e-01 | 100.0% | 76.2% |
| 3411042 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.71 | 59.0 | 5.70e-01 | 100.0% | 80.0% |
| 3676628 | 4.1.1.162 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF502 | 0.70 | 62.0 | 4.71e-01 | 100.0% | 43.3% |
| 5020511 | 3338.2.1.0 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB | 0.70 | 54.0 | 4.21e-01 | 100.0% | 39.1% |
| 3935042 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.70 | 62.0 | 4.85e-01 | 100.0% | 56.4% |
| 3998386 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.69 | 61.0 | 4.74e-01 | 100.0% | 54.8% |
| 3272197 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 62.0 | 4.89e-01 | 100.0% | 54.3% |
| 3304525 | 4.1.1.173 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4216 | 0.69 | 60.0 | 4.77e-01 | 100.0% | 75.5% |
| 3617741 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 60.0 | 4.02e-01 | 100.0% | 32.7% |
| 3406338 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.68 | 60.0 | 4.67e-01 | 100.0% | 54.8% |
| 4615629 | 4.1.1.449 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF1292 | 0.68 | 57.0 | 4.88e-01 | 100.0% | 58.8% |
| 3309829 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 59.0 | 4.16e-01 | 100.0% | 41.9% |
| 3470175 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.66 | 59.0 | 5.16e-01 | 100.0% | 75.0% |
| 4123449 | 4.8.1.35 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 | 0.66 | 57.0 | 4.87e-01 | 100.0% | 60.0% |
| 3523144 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.66 | 58.0 | 3.96e-01 | 100.0% | 37.4% |
| 3328224 | 4.1.1.336 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7699 | 0.65 | 57.0 | 4.33e-01 | 100.0% | 52.3% |
| 4234560 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.65 | 55.0 | 4.21e-01 | 100.0% | 58.5% |
| 3926950 | 4.1.1.214 ↗ | beta barrels › SH3 › SH3 › SH3 › GCN5L1 | 0.65 | 58.0 | 4.43e-01 | 100.0% | 55.0% |
| 3963504 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 55.0 | 4.24e-01 | 100.0% | 59.2% |
| 3991229 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.65 | 57.0 | 4.01e-01 | 100.0% | 41.2% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.64 | 56.0 | 4.33e-01 | 98.1% | 44.2% |
| 3981045 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.64 | 55.0 | 3.98e-01 | 100.0% | 33.3% |
| 3496040 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.63 | 56.0 | 3.99e-01 | 100.0% | 41.2% |
| 4976092 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 53.0 | 4.46e-01 | 100.0% | 55.6% |
| 3934274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 55.0 | 3.99e-01 | 100.0% | 49.7% |
| 3441121 | 708.1.1.2 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY | 0.62 | 47.0 | 4.29e-01 | 94.3% | 61.4% |
| 3205559 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.62 | 52.0 | 3.87e-01 | 100.0% | 35.9% |
| 3584109 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 52.0 | 3.87e-01 | 100.0% | 60.4% |
| 4517543 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.60 | 51.0 | 3.99e-01 | 100.0% | 53.6% |
| 3254881 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 48.0 | 4.49e-01 | 100.0% | 74.7% |
| 4013811 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.59 | 50.0 | 4.32e-01 | 100.0% | 64.4% |
| 3259841 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 51.0 | 4.69e-01 | 100.0% | 82.9% |
| 3931232 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 48.0 | 3.63e-01 | 90.6% | 39.2% |
| 3866981 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.58 | 43.0 | 3.77e-01 | 100.0% | 50.6% |
| 3974490 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 47.0 | 4.20e-01 | 100.0% | 63.7% |
| 4215369 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.57 | 49.0 | 3.79e-01 | 100.0% | 52.8% |
| 3631313 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.56 | 45.0 | 3.27e-01 | 100.0% | 31.1% |
| 3188394 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.56 | 48.0 | 3.80e-01 | 100.0% | 47.5% |
| 4028378 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.55 | 47.0 | 3.60e-01 | 100.0% | 52.3% |
| 2552660 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.55 | 46.0 | 3.59e-01 | 100.0% | 51.2% |
| 4941831 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.55 | 46.0 | 3.57e-01 | 100.0% | 52.3% |
| 4941652 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.54 | 46.0 | 3.60e-01 | 100.0% | 52.8% |
| 3639466 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.54 | 45.0 | 3.43e-01 | 100.0% | 46.9% |
| 4033291 | 9.5.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B › YceI | 0.53 | 43.0 | 3.20e-01 | 100.0% | 74.1% |
| 4389663 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.53 | 43.0 | 3.09e-01 | 100.0% | 30.0% |
| 3512537 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 43.0 | 3.46e-01 | 96.2% | 51.3% |
| 5035282 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.53 | 45.0 | 3.49e-01 | 100.0% | 54.4% |
| 3272235 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.52 | 42.0 | 3.11e-01 | 100.0% | 32.3% |
| 3397689 | 243.1.1.91 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4518 | 0.52 | 43.0 | 3.19e-01 | 100.0% | 65.0% |
| 3628989 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 37.0 | 2.76e-01 | 77.4% | 40.0% |
| 3009336 | 3794.1.2.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase | 0.52 | 40.0 | 3.68e-01 | 100.0% | 64.4% |
| 3229927 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.52 | 41.0 | 2.99e-01 | 100.0% | 29.7% |
| 4382339 | 304.112.1.1 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoL1 | 0.51 | 41.0 | 3.01e-01 | 100.0% | 30.6% |
| 3920725 | 304.112.1.1 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoL1 | 0.51 | 41.0 | 2.98e-01 | 100.0% | 29.7% |
| 1409347 | 3794.1.2.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase | 0.51 | 38.0 | 3.59e-01 | 100.0% | 64.7% |
| 3413282 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.51 | 40.0 | 3.08e-01 | 98.1% | 35.6% |
| 3803797 | 220.1.1.181 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_ULP | 0.50 | 41.0 | 3.28e-01 | 96.2% | 53.3% |