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S2_005_003_R2_scaffold_7_prodigal-single.1__X__X__00172
Bact-VirS2_005_003_R2_scaffold_7_prodigal-single.1__X__X__00172
Identity
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-75
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xp1A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.70 | 37.0 | 3.33e-01 | 94.3% | 36.8% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.66 | 45.0 | 3.58e-01 | 98.6% | 35.7% |
| 2rajA02 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.61 | 42.0 | 3.47e-01 | 100.0% | 39.7% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.60 | 42.0 | 3.70e-01 | 97.1% | 49.1% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.60 | 39.0 | 3.35e-01 | 100.0% | 41.4% |
| 4ntqB00 | 3.30.2450.20 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.59 | 41.0 | 3.32e-01 | 100.0% | 35.9% |
| 1xteA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 39.0 | 3.38e-01 | 100.0% | 43.1% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 36.0 | 3.95e-01 | 84.3% | 80.0% |
| 4qunA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 39.0 | 2.66e-01 | 75.7% | 79.9% |
| 2dixA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 37.0 | 3.61e-01 | 100.0% | 64.1% |
| 2basA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 31.0 | 2.71e-01 | 82.9% | 34.5% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.51 | 29.0 | 3.12e-01 | 74.3% | 64.3% |
| 3ijlA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 36.0 | 3.19e-01 | 75.7% | 99.1% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 30.0 | 3.15e-01 | 84.3% | 62.1% |
| 5dstA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.50 | 29.0 | 2.21e-01 | 74.3% | 21.5% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3614175 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.77 | 33.0 | 2.77e-01 | 75.7% | 26.4% |
| 3187166 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.65 | 37.0 | 3.44e-01 | 84.3% | 45.9% |
| 4314504 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.64 | 41.0 | 3.31e-01 | 100.0% | 34.1% |
| 3485727 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.63 | 44.0 | 4.01e-01 | 100.0% | 54.7% |
| 402817 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 41.0 | 3.59e-01 | 95.7% | 44.3% |
| 4024735 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.62 | 33.0 | 3.31e-01 | 78.6% | 50.0% |
| 3911618 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 46.0 | 3.50e-01 | 100.0% | 32.6% |
| 3388887 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.62 | 35.0 | 3.61e-01 | 84.3% | 58.5% |
| 3412668 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 43.0 | 3.64e-01 | 95.7% | 45.0% |
| 3648115 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 48.0 | 3.94e-01 | 100.0% | 46.7% |
| 3251342 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 44.0 | 3.69e-01 | 100.0% | 45.8% |
| 3738197 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.59 | 44.0 | 3.39e-01 | 100.0% | 33.9% |
| 3591102 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.59 | 45.0 | 3.53e-01 | 98.6% | 38.7% |
| 3893533 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.58 | 51.0 | 4.58e-01 | 98.6% | 72.0% |
| 3930986 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.58 | 46.0 | 4.05e-01 | 98.6% | 58.1% |
| 3410370 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 33.0 | 3.38e-01 | 78.6% | 57.1% |
| 4015016 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.56 | 31.0 | 3.07e-01 | 78.6% | 48.0% |
| 3281218 | 3812.1.1.0 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE | 0.56 | 38.0 | 3.17e-01 | 100.0% | 37.0% |
| 3245258 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.56 | 38.0 | 3.21e-01 | 85.7% | 40.0% |
| 3212945 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.56 | 34.0 | 3.61e-01 | 84.3% | 71.2% |
| 3621358 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.55 | 30.0 | 3.17e-01 | 78.6% | 53.8% |
| 3542147 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.55 | 38.0 | 3.07e-01 | 100.0% | 36.4% |
| 3314075 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.54 | 43.0 | 3.82e-01 | 88.6% | 78.1% |
| 3251857 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.54 | 39.0 | 3.12e-01 | 100.0% | 39.3% |
| 5055710 | 4985.1.1.0 ↗ | few secondary structure elements › DPY module › DPY module › DPY module | 0.54 | 29.0 | 3.49e-01 | 70.0% | 85.0% |
| 3902096 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 47.0 | 3.66e-01 | 100.0% | 82.6% |
| 3706903 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 46.0 | 3.63e-01 | 98.6% | 79.1% |
| 3882182 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.52 | 43.0 | 3.50e-01 | 91.4% | 81.5% |
| 3577911 | 220.1.1.15 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › BBL5 | 0.52 | 39.0 | 3.13e-01 | 100.0% | 40.0% |
| 3596066 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 37.0 | 3.11e-01 | 100.0% | 43.2% |
| 3842362 | 1.1.5.76 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT | 0.51 | 31.0 | 2.81e-01 | 78.6% | 44.2% |
| 3893274 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 44.0 | 3.45e-01 | 100.0% | 45.3% |
| 3614844 | 220.1.1.15 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › BBL5 | 0.51 | 38.0 | 3.10e-01 | 100.0% | 41.4% |
| 3175837 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 34.0 | 2.70e-01 | 92.9% | 32.7% |
| 3264469 | 4.1.1.309 ↗ | beta barrels › SH3 › SH3 › SH3 › MRP-S34 | 0.50 | 32.0 | 3.02e-01 | 78.6% | 50.6% |