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S2_005_003_R2_scaffold_7_prodigal-single.1__X__X__00429
Bact-VirS2_005_003_R2_scaffold_7_prodigal-single.1__X__X__00429
Identity
- Kingdom:
- phage
Quality
90.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 53-134
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2obaA00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.61 | 43.0 | 3.77e-01 | 73.2% | 91.7% |
| 2y3vD00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.57 | 50.0 | 4.13e-01 | 100.0% | 72.7% |
| 3ddcB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 47.0 | 4.03e-01 | 97.6% | 75.9% |
| 2fmlA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 45.0 | 3.71e-01 | 98.8% | 57.3% |
| 3q91B00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 45.0 | 3.87e-01 | 96.3% | 61.8% |
| 8evkA01 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.52 | 36.0 | 3.35e-01 | 73.2% | 92.6% |
| 2z8lA01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 45.0 | 4.04e-01 | 96.3% | 83.8% |
| 2kkcA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 43.0 | 4.12e-01 | 98.8% | 98.0% |
| 1ktgA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 43.0 | 3.74e-01 | 97.6% | 65.7% |
| 1ya5T01 | 2.20.160.10 | Mainly Beta › Single Sheet › titin filament fold › titin domain like | 0.51 | 31.0 | 3.12e-01 | 73.2% | 59.5% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4989491 | 3174.2.1.0 ↗ | beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA | 0.64 | 48.0 | 5.18e-01 | 98.8% | 95.7% |
| 4951452 | 212.1.1.18 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Lon_C | 0.60 | 46.0 | 4.16e-01 | 84.1% | 88.7% |
| 4995721 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.59 | 42.0 | 3.67e-01 | 74.4% | 93.6% |
| 5059050 | 221.10.1.0 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain | 0.59 | 42.0 | 4.61e-01 | 96.3% | 93.8% |
| 3964937 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.56 | 39.0 | 3.31e-01 | 73.2% | 94.3% |
| 4234065 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.56 | 40.0 | 3.42e-01 | 75.6% | 96.4% |
| 4966109 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.55 | 38.0 | 3.32e-01 | 73.2% | 96.2% |
| 3502329 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.55 | 46.0 | 4.50e-01 | 96.3% | 96.7% |
| 3939839 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 47.0 | 4.26e-01 | 97.6% | 79.1% |
| 3838488 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.54 | 43.0 | 3.37e-01 | 86.6% | 92.3% |
| 4624481 | 67.1.1.1 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C | 0.53 | 39.0 | 3.91e-01 | 84.1% | 76.5% |
| 3618613 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.53 | 41.0 | 3.29e-01 | 100.0% | 40.6% |
| 3579305 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 45.0 | 4.21e-01 | 97.6% | 94.2% |
| 6200 | 221.1.1.17 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Stap_Strp_tox_C | 0.52 | 45.0 | 4.14e-01 | 96.3% | 93.3% |
| 3237309 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 44.0 | 4.17e-01 | 98.8% | 94.2% |
| 3218103 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 44.0 | 4.11e-01 | 97.6% | 90.4% |
| 3397596 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 43.0 | 3.93e-01 | 100.0% | 96.7% |
| 3792886 | 11.1.5.84 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › ERMP1_C | 0.51 | 43.0 | 3.15e-01 | 97.6% | 98.0% |
| 3616159 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 41.0 | 3.44e-01 | 92.7% | 86.5% |
| 3916184 | 221.1.1.168 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd, PI3K_p85B | 0.51 | 44.0 | 3.02e-01 | 100.0% | 37.1% |
| 3629224 | 221.17.1.2 ↗ | a+b two layers › beta-Grasp › C-terminal wheel domain of Cns1 › C-terminal wheel domain of Cns1 › BCD1 | 0.50 | 42.0 | 3.42e-01 | 96.3% | 68.8% |
| 3175790 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 43.0 | 3.87e-01 | 100.0% | 89.2% |