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S2_005_003_R2_scaffold_7_prodigal-single.1__X__X__00455
Bact-VirS2_005_003_R2_scaffold_7_prodigal-single.1__X__X__00455
Identity
- Kingdom:
- phage
Quality
67.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-129
D2
medium
residues 130-233
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cwhA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.66 | 56.0 | 4.95e-01 | 95.2% | 75.6% |
| 3jckC00 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 57.0 | 3.96e-01 | 100.0% | 33.3% |
| 3k1rA01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.65 | 40.0 | 4.43e-01 | 70.2% | 79.0% |
| 2ilrA00 | 1.25.40.480 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 55.0 | 4.23e-01 | 98.1% | 73.5% |
| 1wy6A00 | 1.25.40.350 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 53.0 | 4.67e-01 | 97.1% | 84.9% |
| 1b89A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 53.0 | 3.84e-01 | 99.0% | 40.8% |
| 3cf6E05 | 1.10.840.10 | Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain | 0.61 | 49.0 | 3.73e-01 | 85.6% | 56.8% |
| 4me2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 52.0 | 4.37e-01 | 100.0% | 69.1% |
| 6t0bf00 | 1.25.40.40 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI | 0.60 | 50.0 | 5.05e-01 | 91.3% | 100.0% |
| 2ouxA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.60 | 51.0 | 4.86e-01 | 97.1% | 84.4% |
| 2vq2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 52.0 | 4.17e-01 | 100.0% | 48.6% |
| 7fhyB01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.59 | 52.0 | 3.82e-01 | 100.0% | 52.9% |
| 8gpvA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.58 | 51.0 | 4.75e-01 | 97.1% | 79.1% |
| 2qsrA01 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.57 | 42.0 | 3.73e-01 | 77.9% | 84.5% |
| 4ui9Y03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 41.0 | 4.56e-01 | 80.8% | 100.0% |
| 4gtnA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.55 | 38.0 | 4.25e-01 | 92.3% | 100.0% |
| 4lgvA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 44.0 | 3.67e-01 | 90.4% | 94.7% |
| 7powA01 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.53 | 40.0 | 3.30e-01 | 80.8% | 72.2% |
| 4evfA01 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.52 | 35.0 | 3.93e-01 | 73.1% | 100.0% |
| 4c91A03 | 1.20.58.2150 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 43.0 | 3.64e-01 | 96.2% | 62.0% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3254418 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.70 | 62.0 | 4.06e-01 | 100.0% | 30.2% |
| 3613340 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 62.0 | 4.04e-01 | 99.0% | 25.6% |
| 3663500 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.69 | 61.0 | 5.51e-01 | 99.0% | 100.0% |
| 3991668 | 109.3.1.177 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Clathrin | 0.68 | 58.0 | 4.78e-01 | 99.0% | 52.4% |
| 3829314 | 109.4.1.1280 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long | 0.68 | 60.0 | 5.33e-01 | 99.0% | 73.3% |
| 3356319 | 109.4.1.1741 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_At1g68980 | 0.67 | 60.0 | 4.62e-01 | 100.0% | 67.5% |
| 3614647 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 59.0 | 4.51e-01 | 100.0% | 55.3% |
| 3735220 | 109.4.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Clathrin | 0.67 | 57.0 | 4.64e-01 | 96.2% | 49.7% |
| 3371187 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 57.0 | 5.19e-01 | 96.2% | 83.4% |
| 3669124 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.66 | 59.0 | 4.32e-01 | 100.0% | 38.6% |
| 3805640 | 109.4.1.457 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Urb2 | 0.65 | 57.0 | 3.48e-01 | 100.0% | 33.5% |
| 3368917 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.64 | 50.0 | 4.55e-01 | 82.7% | 67.1% |
| 3645671 | 109.59.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Clathrin | 0.64 | 57.0 | 4.76e-01 | 100.0% | 67.0% |
| 3693511 | 109.4.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Clathrin | 0.64 | 56.0 | 4.17e-01 | 100.0% | 44.6% |
| 3346105 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.64 | 55.0 | 5.30e-01 | 100.0% | 85.0% |
| 4848263 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.64 | 55.0 | 4.54e-01 | 98.1% | 66.0% |
| 3613048 | 109.4.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Clathrin | 0.64 | 55.0 | 3.90e-01 | 96.2% | 47.1% |
| 3448231 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 56.0 | 4.88e-01 | 99.0% | 67.5% |
| 184628 | 109.4.1.154 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FA_FANCE | 0.63 | 55.0 | 4.23e-01 | 98.1% | 73.5% |
| 3729622 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 56.0 | 4.94e-01 | 100.0% | 88.4% |
| 3613046 | 109.4.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Clathrin | 0.63 | 56.0 | 4.10e-01 | 100.0% | 46.3% |
| 3592092 | 109.4.1.1160 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RESC10 | 0.62 | 56.0 | 4.19e-01 | 100.0% | 60.8% |
| 3784167 | 109.4.1.1329 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatB_MDM20, PF31234 | 0.62 | 54.0 | 3.27e-01 | 97.1% | 60.1% |
| 3520904 | 109.4.1.916 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_COPA_B | 0.61 | 49.0 | 3.82e-01 | 97.1% | 39.6% |
| 3939592 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.60 | 48.0 | 5.12e-01 | 87.5% | 100.0% |
| 5025722 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 47.0 | 4.56e-01 | 85.6% | 100.0% |
| 3966683 | 109.4.1.2056 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, TPR_16, TPR_19 | 0.60 | 52.0 | 3.85e-01 | 100.0% | 34.8% |
| 5019940 | 109.13.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N | 0.60 | 53.0 | 5.21e-01 | 100.0% | 92.2% |
| 3887781 | 109.27.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK | 0.58 | 50.0 | 4.87e-01 | 97.1% | 93.9% |
| 3476380 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 51.0 | 3.42e-01 | 100.0% | 62.9% |
| 3593452 | 109.59.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › TPR_IFT80_172 | 0.53 | 43.0 | 4.30e-01 | 100.0% | 85.5% |
| 3284117 | 106.1.1.11 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N | 0.51 | 37.0 | 3.45e-01 | 77.9% | 91.1% |