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S2_005_003_R2_scaffold_7_prodigal-single.1__X__X__00590
Bact-VirS2_005_003_R2_scaffold_7_prodigal-single.1__X__X__00590
Identity
- Kingdom:
- phage
Quality
92.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-76
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 38.0 | 4.57e-01 | 90.5% | 87.5% |
| 4yiiA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 40.0 | 4.08e-01 | 93.2% | 72.2% |
| 1vwxI01 | 3.90.1170.10 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Ribosomal protein L16/L10 | 0.57 | 46.0 | 3.48e-01 | 87.8% | 70.5% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4014657 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 50.0 | 5.83e-01 | 91.9% | 81.8% |
| 5013811 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 47.0 | 5.47e-01 | 83.8% | 76.4% |
| 3684956 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.74 | 44.0 | 4.69e-01 | 91.9% | 67.7% |
| 4016548 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.73 | 43.0 | 4.97e-01 | 91.9% | 78.2% |
| 1169399 | 101.35.1.2 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Lipoprotein_Ltp | 0.66 | 39.0 | 4.49e-01 | 91.9% | 82.7% |
| 3191996 | 101.1.2.480 ↗ | alpha arrays › HTH › HTH › winged helix domain › Clr5 | 0.65 | 38.0 | 4.28e-01 | 91.9% | 78.2% |
| 4311936 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.56 | 35.0 | 3.80e-01 | 83.8% | 76.7% |
| 3636681 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.56 | 36.0 | 2.37e-01 | 95.9% | 15.8% |
| 3988890 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.54 | 33.0 | 3.94e-01 | 89.2% | 100.0% |
| 3688182 | 101.40.1.1 ↗ | alpha arrays › HTH › 40S ribosomal protein S13 N-terminal domain › 40S ribosomal protein S13 N-terminal domain › Ribosomal_S13_N | 0.53 | 45.0 | 3.99e-01 | 93.2% | 70.5% |
| 4251057 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.52 | 45.0 | 3.72e-01 | 97.3% | 89.6% |
| 4454314 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.51 | 38.0 | 3.65e-01 | 97.3% | 69.4% |
| 3785576 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.51 | 41.0 | 3.46e-01 | 86.5% | 74.2% |
| 4305209 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.51 | 37.0 | 3.85e-01 | 97.3% | 84.3% |
| 4994212 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 40.0 | 2.93e-01 | 90.5% | 93.2% |
| 4570617 | 3121.1.1.2 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 | 0.50 | 37.0 | 3.77e-01 | 97.3% | 84.3% |