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S2_009_000_R2_scaffold_26_prodigal-single.1__X__X__00367
Bact-VirS2_009_000_R2_scaffold_26_prodigal-single.1__X__X__00367
Identity
- Kingdom:
- phage
Quality
59.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-101
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pqhA01 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.73 | 43.0 | 5.36e-01 | 92.9% | 98.3% |
| 4by2B00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.71 | 51.0 | 4.38e-01 | 100.0% | 47.7% |
| 3witA00 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.62 | 39.0 | 4.71e-01 | 100.0% | 98.4% |
| 2x3hA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.55 | 48.0 | 3.14e-01 | 100.0% | 42.2% |
| 4zovB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 44.0 | 3.07e-01 | 98.0% | 45.0% |
| 3afcA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 43.0 | 2.88e-01 | 100.0% | 54.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3210934 | 77.3.1.7 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF31062 | 0.75 | 50.0 | 4.96e-01 | 100.0% | 64.8% |
| 3700776 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.71 | 37.0 | 4.32e-01 | 70.7% | 71.4% |
| 3968348 | 77.2.1.5 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN_2 | 0.71 | 62.0 | 5.20e-01 | 100.0% | 57.5% |
| 3715045 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.60 | 33.0 | 3.84e-01 | 73.7% | 75.7% |
| 4928895 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.56 | 39.0 | 2.87e-01 | 93.9% | 26.5% |
| 4216435 | 3735.1.1.12 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell | 0.53 | 41.0 | 2.66e-01 | 100.0% | 17.3% |
| 4025365 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.51 | 36.0 | 3.46e-01 | 72.7% | 69.1% |