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S2_009_000_R2_scaffold_26_prodigal-single.1__X__X__00373
Bact-VirS2_009_000_R2_scaffold_26_prodigal-single.1__X__X__00373
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-22_44-136
Domain cluster:
rep: H1c1_full_scaffold_271_prodigal-single.1__X__X__00186__D15-35_47-118
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fwdA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 36.0 | 4.19e-01 | 74.8% | 91.0% |
| 2kxeA00 | 1.10.8.800 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › D-family DNA polymerase, DP1 subunit N-terminal domain | 0.56 | 33.0 | 4.00e-01 | 79.1% | 93.1% |
| 1v1gA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 38.0 | 3.22e-01 | 75.7% | 51.1% |
| 1dj8A00 | 1.10.890.10 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › HNS-dependent expression A | 0.51 | 33.0 | 3.80e-01 | 72.2% | 94.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3358186 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.66 | 50.0 | 3.58e-01 | 80.9% | 78.8% |
| 3255440 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.65 | 49.0 | 3.52e-01 | 80.9% | 78.0% |
| 3892039 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.65 | 49.0 | 3.41e-01 | 80.9% | 81.0% |
| 3717786 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.64 | 49.0 | 3.26e-01 | 80.9% | 83.4% |
| 3814705 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.64 | 48.0 | 3.47e-01 | 80.9% | 81.1% |
| 3610493 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 29.0 | 3.38e-01 | 75.7% | 71.2% |
| 3736870 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.54 | 33.0 | 3.89e-01 | 93.9% | 87.5% |
| 3793370 | 108.1.1.164 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › PF30347 | 0.54 | 37.0 | 3.15e-01 | 70.4% | 50.0% |
| 3579974 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 37.0 | 3.13e-01 | 70.4% | 48.7% |
| 4980491 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 36.0 | 2.81e-01 | 73.0% | 71.9% |
| 3272442 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 45.0 | 3.30e-01 | 99.1% | 89.2% |
D2
medium
residues 137-220
Domain cluster:
rep: cathepsin__YP_006607808__Apocheima_cinerarium_nucleopolyhedrovirus__307461__D59-159