←Back to structures
S2_009_000_R2_scaffold_26_prodigal-single.1__X__X__00441
Bact-VirS2_009_000_R2_scaffold_26_prodigal-single.1__X__X__00441
Identity
- Kingdom:
- phage
Quality
47.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 79-159_224-308
D2
medium
residues 160-223
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wwmA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.68 | 54.0 | 3.91e-01 | 87.5% | 59.4% |
| 2yb5F01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.62 | 47.0 | 4.31e-01 | 85.9% | 61.6% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.60 | 48.0 | 4.65e-01 | 90.6% | 80.0% |
| 3d2eA06 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 45.0 | 3.83e-01 | 92.2% | 51.3% |
| 2l4eA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.56 | 29.0 | 3.04e-01 | 78.1% | 52.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3856708 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.61 | 52.0 | 3.91e-01 | 100.0% | 55.4% |
| 4346963 | 7542.1.2.1 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › Aconitase | 0.53 | 43.0 | 3.34e-01 | 93.8% | 54.8% |
D3
medium
residues 309-423
D4
medium
residues 464-601
D5
medium
residues 602-617_812-918_938-951