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S2_009_000_R2_scaffold_26_prodigal-single.1__X__X__00441

Bact-Vir

S2_009_000_R2_scaffold_26_prodigal-single.1__X__X__00441

Identity

Kingdom:
phage

Quality

47.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 79-159_224-308
PDB
D2 medium residues 160-223
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wwmA00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.68 54.0 3.91e-01 87.5% 59.4%
2yb5F01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.62 47.0 4.31e-01 85.9% 61.6%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.60 48.0 4.65e-01 90.6% 80.0%
3d2eA06 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.57 45.0 3.83e-01 92.2% 51.3%
2l4eA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.56 29.0 3.04e-01 78.1% 52.6%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3856708 5057.1.1.0 ↗ alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore 0.61 52.0 3.91e-01 100.0% 55.4%
4346963 7542.1.2.1 ↗ a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › Aconitase 0.53 43.0 3.34e-01 93.8% 54.8%
D3 medium residues 309-423
PDB
D4 medium residues 464-601
PDB
D5 medium residues 602-617_812-918_938-951
PDB