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S2_009_000_R2_scaffold_40_prodigal-single.1__X__X__00190

Bact-Vir

S2_009_000_R2_scaffold_40_prodigal-single.1__X__X__00190

Identity

Kingdom:
phage

Quality

81.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 42-111
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.83 74.0 6.12e-01 98.6% 63.1%
3ojoB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 42.0 3.15e-01 82.9% 73.0%
2odaA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 37.0 2.64e-01 70.0% 42.7%
1sqpF00 1.10.1090.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain F › Cytochrome b-c1 complex subunit 7 0.53 40.0 3.58e-01 82.9% 67.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3474600 4207.1.2.48 ↗ alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › Med14 0.81 63.0 5.55e-01 82.9% 65.0%
3466298 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.80 63.0 5.68e-01 84.3% 66.3%
3915818 4207.1.1.35 ↗ alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Med14 0.78 63.0 5.58e-01 87.1% 68.0%
3405161 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.71 59.0 4.65e-01 88.6% 72.5%