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S2_009_000_R2_scaffold_40_prodigal-single.1__X__X__00221

Bact-Vir

S2_009_000_R2_scaffold_40_prodigal-single.1__X__X__00221

Identity

Kingdom:
phage

Quality

74.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-51
PDB
Domain cluster: representative
CATH (94)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hslX00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 73.0 4.47e-01 100.0% 19.2%
1jnrB02 6.20.260.10 Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain 0.79 58.0 4.69e-01 76.6% 47.0%
3t0qA00 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.79 67.0 4.09e-01 97.9% 36.5%
1mbyA00 2.40.50.930 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.79 57.0 4.82e-01 76.6% 82.7%
3rr1A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.78 55.0 3.91e-01 74.5% 25.5%
3t8qB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.78 55.0 4.09e-01 76.6% 30.4%
4mjgA00 3.30.2030.30 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.76 54.0 3.59e-01 80.9% 19.8%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.76 55.0 4.37e-01 76.6% 38.3%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.76 60.0 5.61e-01 95.7% 70.7%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.74 51.0 3.92e-01 72.3% 35.6%
1dgmA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.74 52.0 3.20e-01 74.5% 27.9%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.74 63.0 3.99e-01 100.0% 19.1%
3itwA02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.73 59.0 5.65e-01 93.6% 78.6%
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.73 63.0 4.45e-01 97.9% 68.0%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.73 65.0 5.23e-01 97.9% 86.2%
7zgmA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.73 64.0 3.99e-01 97.9% 70.9%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.73 57.0 3.47e-01 87.2% 17.2%
4mtsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.72 60.0 4.48e-01 97.9% 38.8%
4gioA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.72 58.0 4.60e-01 89.4% 88.5%
3frnA01 3.10.129.70 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.72 61.0 4.32e-01 93.6% 72.7%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.72 54.0 4.20e-01 83.0% 40.2%
3flpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 49.0 3.17e-01 72.3% 84.8%
3l8kA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.71 59.0 4.40e-01 95.7% 71.8%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 61.0 3.93e-01 100.0% 33.9%
4jpqA00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 56.0 3.60e-01 87.2% 58.9%
1stzA03 3.30.390.60 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Heat-inducible transcription repressor hrca homolog; domain 3 0.71 50.0 4.12e-01 76.6% 40.4%
8bddA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.70 58.0 3.50e-01 97.9% 53.1%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 60.0 4.76e-01 95.7% 81.1%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.70 61.0 3.74e-01 97.9% 70.1%
1bqnA05 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.70 50.0 3.67e-01 76.6% 28.2%
2i7rA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.70 57.0 4.41e-01 97.9% 39.5%
2rk0A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.70 57.0 4.35e-01 97.9% 37.2%
5wceA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.70 60.0 4.51e-01 100.0% 40.3%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.70 60.0 4.34e-01 100.0% 51.8%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.70 59.0 3.49e-01 100.0% 69.0%
1kllA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.70 56.0 4.27e-01 97.9% 38.3%
1w0pA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.70 57.0 3.37e-01 93.6% 15.4%
3d30A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.70 59.0 4.70e-01 95.7% 80.9%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 60.0 4.96e-01 97.9% 81.4%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.70 58.0 4.71e-01 93.6% 85.6%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 59.0 4.08e-01 100.0% 85.1%
4dsdA00 3.40.1420.30 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › 0.69 57.0 4.16e-01 91.5% 38.9%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.69 48.0 3.75e-01 74.5% 35.6%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.69 58.0 4.58e-01 97.9% 83.7%
3oxhA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.68 55.0 4.06e-01 95.7% 33.6%
1xdiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 59.0 3.83e-01 100.0% 83.9%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 58.0 4.15e-01 100.0% 75.7%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.68 51.0 4.53e-01 87.2% 56.7%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 49.0 4.90e-01 78.7% 75.5%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.67 57.0 4.09e-01 97.9% 31.7%
3bt3A02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.67 53.0 5.14e-01 95.7% 78.9%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 55.0 4.38e-01 93.6% 100.0%
3vcxA02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.67 51.0 5.05e-01 95.7% 81.1%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.66 56.0 4.93e-01 95.7% 73.2%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.66 56.0 4.21e-01 100.0% 38.1%
3ayjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 55.0 3.31e-01 100.0% 72.8%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 53.0 4.77e-01 91.5% 67.2%
1ykdB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.65 46.0 3.13e-01 76.6% 23.0%
1noyA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.65 45.0 3.32e-01 74.5% 51.5%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.65 53.0 4.67e-01 91.5% 63.4%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 52.0 3.72e-01 97.9% 33.8%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 52.0 3.81e-01 97.9% 35.6%
7tzoA01 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.64 53.0 3.59e-01 93.6% 98.9%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 55.0 3.29e-01 97.9% 19.8%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 47.0 3.63e-01 87.2% 33.6%
6zxfz01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.63 51.0 3.97e-01 100.0% 40.7%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 48.0 4.45e-01 83.0% 63.9%
1xfsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 55.0 3.84e-01 97.9% 33.8%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 53.0 3.77e-01 95.7% 35.0%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 54.0 3.98e-01 100.0% 37.2%
4mymA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.63 50.0 3.67e-01 97.9% 32.5%
5ighA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 52.0 4.32e-01 95.7% 55.7%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 51.0 3.65e-01 97.9% 31.5%
5ih0A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 48.0 4.05e-01 91.5% 50.5%
2xg5A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 51.0 4.20e-01 95.7% 87.0%
3f7wA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 51.0 4.22e-01 95.7% 53.8%
2wtzA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.62 50.0 3.29e-01 97.9% 78.2%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 47.0 4.18e-01 83.0% 57.6%
3dorA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.61 51.0 4.05e-01 100.0% 96.3%
2kilA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.61 52.0 3.46e-01 95.7% 61.3%
3otlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 50.0 3.61e-01 97.9% 34.6%
1lm4A00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.60 49.0 3.38e-01 97.9% 98.9%
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.60 51.0 4.39e-01 97.9% 79.2%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 49.0 4.52e-01 95.7% 72.3%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 47.0 4.18e-01 89.4% 59.7%
1szzA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.59 45.0 3.18e-01 85.1% 51.5%
3fcdB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 47.0 3.73e-01 100.0% 43.7%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 49.0 3.47e-01 97.9% 49.4%
5mteA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.59 47.0 3.53e-01 95.7% 60.6%
3jcuO01 2.40.160.30 Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor 0.58 46.0 3.28e-01 100.0% 70.5%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 43.0 3.68e-01 87.2% 51.9%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.55 42.0 3.43e-01 89.4% 41.6%
3h74A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.55 40.0 2.54e-01 83.0% 39.6%
2k49A00 2.30.29.80 Mainly Beta › Roll › PH-domain like › 0.54 45.0 3.45e-01 95.7% 56.8%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4049598 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.90 66.0 4.98e-01 76.6% 36.0%
4038272 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.90 66.0 5.06e-01 76.6% 37.9%
4210722 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.88 64.0 4.87e-01 76.6% 36.0%
4265681 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.88 64.0 4.86e-01 76.6% 36.0%
4073485 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.88 65.0 4.88e-01 78.7% 35.2%
4183744 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.88 65.0 4.96e-01 78.7% 37.0%
3954816 101.1.2.584 ↗ alpha arrays › HTH › HTH › winged helix domain › HrcA 0.87 63.0 4.88e-01 76.6% 38.9%
4297175 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.87 63.0 4.96e-01 76.6% 40.0%
4379144 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.87 63.0 4.88e-01 76.6% 37.9%
4426619 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.87 63.0 4.87e-01 76.6% 38.9%
4435801 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.87 62.0 4.86e-01 76.6% 38.9%
4165690 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.86 62.0 4.69e-01 76.6% 35.2%
4609775 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.86 62.0 4.83e-01 76.6% 37.9%
4566718 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.86 62.0 4.94e-01 76.6% 40.0%
4089654 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.86 62.0 4.68e-01 76.6% 34.3%
4065841 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.86 62.0 4.85e-01 76.6% 38.9%
4303869 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.86 62.0 4.91e-01 76.6% 40.0%
4062936 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.86 62.0 4.67e-01 76.6% 35.2%
4440818 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.86 62.0 4.74e-01 76.6% 36.0%
4373440 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.86 62.0 4.82e-01 76.6% 37.9%
4031599 101.1.2.584 ↗ alpha arrays › HTH › HTH › winged helix domain › HrcA 0.85 62.0 4.81e-01 76.6% 37.9%
4223376 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.85 62.0 4.66e-01 76.6% 34.3%
4405947 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.85 62.0 4.73e-01 76.6% 36.0%
4468322 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.85 61.0 4.72e-01 76.6% 39.0%
4413603 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.85 63.0 4.82e-01 78.7% 37.0%
4072334 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.85 61.0 4.71e-01 76.6% 36.0%
4278807 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.85 63.0 4.67e-01 78.7% 34.5%
4036940 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.84 61.0 4.75e-01 76.6% 38.9%
4069377 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.84 61.0 4.75e-01 76.6% 38.9%
4182291 223.1.1.5 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA 0.84 62.0 3.82e-01 78.7% 14.5%
4489443 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.84 61.0 4.53e-01 76.6% 35.5%
4320111 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.84 63.0 4.79e-01 78.7% 37.0%
4083184 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.84 62.0 4.75e-01 78.7% 37.0%
4548716 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.84 61.0 4.65e-01 76.6% 36.0%
4383423 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.84 60.0 4.71e-01 76.6% 37.9%
4355046 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.84 60.0 4.71e-01 76.6% 37.9%
4320712 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.84 62.0 4.82e-01 78.7% 38.9%
4354219 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.83 60.0 4.62e-01 76.6% 36.0%
4059525 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.83 60.0 4.69e-01 76.6% 37.9%
4232558 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.83 61.0 4.72e-01 78.7% 38.0%
4067945 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.83 61.0 4.61e-01 78.7% 35.2%
4385005 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.83 61.0 4.76e-01 78.7% 38.9%
4087673 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.82 59.0 4.57e-01 76.6% 36.0%
4201328 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.82 59.0 4.64e-01 76.6% 37.9%
4353121 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.82 59.0 4.55e-01 76.6% 37.0%
4431607 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.82 59.0 4.58e-01 76.6% 36.0%
4437421 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.81 59.0 4.53e-01 76.6% 36.0%
4066174 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.81 58.0 4.45e-01 76.6% 34.3%
4314572 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.81 59.0 4.60e-01 78.7% 37.0%
4431372 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.81 58.0 4.56e-01 76.6% 38.9%
4055381 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.80 57.0 4.54e-01 76.6% 37.9%
4622237 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.80 59.0 4.65e-01 78.7% 38.9%
4325808 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.80 57.0 4.53e-01 76.6% 37.9%
4065004 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.79 57.0 4.28e-01 76.6% 34.5%
4193896 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.79 56.0 4.48e-01 76.6% 37.9%
4350854 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.79 56.0 4.32e-01 76.6% 36.2%
4058734 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.77 55.0 4.36e-01 76.6% 40.0%
4927362 802.1.1.0 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.76 53.0 5.42e-01 74.5% 82.2%
3237220 220.1.1.84 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_15 0.75 65.0 4.81e-01 95.7% 80.9%
4129953 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.75 61.0 5.44e-01 100.0% 64.6%
5053926 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.75 63.0 5.30e-01 95.7% 57.5%
4964236 2008.4.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like 0.74 63.0 4.97e-01 97.9% 46.0%
3382749 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.73 63.0 4.44e-01 100.0% 36.0%
3209968 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.73 64.0 3.72e-01 100.0% 13.8%
4270923 206.1.1.11 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.73 64.0 3.93e-01 100.0% 88.2%
3639196 3256.1.1.0 ↗ a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.72 60.0 5.92e-01 91.5% 100.0%
3477683 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.72 63.0 3.78e-01 97.9% 20.3%
2712015 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.72 61.0 5.16e-01 97.9% 86.4%
3908519 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.72 62.0 4.55e-01 97.9% 64.8%
4857803 2.1.1.40 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNAP_B_exo_N 0.72 51.0 5.55e-01 76.6% 100.0%
3675483 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 63.0 3.67e-01 100.0% 12.0%
3289887 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.71 58.0 5.37e-01 97.9% 75.4%
4632722 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.71 61.0 3.86e-01 100.0% 66.7%
3717566 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.71 55.0 3.45e-01 97.9% 15.6%
3640527 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.71 63.0 4.04e-01 100.0% 25.6%
3837575 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.71 60.0 3.55e-01 97.9% 87.7%
3989851 11.1.1.1339 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CFSR 0.70 61.0 4.32e-01 100.0% 48.3%
3589473 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 58.0 4.89e-01 95.7% 73.8%
4349950 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.69 53.0 4.98e-01 97.9% 68.3%
3563547 220.1.1.27 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.68 58.0 4.26e-01 95.7% 76.0%
3508714 295.1.1.29 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › YjeJ 0.68 61.0 4.19e-01 100.0% 81.2%
3673266 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 48.0 4.02e-01 76.6% 44.7%
4119875 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.68 53.0 4.79e-01 97.9% 63.1%
3993013 5.1.4.90 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Itfg2 0.67 58.0 3.51e-01 97.9% 20.9%
3994731 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.67 54.0 3.71e-01 93.6% 51.7%
4159666 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.67 52.0 4.03e-01 97.9% 37.6%
3921266 5.1.4.37 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.66 57.0 3.27e-01 100.0% 9.6%
4280539 109.21.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 0.66 55.0 3.01e-01 93.6% 9.0%
3472026 220.1.1.27 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.66 54.0 4.16e-01 97.9% 70.0%
4068978 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.66 51.0 4.44e-01 97.9% 54.7%
4107506 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.66 51.0 4.65e-01 97.9% 63.1%
4398495 109.21.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 0.65 54.0 2.98e-01 93.6% 9.6%
4127839 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.65 49.0 4.28e-01 97.9% 53.3%
3360687 267.1.1.0 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.65 53.0 3.74e-01 95.7% 40.6%
3699518 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.65 55.0 4.09e-01 97.9% 60.0%
3591463 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.64 55.0 4.21e-01 97.9% 65.2%
3165403 4958.1.1.0 ↗ a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit 0.64 50.0 4.57e-01 100.0% 63.1%
4183857 325.1.7.30 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Peptidase_M23 0.63 48.0 4.19e-01 97.9% 54.7%
3570692 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.63 54.0 4.09e-01 97.9% 68.7%
3253063 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.63 55.0 4.14e-01 97.9% 67.8%
D2 high residues 53-100
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.99 69.0 6.51e-01 72.9% 62.5%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.96 71.0 5.93e-01 77.1% 49.3%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.96 71.0 4.45e-01 77.1% 18.0%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.96 71.0 6.02e-01 77.1% 51.4%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.95 70.0 5.73e-01 77.1% 46.3%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.95 70.0 6.22e-01 77.1% 59.4%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 70.0 6.16e-01 77.1% 58.5%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 69.0 6.29e-01 77.1% 68.9%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 69.0 5.66e-01 77.1% 47.5%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 69.0 6.27e-01 77.1% 62.3%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 67.0 5.35e-01 75.0% 41.4%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 69.0 5.92e-01 77.1% 52.9%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 72.0 6.87e-01 81.2% 74.1%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.91 69.0 6.54e-01 81.2% 69.6%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 64.0 6.43e-01 75.0% 73.5%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.90 69.0 6.59e-01 81.2% 72.2%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 69.0 6.18e-01 81.2% 61.9%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.88 71.0 5.32e-01 87.5% 38.5%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.88 78.0 5.67e-01 100.0% 38.1%
1lvaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 65.0 5.99e-01 83.3% 71.0%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.85 64.0 4.48e-01 81.2% 28.4%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 61.0 5.04e-01 79.2% 45.9%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 64.0 5.87e-01 81.2% 65.0%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 61.0 6.03e-01 79.2% 74.5%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 63.0 6.06e-01 87.5% 73.2%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 65.0 6.66e-01 97.9% 93.3%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.79 63.0 4.85e-01 85.4% 43.6%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.79 66.0 4.08e-01 91.7% 22.3%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.79 59.0 4.71e-01 81.2% 41.5%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 63.0 5.59e-01 95.8% 64.3%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.76 68.0 4.69e-01 100.0% 96.8%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 61.0 5.90e-01 89.6% 78.2%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 52.0 4.69e-01 75.0% 55.6%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 51.0 4.58e-01 75.0% 53.0%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 55.0 5.59e-01 81.2% 100.0%
2o7tA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.73 60.0 4.01e-01 91.7% 31.4%
2oi8A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.73 65.0 4.21e-01 100.0% 36.0%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 59.0 5.08e-01 91.7% 56.6%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.04e-01 91.7% 58.3%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 55.0 5.32e-01 85.4% 74.1%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 59.0 4.77e-01 100.0% 51.0%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 52.0 4.31e-01 79.2% 62.8%
3b81A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.70 57.0 3.83e-01 91.7% 29.5%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 5.45e-01 93.8% 89.5%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 55.0 5.13e-01 97.9% 69.2%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 52.0 4.53e-01 83.3% 63.9%
3k69A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 51.0 3.65e-01 85.4% 28.7%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 4.40e-01 85.4% 51.9%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 50.0 4.65e-01 87.5% 63.1%
5k7fA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 46.0 4.92e-01 75.0% 100.0%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 51.0 4.40e-01 87.5% 53.7%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 51.0 4.63e-01 87.5% 64.1%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 54.0 3.94e-01 100.0% 44.0%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 41.0 3.64e-01 85.4% 53.9%
3ehkA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 44.0 2.86e-01 95.8% 47.1%
5wxuD01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 41.0 2.75e-01 100.0% 50.4%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4986612 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.99 67.0 6.99e-01 70.8% 75.6%
3968864 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 73.0 6.04e-01 77.1% 49.3%
4578719 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 73.0 6.47e-01 77.1% 58.7%
4492035 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 72.0 6.17e-01 77.1% 52.9%
5022417 101.1.3.8 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.97 72.0 5.72e-01 77.1% 43.5%
4139052 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.97 72.0 5.99e-01 77.1% 49.3%
2753461 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.97 72.0 5.95e-01 77.1% 48.7%
3962903 101.1.2.486 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_58 0.97 73.0 8.00e-01 79.2% 95.0%
4148139 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.97 72.0 4.77e-01 77.1% 27.1%
3602714 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.96 67.0 7.39e-01 77.1% 87.5%
5020571 101.1.1.101 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.96 85.0 6.34e-01 93.8% 42.9%
3975610 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.96 71.0 6.08e-01 77.1% 52.9%
4661582 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.96 71.0 5.17e-01 77.1% 33.6%
3590541 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.96 71.0 4.55e-01 77.1% 20.6%
3287232 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.96 89.0 7.49e-01 100.0% 64.0%
3278040 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.95 77.0 7.04e-01 85.4% 68.3%
1546121 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 70.0 5.87e-01 77.1% 49.3%
3944309 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.95 72.0 7.14e-01 81.2% 76.0%
3922450 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.95 70.0 7.58e-01 77.1% 92.5%
4054648 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.95 87.0 8.32e-01 100.0% 87.3%
4304581 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.95 70.0 5.37e-01 77.1% 40.4%
4541333 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.94 67.0 6.67e-01 75.0% 74.0%
4470400 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.94 69.0 5.96e-01 77.1% 52.9%
3588657 101.1.1.101 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.94 67.0 6.63e-01 75.0% 72.0%
3941764 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.94 69.0 6.11e-01 77.1% 56.9%
3988145 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.94 68.0 6.77e-01 77.1% 74.0%
5011648 101.1.1.368 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.93 72.0 7.13e-01 85.4% 78.0%
3944370 101.1.1.318 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF30335 0.93 70.0 6.04e-01 79.2% 54.3%
5043241 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.93 70.0 7.64e-01 85.4% 95.0%
4031535 101.1.1.275 ↗ alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.93 68.0 6.23e-01 77.1% 61.7%
4510105 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.93 64.0 6.99e-01 72.9% 87.5%
3944883 3317.1.1.2 ↗ alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB 0.92 66.0 5.03e-01 75.0% 36.0%
3980765 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.92 67.0 4.47e-01 77.1% 25.5%
4992594 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.92 67.0 6.93e-01 77.1% 82.2%
4004247 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.92 67.0 5.54e-01 77.1% 46.3%
4253265 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.92 67.0 4.44e-01 77.1% 25.5%
3283589 101.1.1.368 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.91 72.0 7.17e-01 85.4% 82.0%
4927516 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.90 67.0 6.20e-01 83.3% 63.3%
5063318 101.1.6.12 ↗ alpha arrays › HTH › HTH › TrpR › HTH_23 0.89 76.0 7.29e-01 93.8% 81.8%
5038965 101.1.1.35 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.89 63.0 6.56e-01 79.2% 80.0%
3544647 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.89 68.0 6.06e-01 85.4% 60.0%
4385054 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.89 69.0 7.37e-01 85.4% 100.0%
5077769 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 73.0 7.26e-01 89.6% 86.0%
3977374 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 71.0 6.72e-01 87.5% 74.5%
3204806 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.88 67.0 6.92e-01 85.4% 86.7%
4008046 101.1.1.348 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF30461 0.88 64.0 6.34e-01 79.2% 74.0%
4944887 101.1.1.546 ↗ alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.88 79.0 5.81e-01 100.0% 40.8%
4334657 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.88 66.0 6.78e-01 79.2% 84.4%
4862437 101.1.1.198 ↗ alpha arrays › HTH › HTH › Three-helical HTH › KorB 0.87 69.0 6.10e-01 87.5% 60.3%
4952807 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.85 75.0 6.44e-01 97.9% 64.0%
3477795 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.84 58.0 5.96e-01 72.9% 77.8%
3955106 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.84 64.0 5.18e-01 83.3% 45.6%
4974140 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 71.0 5.66e-01 100.0% 48.0%
5030780 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.82 63.0 6.25e-01 85.4% 84.0%
3931341 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 68.0 5.54e-01 93.8% 53.3%
4952294 101.1.2.870 ↗ alpha arrays › HTH › HTH › winged helix domain › GerE 0.82 72.0 6.81e-01 100.0% 81.8%
4970998 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.81 67.0 5.30e-01 97.9% 45.0%
4964802 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 65.0 6.11e-01 91.7% 73.3%
4086835 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.81 62.0 5.20e-01 83.3% 58.7%
3968886 101.1.1.77 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_50 0.80 64.0 5.85e-01 91.7% 67.7%
4339699 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.79 61.0 5.83e-01 83.3% 85.5%
4162857 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.79 63.0 6.28e-01 91.7% 84.0%
5078641 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.79 60.0 5.18e-01 85.4% 57.0%
3586944 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.78 60.0 4.85e-01 83.3% 44.4%
4550123 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.78 61.0 5.66e-01 85.4% 78.3%
4486944 7565.1.1.0 ↗ a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.77 72.0 4.70e-01 100.0% 28.3%
3590198 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.76 56.0 4.51e-01 81.2% 42.2%
1159643 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.76 61.0 5.40e-01 89.6% 60.6%
3948820 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.76 59.0 4.78e-01 85.4% 52.2%
3927372 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.75 59.0 5.00e-01 87.5% 77.5%
4090141 101.1.1.494 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_29 0.73 53.0 4.91e-01 79.2% 61.7%
3299379 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.73 65.0 4.53e-01 100.0% 38.7%
4980944 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 55.0 4.66e-01 89.6% 52.5%
3933366 101.1.6.12 ↗ alpha arrays › HTH › HTH › TrpR › HTH_23 0.68 62.0 5.39e-01 100.0% 85.7%