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S2_009_000_R2_scaffold_40_prodigal-single.1__X__X__00236

Bact-Vir

S2_009_000_R2_scaffold_40_prodigal-single.1__X__X__00236

Identity

Kingdom:
phage

Quality

73.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-60
PDB
Domain cluster: representative
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1in0A01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.82 73.0 6.85e-01 100.0% 81.4%
1earA02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.80 62.0 5.87e-01 100.0% 71.0%
1gmuA01 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.80 61.0 5.92e-01 100.0% 73.1%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.77 71.0 6.78e-01 100.0% 86.8%
3ezjA03 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.77 63.0 6.46e-01 100.0% 96.4%
1zvpD00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.76 67.0 5.19e-01 100.0% 45.8%
3aawA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.76 67.0 4.86e-01 100.0% 37.6%
1lxnA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.76 67.0 5.68e-01 100.0% 63.3%
1uu1B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.76 61.0 4.74e-01 100.0% 40.5%
1tuaA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.74 64.0 5.37e-01 100.0% 66.7%
1s7hA02 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 64.0 5.82e-01 100.0% 72.0%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 64.0 5.38e-01 100.0% 60.2%
3aqoA01 3.30.70.3400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 65.0 5.90e-01 100.0% 88.7%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 65.0 5.68e-01 100.0% 67.4%
3ldgA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.72 63.0 4.36e-01 98.3% 83.5%
4makB00 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 55.0 5.08e-01 100.0% 64.5%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 62.0 5.40e-01 100.0% 65.6%
1zhvA00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.72 64.0 4.88e-01 100.0% 47.0%
1s7hA01 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 62.0 5.67e-01 100.0% 73.8%
4mz0B05 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.71 58.0 5.58e-01 100.0% 79.1%
4lowA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.71 60.0 5.49e-01 100.0% 78.6%
2ctfA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.71 62.0 5.21e-01 100.0% 61.8%
4qmfD02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.71 61.0 5.36e-01 100.0% 75.0%
4g08A02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.71 63.0 5.97e-01 100.0% 84.3%
3dgpA00 3.30.70.2610 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 56.0 5.61e-01 100.0% 87.1%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.71 58.0 4.86e-01 91.5% 54.4%
4kr6A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.71 62.0 4.46e-01 100.0% 95.9%
4mo0A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.70 56.0 5.17e-01 100.0% 68.4%
1yqhA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 59.0 5.04e-01 100.0% 57.7%
3oq2A00 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 59.0 5.01e-01 100.0% 58.6%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 52.0 4.01e-01 83.1% 71.6%
3mahA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 57.0 5.54e-01 100.0% 88.4%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 52.0 3.94e-01 83.1% 71.4%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.67 54.0 4.44e-01 91.5% 47.7%
2ja9A02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.67 55.0 5.06e-01 98.3% 73.8%
2i8eA01 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 53.0 4.98e-01 100.0% 73.0%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 50.0 3.81e-01 83.1% 70.0%
2j0wA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 56.0 5.27e-01 100.0% 92.0%
1kafA00 3.90.1150.20 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain 0.66 53.0 4.40e-01 100.0% 50.0%
1nrkA02 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.65 55.0 4.96e-01 100.0% 85.1%
4qjvA03 3.30.70.3110 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 48.0 4.81e-01 100.0% 77.4%
2e29A01 3.30.70.2280 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 55.0 5.14e-01 100.0% 85.5%
1zpwX00 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 50.0 4.62e-01 100.0% 64.6%
4erdA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.63 52.0 4.43e-01 100.0% 60.2%
4byfA01 1.20.5.4820 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.62 52.0 4.59e-01 94.9% 77.8%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.61 45.0 4.09e-01 81.4% 87.8%
3p04A00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.60 43.0 4.02e-01 78.0% 92.2%
2ckwA03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.60 49.0 4.12e-01 100.0% 72.4%
2gqcA01 3.30.70.2080 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 48.0 4.95e-01 100.0% 100.0%
2gqfA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 51.0 3.43e-01 100.0% 77.5%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 3.34e-01 81.4% 73.3%
2o0bA01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.59 52.0 3.55e-01 100.0% 30.6%
1wzcA02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.59 45.0 4.10e-01 86.4% 81.9%
7m0oA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.59 51.0 3.65e-01 100.0% 34.8%
3zihA00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.58 44.0 4.04e-01 83.1% 89.9%
2e9hA01 3.30.30.170 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.58 48.0 4.00e-01 100.0% 51.3%
1fxrA00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 47.0 4.67e-01 100.0% 87.5%
7ykvB02 3.10.310.30 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.57 47.0 4.12e-01 100.0% 59.4%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.57 47.0 4.16e-01 98.3% 67.0%
5ghrA02 3.10.310.30 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.56 46.0 3.78e-01 100.0% 48.0%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.56 49.0 4.20e-01 100.0% 68.4%
3a2vD02 3.30.1020.10 Alpha Beta › 2-Layer Sandwich › Antioxidant, Horf6; Chain A, domain 2 › Antioxidant, Horf6; Chain A, domain2 0.56 40.0 3.58e-01 81.4% 77.9%
5optn00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.71e-01 91.5% 77.4%
4bpe700 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.66e-01 93.2% 66.3%
3jamK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.62e-01 91.5% 69.8%
3thxB01 3.40.1170.10 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I 0.52 38.0 3.10e-01 100.0% 37.4%
2mahA00 1.10.2000.10 Mainly Alpha › Orthogonal Bundle › Frizzled cysteine-rich domain › Frizzled cysteine-rich domain 0.52 40.0 3.31e-01 91.5% 61.7%
4y4mC00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 45.0 2.98e-01 100.0% 66.3%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.42e-01 84.7% 61.2%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.71e-01 91.5% 64.7%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.63e-01 89.8% 71.4%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.51 43.0 3.32e-01 96.6% 65.2%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.61e-01 93.2% 68.9%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 3.71e-01 96.6% 69.9%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 38.0 3.48e-01 88.1% 75.9%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3561147 327.16.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.86 75.0 7.76e-01 100.0% 100.0%
4977215 304.117.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC 0.81 63.0 6.34e-01 98.3% 85.0%
5293 304.22.1.1 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.80 62.0 5.90e-01 100.0% 72.1%
4153537 304.22.1.1 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.80 61.0 5.55e-01 100.0% 61.3%
3639719 304.8.1.10 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.80 72.0 6.50e-01 100.0% 75.0%
3740981 328.7.1.1 a+b two layers › IF3-like › Smr domain › Smr domain › Smr 0.80 56.0 4.87e-01 72.9% 52.9%
4472004 304.22.1.1 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.80 61.0 5.63e-01 100.0% 65.3%
4034485 304.120.1.5 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmL_1st 0.79 62.0 5.91e-01 100.0% 72.9%
1114523 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.78 63.0 5.60e-01 100.0% 61.6%
5049019 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.78 69.0 5.73e-01 100.0% 59.2%
4407103 327.16.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.78 66.0 6.58e-01 98.3% 91.7%
5082143 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.78 69.0 5.68e-01 100.0% 59.0%
5040129 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.77 67.0 5.77e-01 100.0% 63.2%
5027879 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.77 66.0 6.14e-01 96.6% 92.0%
5060568 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.77 61.0 6.13e-01 100.0% 86.7%
4019157 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.77 67.0 5.54e-01 100.0% 56.5%
4119221 327.16.1.3 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N 0.76 70.0 6.76e-01 100.0% 90.8%
4957119 304.8.1.114 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF2102 0.76 64.0 5.81e-01 100.0% 70.0%
5035636 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.76 66.0 5.60e-01 100.0% 62.0%
5010511 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.75 66.0 6.43e-01 100.0% 90.8%
4309637 1036.1.1.1 a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 0.75 60.0 5.43e-01 100.0% 64.3%
3842726 327.11.2.18 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DTX3L_KH-like 0.75 67.0 6.50e-01 100.0% 93.8%
4943412 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.75 65.0 5.54e-01 100.0% 70.0%
4508346 304.22.1.1 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.75 60.0 5.48e-01 100.0% 66.3%
4990288 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.74 57.0 5.60e-01 100.0% 78.5%
3409644 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.74 66.0 6.30e-01 100.0% 87.1%
4033471 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.74 64.0 5.55e-01 100.0% 65.3%
4025596 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.74 64.0 6.44e-01 96.6% 96.7%
5007807 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.74 64.0 5.55e-01 100.0% 65.3%
5025590 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 64.0 5.19e-01 100.0% 53.9%
3988398 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.73 64.0 5.52e-01 100.0% 63.2%
3539399 304.8.1.10 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.73 64.0 5.29e-01 98.3% 63.8%
3987927 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.72 62.0 5.43e-01 96.6% 65.6%
3591074 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.72 64.0 5.70e-01 100.0% 71.8%
3529975 327.11.2.18 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DTX3L_KH-like 0.72 63.0 6.16e-01 100.0% 93.8%
5314 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.72 62.0 5.40e-01 100.0% 65.6%
4002427 327.11.2.13 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PNO1_2nd 0.72 62.0 5.78e-01 100.0% 93.3%
4947559 304.56.1.0 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.72 59.0 5.13e-01 100.0% 60.0%
5256 304.8.1.10 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.72 64.0 6.18e-01 100.0% 95.5%
5081509 4955.1.1.0 a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.71 64.0 5.79e-01 100.0% 82.5%
5043707 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.71 61.0 5.85e-01 100.0% 91.4%
4001238 304.34.1.0 a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases 0.71 63.0 5.58e-01 100.0% 69.4%
3738490 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.69 58.0 4.71e-01 96.6% 96.5%
3964771 327.11.2.48 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DUF7168 0.68 56.0 4.61e-01 100.0% 48.7%
3967597 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.66 55.0 5.00e-01 100.0% 74.1%
4663993 304.56.1.2 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.65 52.0 4.71e-01 100.0% 63.5%
4942688 101.1.2.28 alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.65 54.0 4.94e-01 100.0% 70.0%
4025595 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.65 57.0 5.56e-01 100.0% 90.8%
5071512 101.1.2.28 alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.65 54.0 4.65e-01 100.0% 58.9%
4943550 101.1.2.28 alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.65 53.0 4.89e-01 100.0% 70.0%
4400525 304.56.1.2 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.64 55.0 4.84e-01 100.0% 64.4%
3988425 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.63 52.0 4.76e-01 94.9% 86.3%
4435787 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.62 51.0 4.16e-01 100.0% 47.2%
4982942 101.1.2.28 alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.59 50.0 4.31e-01 100.0% 60.0%
5032696 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.59 44.0 4.05e-01 83.1% 87.5%
4984063 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 44.0 3.85e-01 91.5% 66.3%
4479128 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.54 42.0 3.15e-01 93.2% 44.3%
4310372 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.54 46.0 3.32e-01 100.0% 97.8%
3594508 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.54 45.0 3.01e-01 100.0% 40.3%
4364892 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.53 46.0 3.01e-01 100.0% 63.6%
3958918 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.77e-01 94.9% 89.5%
4232234 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.53 45.0 3.26e-01 100.0% 94.2%
4954867 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 39.0 3.73e-01 88.1% 68.0%
3928546 101.1.2.47 alpha arrays › HTH › HTH › winged helix domain › S10_plectin 0.52 41.0 3.59e-01 91.5% 69.0%
4255240 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 42.0 3.86e-01 91.5% 98.8%
5079485 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 42.0 3.70e-01 98.3% 71.0%
4325095 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.52 42.0 2.98e-01 96.6% 38.6%
4250998 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.52 42.0 3.66e-01 93.2% 100.0%
4506359 101.1.2.751 alpha arrays › HTH › HTH › winged helix domain › DUF6293_C 0.52 40.0 3.65e-01 89.8% 75.3%
5079762 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 39.0 3.57e-01 89.8% 71.8%
5042817 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 41.0 3.69e-01 96.6% 72.7%