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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00040
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00040
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 45-154
D2
high
residues 453-527
Domain cluster:
rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00039__D399-467
D3
medium
residues 373-446
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00004.36 best | AAA | 26.4 | 1.10e-05 | 100.0% | 50.4% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m6aA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.88 | 72.0 | 5.55e-01 | 100.0% | 42.7% |
| 1a5tA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.88 | 62.0 | 4.62e-01 | 100.0% | 32.3% |
| 2gnoA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.85 | 60.0 | 4.78e-01 | 100.0% | 39.7% |
| 3u61C01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.83 | 59.0 | 4.50e-01 | 100.0% | 34.0% |
| 1sxjE01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.83 | 58.0 | 4.47e-01 | 100.0% | 34.6% |
| 1iqpA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 57.0 | 4.29e-01 | 100.0% | 32.1% |
| 3vkgA07 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 73.0 | 4.53e-01 | 100.0% | 19.9% |
| 3vkhA08 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 73.0 | 4.59e-01 | 100.0% | 21.9% |
| 3vkhB09 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 73.0 | 5.34e-01 | 100.0% | 42.1% |
| 3vkgA17 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 56.0 | 4.62e-01 | 100.0% | 44.4% |
| 2qbyB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 55.0 | 4.13e-01 | 100.0% | 33.1% |
| 1r6bX04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 67.0 | 4.85e-01 | 100.0% | 37.6% |
| 2r44A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 64.0 | 4.87e-01 | 100.0% | 42.5% |
| 3vkgA05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 65.0 | 5.16e-01 | 100.0% | 51.0% |
| 3f8tA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 63.0 | 4.16e-01 | 100.0% | 25.3% |
| 7jgsD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 53.0 | 3.93e-01 | 100.0% | 32.5% |
| 4akgA12 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 58.0 | 5.02e-01 | 100.0% | 59.8% |
| 6p8vA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 60.0 | 4.24e-01 | 100.0% | 36.0% |
| 3l8uA00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.60 | 41.0 | 3.28e-01 | 100.0% | 34.4% |
| 3fefA00 | 3.90.1820.10 | Alpha Beta › Alpha-Beta Complex › LDH C-terminal domain-like › AglA-like glucosidase | 0.55 | 42.0 | 2.65e-01 | 100.0% | 14.5% |
| 3m1rB01 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.52 | 46.0 | 3.08e-01 | 100.0% | 70.4% |
| 4lw8A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.51 | 34.0 | 3.31e-01 | 86.5% | 61.2% |
| 5m43A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 40.0 | 3.19e-01 | 90.5% | 80.4% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.91 | 84.0 | 4.92e-01 | 100.0% | 14.5% | |
| 3676849 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.90 | 83.0 | 5.49e-01 | 100.0% | 28.1% |
| 5017997 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.88 | 80.0 | 4.78e-01 | 100.0% | 15.2% |
| 4566229 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.88 | 80.0 | 4.75e-01 | 100.0% | 14.7% |
| 3665658 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.88 | 62.0 | 4.75e-01 | 100.0% | 36.0% |
| 4098347 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.88 | 80.0 | 4.76e-01 | 100.0% | 15.1% |
| 3731180 | 2004.1.1.420 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, TIP49 | 0.87 | 81.0 | 5.22e-01 | 100.0% | 24.7% |
| None | — | 0.87 | 79.0 | 4.68e-01 | 100.0% | 14.7% | |
| 3510197 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.87 | 81.0 | 4.76e-01 | 100.0% | 14.2% |
| None | — | 0.87 | 81.0 | 5.43e-01 | 100.0% | 29.6% | |
| 4372262 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.86 | 80.0 | 4.99e-01 | 100.0% | 21.9% |
| 1788857 | 2004.1.1.444 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, AAA_PrkA | 0.86 | 78.0 | 5.29e-01 | 100.0% | 29.2% |
| 3781473 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.86 | 79.0 | 4.66e-01 | 100.0% | 14.5% |
| 4507179 | 1.1.9.48 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › AAA | 0.85 | 79.0 | 4.53e-01 | 100.0% | 13.2% |
| 4026992 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.85 | 76.0 | 4.52e-01 | 100.0% | 14.3% |
| 3840111 | 2004.1.1.187 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNA_pol3_delta2 | 0.85 | 58.0 | 4.89e-01 | 100.0% | 44.2% |
| 4001685 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.85 | 59.0 | 4.15e-01 | 100.0% | 25.1% |
| 3797120 | 2004.1.1.432 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 | 0.84 | 59.0 | 4.31e-01 | 100.0% | 29.2% |
| 4931895 | 2004.1.1.187 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNA_pol3_delta2 | 0.83 | 59.0 | 4.24e-01 | 100.0% | 28.4% |
| 4888760 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.81 | 75.0 | 6.17e-01 | 100.0% | 64.6% |
| 4973004 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.81 | 57.0 | 4.78e-01 | 100.0% | 45.0% |
| 3583688 | 2004.1.1.181 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_7 | 0.80 | 75.0 | 6.14e-01 | 100.0% | 61.6% |
| 3079191 | 2004.1.1.181 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_7 | 0.79 | 73.0 | 5.26e-01 | 100.0% | 40.1% |
| 3712546 | 2004.1.1.181 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_7 | 0.79 | 72.0 | 5.34e-01 | 100.0% | 42.2% |
| 4935745 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.78 | 65.0 | 4.82e-01 | 100.0% | 36.2% |
| 5063190 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.78 | 60.0 | 4.19e-01 | 100.0% | 26.5% |
| 3708220 | 2004.1.1.181 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_7 | 0.77 | 71.0 | 5.07e-01 | 100.0% | 41.5% |
| 3590003 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.77 | 69.0 | 4.68e-01 | 100.0% | 28.8% |
| 4890966 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.77 | 65.0 | 5.52e-01 | 100.0% | 57.6% |
| 3925713 | 2004.1.1.500 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5, AAA_6 | 0.77 | 62.0 | 4.29e-01 | 100.0% | 26.5% |
| 4890943 | 148.1.3.28 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_11 | 0.77 | 70.0 | 5.15e-01 | 100.0% | 41.0% |
| 4477952 | 2004.1.1.63 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FtsK_SpoIIIE | 0.77 | 60.0 | 3.98e-01 | 100.0% | 22.1% |
| 4314819 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.76 | 65.0 | 4.74e-01 | 100.0% | 35.4% |
| 4890928 | 2004.1.1.93 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynein_heavy | 0.76 | 69.0 | 4.50e-01 | 100.0% | 26.0% |
| 4890968 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.76 | 69.0 | 5.59e-01 | 100.0% | 57.4% |
| 5023501 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.76 | 66.0 | 4.47e-01 | 100.0% | 27.3% |
| 5051791 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.74 | 67.0 | 4.89e-01 | 100.0% | 38.9% |
| None | — | 0.74 | 68.0 | 5.19e-01 | 100.0% | 46.9% | |
| None | — | 0.74 | 68.0 | 5.01e-01 | 100.0% | 41.1% | |
| 5031421 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.73 | 67.0 | 4.40e-01 | 100.0% | 29.7% |
| None | — | 0.73 | 67.0 | 5.00e-01 | 100.0% | 42.3% | |
| 4947768 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.73 | 62.0 | 4.60e-01 | 100.0% | 38.9% |
| None | — | 0.72 | 66.0 | 4.82e-01 | 100.0% | 38.9% | |
| 3435798 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 58.0 | 4.32e-01 | 100.0% | 35.1% |
| 3580698 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.71 | 64.0 | 4.77e-01 | 100.0% | 40.6% |
| 3971117 | 2004.1.1.153 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 | 0.71 | 65.0 | 4.37e-01 | 100.0% | 35.7% |
| 3700673 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 63.0 | 4.82e-01 | 100.0% | 50.0% |
| 3194715 | 2004.1.1.154 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 | 0.71 | 63.0 | 4.23e-01 | 100.0% | 40.0% |
| 5080464 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.70 | 53.0 | 4.04e-01 | 100.0% | 34.9% |
| 4091103 | 2004.1.1.258 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA,AAA_2 | 0.70 | 63.0 | 4.08e-01 | 100.0% | 25.9% |
| 4102348 | 2004.1.1.493 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, AAA_2, AAA_5 | 0.69 | 62.0 | 3.98e-01 | 100.0% | 24.8% |
| 4275455 | 2004.1.1.258 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA,AAA_2 | 0.69 | 62.0 | 3.98e-01 | 100.0% | 24.8% |
| 4934938 | 2004.1.1.173 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TrwB_AAD_bind | 0.69 | 55.0 | 3.37e-01 | 100.0% | 15.6% |
| 5063317 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 55.0 | 4.01e-01 | 100.0% | 32.8% |
| 3248250 | 2004.1.1.154 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 | 0.69 | 62.0 | 3.90e-01 | 100.0% | 23.3% |
| 4039355 | 2004.1.1.258 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA,AAA_2 | 0.69 | 62.0 | 3.93e-01 | 100.0% | 23.7% |
| 3371342 | 2004.1.1.153 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 | 0.68 | 61.0 | 4.10e-01 | 100.0% | 34.5% |
| 3710814 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.67 | 59.0 | 5.02e-01 | 100.0% | 60.0% |
| 3649603 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 59.0 | 4.18e-01 | 100.0% | 44.9% |
| 4444758 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.66 | 55.0 | 3.97e-01 | 100.0% | 33.8% |
| 3205558 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.65 | 54.0 | 4.19e-01 | 100.0% | 42.6% |
| 3669453 | 2004.1.1.153 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 | 0.65 | 58.0 | 4.06e-01 | 100.0% | 42.1% |
| 3331574 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 57.0 | 4.04e-01 | 98.6% | 41.3% |
| 3618060 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.65 | 53.0 | 4.06e-01 | 100.0% | 40.0% |
| 4927326 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.63 | 52.0 | 3.83e-01 | 100.0% | 33.2% |
| 3744214 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.63 | 52.0 | 3.78e-01 | 100.0% | 33.5% |
| 3319947 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 56.0 | 4.17e-01 | 100.0% | 43.2% |
| 5032125 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 50.0 | 3.47e-01 | 100.0% | 28.1% |
| 3269016 | 2492.1.1.6 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › A_deamin | 0.57 | 49.0 | 3.20e-01 | 100.0% | 25.5% |
| 3251251 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 39.0 | 3.29e-01 | 94.6% | 43.4% |