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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00083

Bact-Vir

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00083

Identity

Kingdom:
phage

Quality

86.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 554-645
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17210.10 best SdrD_B 36.7 5.80e-09 92.4% 55.4%
CATH (89)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jdzA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.87 82.0 7.51e-01 100.0% 94.8%
3rfzB04 2.60.40.2610 Mainly Beta › Sandwich › Immunoglobulin-like › Outer membrane usher protein FimD, plug domain 0.85 68.0 6.86e-01 100.0% 84.6%
1ti2B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.85 70.0 7.32e-01 100.0% 94.0%
3phsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.83 78.0 7.32e-01 100.0% 95.4%
7lhgC02 2.60.40.2610 Mainly Beta › Sandwich › Immunoglobulin-like › Outer membrane usher protein FimD, plug domain 0.82 65.0 6.47e-01 100.0% 80.9%
3kptA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.80 75.0 7.14e-01 100.0% 97.2%
4hssB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.80 76.0 6.65e-01 100.0% 91.3%
4oq1A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.79 74.0 6.94e-01 100.0% 96.3%
2pz4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.78 74.0 6.62e-01 100.0% 98.4%
3kptB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.78 74.0 6.96e-01 100.0% 91.7%
5yxgB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.78 72.0 6.45e-01 98.9% 96.0%
1uwyA02 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.78 65.0 6.42e-01 97.8% 83.5%
3hr6A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.78 72.0 6.38e-01 100.0% 98.4%
1nkgA02 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.77 62.0 6.50e-01 100.0% 91.8%
3irzA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.77 73.0 7.14e-01 100.0% 93.9%
6ixyA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.77 71.0 6.12e-01 98.9% 100.0%
2l4oA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.77 70.0 5.61e-01 100.0% 89.1%
4uzgA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.77 72.0 6.46e-01 100.0% 92.6%
4p0dA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.76 70.0 6.48e-01 98.9% 96.5%
2xtlA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.76 69.0 6.30e-01 98.9% 96.7%
4iykA01 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.75 65.0 6.55e-01 100.0% 93.5%
4fxtA01 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.75 65.0 6.68e-01 100.0% 98.8%
2y1vA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.75 69.0 5.36e-01 98.9% 95.7%
4eiuA01 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.74 70.0 6.66e-01 100.0% 98.1%
1r6vA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.74 69.0 6.46e-01 100.0% 97.3%
4oq1A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.74 69.0 6.69e-01 100.0% 94.1%
4yokA01 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.74 68.0 6.74e-01 100.0% 95.7%
2ww8A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.74 69.0 6.17e-01 100.0% 97.6%
2xi9B01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 65.0 6.20e-01 98.9% 90.7%
1b4rA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.71 50.0 5.35e-01 89.1% 85.0%
1l0qA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 49.0 4.97e-01 90.2% 73.3%
1hnfA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 49.0 5.17e-01 90.2% 86.1%
2fcbA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 51.0 5.22e-01 90.2% 85.1%
2q7nA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 49.0 5.18e-01 92.4% 87.7%
2c4xA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 51.0 5.08e-01 90.2% 78.7%
4gqzA00 2.60.40.3700 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 60.0 5.01e-01 100.0% 62.8%
4jguA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 49.0 4.91e-01 89.1% 75.8%
3l48A01 2.60.40.2070 Mainly Beta › Sandwich › Immunoglobulin-like › PapC, C-terminal domain 0.66 51.0 5.46e-01 96.7% 100.0%
1lxmA04 2.60.40.1380 Mainly Beta › Sandwich › Immunoglobulin-like › E set domains; domain 4 0.65 42.0 4.62e-01 91.3% 80.3%
5oj2B01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 44.0 4.59e-01 89.1% 76.7%
1wgoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 50.0 4.92e-01 90.2% 77.8%
4nzjA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 46.0 4.66e-01 89.1% 76.9%
1cidA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 43.0 4.75e-01 85.9% 90.1%
3pddA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 50.0 4.92e-01 91.3% 77.2%
5iqlA00 2.60.40.1970 Mainly Beta › Sandwich › Immunoglobulin-like › YEATS domain 0.64 56.0 5.05e-01 100.0% 73.8%
1o14A02 2.20.150.10 Mainly Beta › Single Sheet › putative 5-dehydro-2- deoxygluconokinase like fold › putative 5-dehydro-2- deoxygluconokinase 0.64 32.0 3.98e-01 100.0% 81.1%
2y7qA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 47.0 4.80e-01 89.1% 82.0%
7p0eA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 49.0 4.78e-01 87.0% 75.8%
3v9fA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 49.0 4.52e-01 89.1% 65.3%
4e9sA02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.62 49.0 4.26e-01 89.1% 97.4%
3rlsB00 2.60.40.1970 Mainly Beta › Sandwich › Immunoglobulin-like › YEATS domain 0.61 54.0 4.69e-01 100.0% 63.9%
3lsoA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 50.0 5.01e-01 89.1% 89.1%
3ottB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 49.0 4.44e-01 90.2% 65.3%
3zs3A00 2.60.110.10 Mainly Beta › Sandwich › Thaumatin › Thaumatin 0.60 54.0 4.04e-01 98.9% 100.0%
2oz4A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 42.0 4.34e-01 89.1% 80.0%
4bxsV03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.59 48.0 3.24e-01 88.0% 40.8%
3bpnC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 45.0 4.54e-01 89.1% 81.7%
1cwvA04 2.60.40.1080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 42.0 4.22e-01 85.9% 75.8%
2oz4A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 41.0 4.24e-01 90.2% 80.7%
4a2lB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 46.0 4.24e-01 90.2% 65.0%
1gycA02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.58 46.0 3.80e-01 88.0% 81.9%
3i57A02 2.60.40.4300 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 50.0 4.76e-01 100.0% 79.8%
2kl6A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 46.0 4.44e-01 89.1% 79.6%
5mj3A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 4.34e-01 85.9% 83.9%
1bq5A01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.57 45.0 3.93e-01 88.0% 79.5%
2cuaB00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.57 45.0 4.09e-01 88.0% 69.7%
3gdcA02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.57 46.0 4.15e-01 89.1% 97.7%
3q48A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 40.0 4.22e-01 94.6% 84.3%
5fc9A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.56 45.0 4.47e-01 87.0% 100.0%
1bq5A02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.56 45.0 3.76e-01 88.0% 90.4%
1fwxA02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.56 44.0 4.08e-01 87.0% 77.7%
1bxvA00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.56 44.0 4.42e-01 85.9% 100.0%
1cjyA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.56 50.0 4.52e-01 100.0% 90.5%
5ngjA01 2.60.40.1080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 39.0 4.10e-01 88.0% 83.3%
2dv6A01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.55 44.0 4.19e-01 89.1% 97.3%
2ux6A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.55 44.0 4.04e-01 87.0% 74.6%
2xg5A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 4.37e-01 95.7% 85.9%
4f7kA01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.54 42.0 3.88e-01 87.0% 98.4%
2nq3A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 46.0 4.20e-01 100.0% 88.5%
1jerA00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.54 44.0 4.16e-01 89.1% 96.4%
3a57A00 2.60.270.30 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Vibrio parahaemolyticus thermostable direct hemolysin 0.54 47.0 4.02e-01 100.0% 90.9%
2yevB02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.54 47.0 3.59e-01 100.0% 82.3%
3g7mA00 2.60.110.10 Mainly Beta › Sandwich › Thaumatin › Thaumatin 0.53 45.0 3.94e-01 97.8% 99.3%
1gmiA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 46.0 4.16e-01 100.0% 88.1%
6hbeA01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 41.0 3.70e-01 85.9% 72.2%
2l7eA00 2.60.40.1970 Mainly Beta › Sandwich › Immunoglobulin-like › YEATS domain 0.52 43.0 4.00e-01 100.0% 70.7%
5tk2B00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.51 41.0 4.17e-01 87.0% 100.0%
1id2A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.50 39.0 3.78e-01 85.9% 98.1%
3ef4A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.50 43.0 3.96e-01 97.8% 91.9%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4982156 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.92 74.0 7.68e-01 100.0% 89.4%
3971790 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.91 75.0 8.10e-01 100.0% 98.8%
5031148 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.91 78.0 8.19e-01 100.0% 96.5%
4949418 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.91 72.0 7.74e-01 100.0% 95.0%
4004343 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.90 75.0 7.78e-01 100.0% 92.9%
5081650 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.90 62.0 7.34e-01 88.0% 100.0%
3981644 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.89 73.0 7.84e-01 100.0% 98.8%
4931458 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.88 70.0 7.23e-01 100.0% 87.5%
4478277 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.87 68.0 7.44e-01 98.9% 98.7%
4484497 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.87 67.0 7.43e-01 98.9% 98.7%
5027327 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.87 71.0 7.45e-01 100.0% 91.8%
4980188 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.87 73.0 7.37e-01 100.0% 88.9%
4119227 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.87 69.0 7.43e-01 100.0% 96.2%
5043898 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.86 73.0 7.60e-01 98.9% 95.3%
4959653 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.86 67.0 7.36e-01 100.0% 98.7%
3999794 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.86 66.0 7.30e-01 97.8% 98.7%
3970113 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.86 68.0 7.24e-01 100.0% 95.0%
4119228 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.86 68.0 7.24e-01 100.0% 95.0%
5081649 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.86 66.0 7.26e-01 98.9% 98.7%
5079864 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.86 61.0 6.40e-01 90.2% 80.0%
3946083 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.86 68.0 7.10e-01 100.0% 90.6%
4960859 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.85 66.0 7.20e-01 98.9% 98.7%
2411357 11.1.4.36 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA 0.85 74.0 7.67e-01 100.0% 97.7%
5080808 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.85 59.0 6.56e-01 89.1% 88.0%
3968394 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.85 67.0 7.19e-01 98.9% 95.0%
5007187 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.85 65.0 7.16e-01 97.8% 97.3%
4949419 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.85 68.0 7.31e-01 100.0% 97.5%
3390209 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.85 65.0 7.18e-01 95.7% 98.7%
4970102 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.85 73.0 7.45e-01 100.0% 92.2%
4572268 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.85 64.0 7.07e-01 98.9% 97.3%
5020365 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.85 59.0 6.31e-01 85.9% 82.5%
4281976 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.84 67.0 6.95e-01 100.0% 89.4%
4949417 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.84 67.0 7.20e-01 100.0% 96.2%
3539597 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.84 68.0 7.24e-01 100.0% 97.5%
4200814 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.84 67.0 7.02e-01 100.0% 90.6%
3509815 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.84 67.0 6.69e-01 100.0% 81.1%
4968836 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.84 66.0 7.31e-01 94.6% 100.0%
4010206 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.84 66.0 6.90e-01 100.0% 89.4%
5003442 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.83 59.0 6.18e-01 88.0% 80.0%
4980190 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.83 74.0 7.47e-01 100.0% 95.6%
1178824 11.1.4.36 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA 0.83 78.0 7.11e-01 100.0% 88.9%
4985819 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.83 57.0 6.32e-01 89.1% 88.0%
4968630 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.83 70.0 7.14e-01 100.0% 91.1%
5057938 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.82 76.0 7.40e-01 100.0% 95.0%
3816864 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.82 75.0 6.84e-01 100.0% 91.7%
5020364 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.82 58.0 6.22e-01 90.2% 85.0%
3448678 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.81 75.0 6.37e-01 100.0% 91.0%
5021534 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.81 58.0 6.20e-01 90.2% 85.0%
5081236 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.81 63.0 6.38e-01 90.2% 82.2%
5079867 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.81 61.0 6.37e-01 88.0% 84.7%
5079866 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.81 63.0 6.37e-01 90.2% 82.2%
5069739 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.81 70.0 7.25e-01 98.9% 97.6%
5003441 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.81 58.0 6.17e-01 90.2% 85.0%
3979471 11.1.4.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher 0.81 64.0 6.86e-01 100.0% 96.2%
5081235 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.81 62.0 4.91e-01 90.2% 42.3%
5039363 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.80 60.0 6.06e-01 94.6% 78.9%
3256720 11.1.4.34 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SdrD_B 0.80 74.0 6.75e-01 100.0% 97.5%
4969983 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.80 59.0 6.18e-01 89.1% 83.5%
4981570 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.79 62.0 4.17e-01 90.2% 25.0%
3366196 11.1.4.8 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Pollen_Ole_e_1 0.79 72.0 6.20e-01 100.0% 83.6%
3803901 11.1.4.8 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Pollen_Ole_e_1 0.79 71.0 6.19e-01 100.0% 83.6%
3999804 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.78 74.0 6.92e-01 100.0% 96.4%
3829376 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.78 71.0 6.05e-01 100.0% 89.0%
3299989 11.1.4.8 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Pollen_Ole_e_1 0.78 71.0 6.19e-01 100.0% 85.2%
3545438 11.1.4.75 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO_3rd 0.78 74.0 6.73e-01 100.0% 96.5%
5056538 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.77 60.0 5.67e-01 91.3% 68.2%
5081598 11.1.1.1410 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CarboxypepD_reg 0.77 59.0 6.14e-01 91.3% 85.9%
3309909 11.1.4.75 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO_3rd 0.77 73.0 6.96e-01 100.0% 99.0%
3331651 11.1.4.8 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Pollen_Ole_e_1 0.77 70.0 6.03e-01 100.0% 90.0%
3575103 11.1.4.75 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO_3rd 0.76 72.0 6.37e-01 100.0% 96.0%
1162836 11.1.4.19 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF3823 0.75 65.0 6.61e-01 100.0% 95.6%
5018096 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.75 70.0 6.83e-01 100.0% 93.0%
5033160 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.74 68.0 6.79e-01 100.0% 93.7%
3321854 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.74 67.0 5.99e-01 100.0% 85.4%
1290861 11.1.4.36 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA 0.74 69.0 6.69e-01 100.0% 94.1%
5037617 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.74 59.0 6.27e-01 97.8% 97.5%
3370130 11.1.4.16 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › EMC7_beta-sandw 0.72 68.0 6.22e-01 100.0% 87.0%
5061782 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.72 59.0 6.13e-01 87.0% 100.0%
3817300 11.1.4.27 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › fn3_3 0.72 67.0 6.15e-01 100.0% 88.7%
4221319 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.71 59.0 6.01e-01 100.0% 93.3%
5050314 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 51.0 5.05e-01 89.1% 72.6%
4438254 11.1.4.27 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › fn3_3 0.70 63.0 6.42e-01 100.0% 98.9%
4979838 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 52.0 5.33e-01 89.1% 80.0%
4945063 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 51.0 5.24e-01 89.1% 78.9%
5027231 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 51.0 5.33e-01 89.1% 83.5%
3451979 11.1.4.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF7152 0.68 63.0 6.12e-01 100.0% 92.0%
5027435 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 51.0 5.11e-01 90.2% 76.8%
5077858 11.1.1.94 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Y_Y_Y 0.67 50.0 4.86e-01 88.0% 71.0%
5073098 11.1.1.246 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 0.67 50.0 5.14e-01 90.2% 81.1%
4945316 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 48.0 4.84e-01 87.0% 76.7%
4981481 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 50.0 5.08e-01 89.1% 82.2%
5001521 11.1.1.246 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 0.66 50.0 4.94e-01 90.2% 76.8%
3309891 11.1.4.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF7152 0.66 60.0 5.82e-01 100.0% 92.0%
5068606 11.1.1.284 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.65 50.0 5.10e-01 90.2% 84.4%
5081847 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 49.0 5.09e-01 88.0% 87.1%
3519691 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.64 58.0 5.65e-01 100.0% 92.0%
5062811 11.1.1.15 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD 0.64 52.0 3.61e-01 89.1% 27.2%
5039462 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 47.0 4.92e-01 88.0% 84.7%
5062142 11.1.1.284 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.63 49.0 4.91e-01 90.2% 81.1%
5060929 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 48.0 4.75e-01 89.1% 81.1%
D2 medium residues 62-190_527-541
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.71 65.0 4.28e-01 96.5% 100.0%
2hdiA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.70 65.0 4.37e-01 97.2% 100.0%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.69 58.0 4.41e-01 87.5% 54.1%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.68 57.0 3.98e-01 86.8% 36.1%
1fepA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.66 61.0 4.02e-01 97.2% 100.0%
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.65 60.0 4.16e-01 97.2% 99.0%
3v89A02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.64 53.0 3.46e-01 87.5% 30.3%
6wimA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.63 52.0 3.82e-01 86.8% 78.1%
3cslA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.63 58.0 3.69e-01 97.9% 99.7%
6fokB01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.61 56.0 3.57e-01 97.2% 82.6%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.60 54.0 4.02e-01 97.2% 91.7%
5dl8A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.58 51.0 3.78e-01 96.5% 98.7%
2porA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.58 47.0 3.70e-01 86.1% 42.2%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.57 48.0 3.71e-01 86.8% 49.1%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.57 50.0 3.82e-01 97.2% 100.0%
3sybA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.57 50.0 3.67e-01 97.9% 91.9%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.53 47.0 4.15e-01 94.4% 91.2%
1dwnA00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.53 36.0 3.84e-01 88.2% 78.0%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.52 41.0 4.12e-01 82.6% 97.3%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.51 43.0 4.01e-01 87.5% 87.9%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.51 42.0 3.68e-01 86.8% 62.0%
3eniC00 2.50.10.10 Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A 0.51 46.0 3.43e-01 98.6% 69.9%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 29.0 2.67e-01 85.4% 39.9%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.50 42.0 3.54e-01 89.6% 76.4%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.50 35.0 3.65e-01 84.0% 77.9%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1716634 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.71 65.0 4.31e-01 97.2% 99.4%
1760802 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.71 66.0 4.44e-01 97.2% 99.4%
4281349 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.71 59.0 4.09e-01 86.8% 31.1%
None 0.70 64.0 4.28e-01 95.8% 99.8%
3979477 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.69 64.0 4.42e-01 100.0% 97.4%
4604561 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.68 57.0 4.12e-01 87.5% 45.9%
4008074 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.68 63.0 4.40e-01 100.0% 96.4%
3942540 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.68 63.0 4.33e-01 100.0% 95.5%
4107065 11.1.1.11 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Usher 0.68 62.0 4.30e-01 100.0% 94.9%
4646283 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.68 63.0 4.37e-01 100.0% 94.8%
3981154 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.68 63.0 4.39e-01 100.0% 95.4%
4500128 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.67 62.0 4.33e-01 100.0% 96.4%
3945603 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.67 62.0 4.32e-01 100.0% 96.2%
3519720 5084.8.1.3 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher_TcfC 0.67 62.0 4.28e-01 99.3% 96.5%
3946102 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.67 62.0 4.38e-01 100.0% 97.1%
3969715 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.66 55.0 3.66e-01 88.2% 45.9%
3387592 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.62 52.0 3.80e-01 86.8% 76.6%
28449 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.57 48.0 3.71e-01 86.8% 49.1%
4025861 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.57 40.0 3.76e-01 80.6% 60.6%
4038477 5084.3.1.3 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 0.56 45.0 3.52e-01 86.1% 47.9%
3408433 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.53 36.0 2.93e-01 70.1% 38.2%
200662 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.52 46.0 4.09e-01 94.4% 91.3%
4971555 9.13.1.3 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 0.52 37.0 3.72e-01 84.0% 72.2%
3968185 5085.1.1.1 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.52 39.0 2.77e-01 78.5% 63.9%
147643 522.1.1.1 a+b two layers › Bacteriochlorophyll A protein › Bacteriochlorophyll A protein › Bacteriochlorophyll A protein › BChl_A 0.51 46.0 3.44e-01 98.6% 69.7%
3980865 5084.1.1.11 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.50 45.0 3.65e-01 97.2% 91.5%
874 9.13.1.3 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 0.50 35.0 3.65e-01 84.0% 77.9%
D3 medium residues 423-526
PDB
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hdiA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.90 75.0 4.70e-01 100.0% 19.3%
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.81 76.0 4.70e-01 100.0% 22.0%
1xkwA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.80 77.0 4.70e-01 100.0% 21.8%
3fhhA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.79 75.0 4.65e-01 100.0% 24.3%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.79 75.0 4.82e-01 100.0% 27.1%
3qlbA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.79 75.0 4.56e-01 100.0% 21.9%
4aipC02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.76 70.0 4.34e-01 100.0% 31.4%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.73 68.0 4.71e-01 100.0% 41.4%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.70 66.0 4.43e-01 100.0% 31.7%
3vy8X00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.70 64.0 4.38e-01 100.0% 32.8%
1tk1A00 3.40.1500.10 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic 0.65 60.0 4.62e-01 100.0% 59.8%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.64 55.0 4.83e-01 100.0% 62.6%
4uv3E01 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.63 49.0 3.89e-01 80.8% 70.9%
1i78B00 2.40.128.90 Mainly Beta › Beta Barrel › Lipocalin › OMPT-like 0.63 58.0 4.16e-01 100.0% 56.1%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.62 57.0 4.28e-01 100.0% 50.8%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 48.0 4.05e-01 100.0% 50.6%
4fqeA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.60 45.0 3.80e-01 100.0% 47.1%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.60 55.0 4.01e-01 100.0% 49.5%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.60 54.0 4.35e-01 100.0% 51.2%
3kvnA02 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.60 54.0 3.87e-01 100.0% 42.2%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.60 50.0 3.72e-01 100.0% 36.8%
5da9A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 43.0 2.97e-01 76.0% 36.9%
1swgC00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.58 41.0 3.85e-01 77.9% 59.5%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.57 51.0 4.34e-01 100.0% 64.9%
4eg9A00 2.50.20.40 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.56 48.0 3.72e-01 95.2% 42.4%
2q03A00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.55 37.0 3.48e-01 80.8% 54.1%
1d6uA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.54 47.0 3.23e-01 99.0% 71.5%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.53 46.0 3.53e-01 100.0% 41.7%
1fx3B00 3.10.420.10 Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like 0.52 41.0 3.64e-01 83.7% 62.4%
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.52 47.0 4.00e-01 100.0% 67.4%
2r76A00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.52 43.0 3.98e-01 90.4% 95.5%
3zpmA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.51 45.0 3.61e-01 100.0% 77.3%
2pfcA00 3.10.129.30 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Rv0098, thioesterase-like hot dog domain 0.50 38.0 3.22e-01 77.9% 81.2%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1760411 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.92 67.0 7.58e-01 92.3% 95.1%
3947597 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.82 79.0 5.43e-01 100.0% 36.3%
3942123 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.80 76.0 4.85e-01 100.0% 28.6%
3716267 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.80 53.0 3.62e-01 100.0% 21.3%
3975037 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.78 74.0 4.72e-01 100.0% 29.0%
3941401 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.78 71.0 4.62e-01 100.0% 25.3%
3515197 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.78 58.0 4.80e-01 79.8% 47.1%
3964588 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.75 70.0 4.86e-01 100.0% 42.7%
2141087 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.74 63.0 4.33e-01 100.0% 27.1%
3594654 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.72 67.0 4.49e-01 100.0% 44.1%
4880357 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.71 59.0 5.37e-01 100.0% 67.9%
3968681 5084.5.1.4 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.70 66.0 4.24e-01 100.0% 26.2%
3966665 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.70 66.0 4.22e-01 100.0% 26.0%
3405242 5084.5.1.37 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.69 53.0 4.39e-01 100.0% 46.4%
4339571 5084.5.4.0 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein 0.68 62.0 4.08e-01 100.0% 25.4%
3933957 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.67 57.0 4.92e-01 100.0% 59.4%
3964794 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.67 62.0 4.67e-01 100.0% 44.6%
3965708 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.67 62.0 4.65e-01 100.0% 50.8%
3971437 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.65 53.0 4.11e-01 100.0% 41.3%
4278291 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.65 60.0 4.20e-01 100.0% 44.4%
3481193 867.1.1.0 a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase 0.63 58.0 4.03e-01 100.0% 45.8%
3203073 867.1.1.1 a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coprogen_oxidas 0.63 57.0 3.88e-01 100.0% 43.0%
3385752 5084.5.4.7 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › DUF2860 0.62 56.0 4.05e-01 100.0% 36.3%
4873102 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.62 44.0 4.09e-01 100.0% 59.2%
3968185 5085.1.1.1 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.61 56.0 3.65e-01 100.0% 60.7%
4329332 5084.5.1.18 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C 0.61 56.0 3.74e-01 100.0% 54.1%
3981044 867.1.1.1 a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coprogen_oxidas 0.61 55.0 4.03e-01 98.1% 85.0%
3164124 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.61 44.0 4.25e-01 76.0% 83.3%
885 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.60 55.0 4.01e-01 100.0% 49.5%
3704753 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.59 43.0 3.25e-01 76.0% 55.0%
3970343 5084.5.1.24 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Gcw_chp 0.58 53.0 4.11e-01 99.0% 47.9%
3594616 1100.1.1.0 beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein 0.56 51.0 3.86e-01 100.0% 42.0%
3965061 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.56 50.0 3.77e-01 100.0% 58.5%
4222629 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.53 48.0 4.22e-01 100.0% 72.3%
4116729 5084.1.1.6 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OprF 0.53 48.0 4.05e-01 100.0% 64.7%
3366447 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 37.0 3.33e-01 76.9% 80.6%