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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00136
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00136
Identity
- Kingdom:
- phage
Quality
78.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-79
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7qprA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.65 | 59.0 | 4.82e-01 | 100.0% | 83.0% |
| 3q9oA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.63 | 45.0 | 3.60e-01 | 77.6% | 96.4% |
| 7ztbB01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.61 | 54.0 | 4.22e-01 | 100.0% | 75.5% |
| 4isbB02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.59 | 53.0 | 4.73e-01 | 100.0% | 78.5% |
| 3gkuC02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.59 | 52.0 | 5.02e-01 | 100.0% | 91.0% |
| 4r60A01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.58 | 47.0 | 3.72e-01 | 90.8% | 84.0% |
| 4mh4A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.58 | 50.0 | 4.73e-01 | 98.7% | 97.9% |
| 1cnzA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.54 | 43.0 | 2.86e-01 | 92.1% | 92.8% |
| 3il0A00 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.53 | 41.0 | 3.58e-01 | 89.5% | 99.2% |
| 3ju8A02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.50 | 38.0 | 2.86e-01 | 100.0% | 32.5% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3199492 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.78 | 58.0 | 5.88e-01 | 100.0% | 78.7% |
| 3203393 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.77 | 58.0 | 6.24e-01 | 100.0% | 92.3% |
| 4968492 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.69 | 62.0 | 3.79e-01 | 100.0% | 27.9% |
| 3364011 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.65 | 56.0 | 3.65e-01 | 100.0% | 21.3% |
| 4821392 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.64 | 57.0 | 4.89e-01 | 97.4% | 90.8% |
| 5022458 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.63 | 56.0 | 4.67e-01 | 97.4% | 67.7% |
| 1349807 | 316.1.1.34 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DncV-like_NTFase | 0.58 | 36.0 | 2.64e-01 | 94.7% | 21.6% |
| 4223068 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.58 | 51.0 | 4.26e-01 | 100.0% | 73.3% |
| 3930986 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.55 | 46.0 | 4.16e-01 | 92.1% | 72.4% |
| 4942627 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.55 | 45.0 | 3.67e-01 | 92.1% | 53.3% |
| 5050743 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.55 | 46.0 | 3.68e-01 | 93.4% | 58.1% |
| 4938091 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.55 | 45.0 | 3.74e-01 | 92.1% | 56.4% |
| 5030332 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.53 | 43.0 | 3.33e-01 | 92.1% | 48.0% |
| 3697159 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.51 | 44.0 | 2.84e-01 | 100.0% | 50.9% |
| 5044571 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.51 | 43.0 | 2.97e-01 | 100.0% | 44.0% |
| 3111953 | 304.4.1.5 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dyp_perox_N | 0.50 | 42.0 | 3.56e-01 | 100.0% | 73.2% |