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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00189
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00189
Identity
- Kingdom:
- phage
Quality
84.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 51-71_170-181_350-464_523-550_570-618
Domain cluster:
rep: aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00112__D438-482_516-700
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fx5A02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.81 | 65.0 | 7.17e-01 | 94.2% | 99.5% |
| 4wfqA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.80 | 66.0 | 7.12e-01 | 94.2% | 97.9% |
| 7xlqD02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.79 | 64.0 | 6.92e-01 | 95.1% | 97.4% |
| 3gxbA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.78 | 60.0 | 6.76e-01 | 94.2% | 99.4% |
| 1shuX00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.77 | 60.0 | 6.63e-01 | 95.1% | 97.8% |
| 4igiA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.77 | 62.0 | 6.61e-01 | 95.1% | 94.4% |
| 1bho100 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.77 | 63.0 | 6.82e-01 | 93.8% | 100.0% |
| 6snkA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.77 | 60.0 | 6.64e-01 | 94.2% | 98.9% |
| 1lfaA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.76 | 60.0 | 6.58e-01 | 95.1% | 99.5% |
| 1aoxA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.74 | 62.0 | 6.52e-01 | 95.1% | 96.5% |
| 4f1jA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.72 | 61.0 | 6.45e-01 | 94.2% | 97.5% |
| 3ibsA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.72 | 63.0 | 6.63e-01 | 94.7% | 99.5% |
| 2i6qA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.68 | 61.0 | 6.21e-01 | 96.4% | 95.4% |
| 6cv6D00 | 3.40.50.9100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II | 0.68 | 44.0 | 5.37e-01 | 93.3% | 100.0% |
| 1q0pA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.67 | 55.0 | 6.00e-01 | 92.0% | 100.0% |
| 2l69A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 38.0 | 4.78e-01 | 93.3% | 93.3% |
| 6norA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 38.0 | 4.61e-01 | 93.3% | 91.8% |
| 2lndA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 30.0 | 4.20e-01 | 93.8% | 92.9% |
| 2a1iA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 32.0 | 4.29e-01 | 94.2% | 100.0% |
| 2ziuB01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 36.0 | 4.32e-01 | 95.1% | 94.6% |
| 2b34A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.56 | 39.0 | 4.17e-01 | 94.2% | 82.3% |
| 1piwA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 31.0 | 3.87e-01 | 85.3% | 88.3% |
| 5lddC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 40.0 | 4.50e-01 | 94.7% | 98.2% |
| 1c25A00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.55 | 28.0 | 3.24e-01 | 90.2% | 65.2% |
| 2bgwB01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 32.0 | 4.15e-01 | 93.8% | 99.2% |
| 2bmjA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 40.0 | 4.51e-01 | 96.0% | 97.1% |
| 2cf5A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 32.0 | 3.70e-01 | 89.3% | 80.3% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 32.0 | 4.11e-01 | 94.7% | 99.2% |
| 2o3rA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 28.0 | 3.73e-01 | 89.8% | 92.7% |
| 5xc5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 38.0 | 4.37e-01 | 94.7% | 100.0% |
| 4yhbA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.53 | 31.0 | 3.92e-01 | 75.1% | 97.0% |
| 1xmxA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 34.0 | 4.15e-01 | 94.2% | 99.3% |
| 3fvwB00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.52 | 41.0 | 4.49e-01 | 94.2% | 100.0% |
| 3oy2A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 40.0 | 3.98e-01 | 94.2% | 76.3% |
| 5g0gA00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.51 | 45.0 | 3.84e-01 | 94.7% | 89.7% |
| 5ji5A00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.51 | 45.0 | 4.03e-01 | 93.8% | 100.0% |
| 2c0cA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 32.0 | 3.57e-01 | 89.3% | 78.2% |
| 2btoA01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.50 | 44.0 | 4.25e-01 | 94.7% | 94.7% |
| 1c3pA00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.50 | 44.0 | 3.73e-01 | 94.2% | 84.7% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3459200 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.82 | 68.0 | 7.15e-01 | 95.1% | 92.7% |
| 5024101 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.82 | 65.0 | 6.89e-01 | 94.7% | 89.7% |
| 2840984 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.82 | 65.0 | 7.16e-01 | 93.8% | 99.5% |
| 3529481 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.81 | 64.0 | 6.93e-01 | 94.7% | 94.7% |
| 3437462 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.80 | 61.0 | 6.69e-01 | 94.2% | 94.6% |
| 418413 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.80 | 61.0 | 6.73e-01 | 94.7% | 95.7% |
| 4970681 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.79 | 58.0 | 6.14e-01 | 93.3% | 82.4% |
| 3531630 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.79 | 66.0 | 7.06e-01 | 94.7% | 98.5% |
| 4943521 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.79 | 58.0 | 5.78e-01 | 93.3% | 72.2% |
| 4989225 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.78 | 66.0 | 7.05e-01 | 95.6% | 97.5% |
| 3364267 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.78 | 52.0 | 6.26e-01 | 93.8% | 97.4% |
| 3779733 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.78 | 62.0 | 4.25e-01 | 93.8% | 26.2% |
| 5028554 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.78 | 66.0 | 6.99e-01 | 96.4% | 97.5% |
| 5050720 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.78 | 59.0 | 5.86e-01 | 93.3% | 75.5% |
| 3558981 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 60.0 | 6.74e-01 | 94.7% | 100.0% |
| 3260278 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 66.0 | 6.75e-01 | 93.8% | 90.5% |
| 3746716 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 62.0 | 6.71e-01 | 94.7% | 95.9% |
| 3859831 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.77 | 62.0 | 6.05e-01 | 94.7% | 77.1% |
| 3238571 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 63.0 | 6.82e-01 | 94.2% | 98.9% |
| 3774129 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 62.0 | 6.62e-01 | 95.1% | 93.5% |
| 3938939 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 62.0 | 6.61e-01 | 95.1% | 94.9% |
| 3898838 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 63.0 | 6.75e-01 | 95.6% | 96.9% |
| 5037117 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 66.0 | 6.92e-01 | 95.1% | 96.6% |
| 1125306 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 62.0 | 6.61e-01 | 95.1% | 94.4% |
| 3841897 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 63.0 | 4.93e-01 | 95.1% | 44.2% |
| 5052615 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.77 | 62.0 | 6.46e-01 | 95.1% | 89.5% |
| None | — | 0.76 | 68.0 | 6.97e-01 | 94.7% | 94.5% | |
| 3768874 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 61.0 | 6.45e-01 | 94.7% | 90.2% |
| 3232574 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.76 | 60.0 | 6.55e-01 | 94.7% | 97.3% |
| 3878911 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 57.0 | 6.48e-01 | 94.7% | 98.9% |
| 3882106 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 62.0 | 6.30e-01 | 95.1% | 85.5% |
| 3227105 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 61.0 | 6.58e-01 | 94.7% | 95.4% |
| 3777176 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 62.0 | 5.05e-01 | 94.7% | 48.5% |
| 3974415 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 67.0 | 6.94e-01 | 94.7% | 96.7% |
| 3514419 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 61.0 | 6.58e-01 | 95.1% | 95.9% |
| 2642990 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 61.0 | 6.62e-01 | 94.2% | 98.4% |
| 3933625 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.75 | 60.0 | 6.26e-01 | 95.6% | 87.6% |
| 3218086 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.75 | 59.0 | 6.37e-01 | 93.8% | 94.2% |
| 3331343 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.75 | 51.0 | 6.17e-01 | 93.3% | 100.0% |
| 3607142 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.75 | 61.0 | 6.67e-01 | 94.7% | 100.0% |
| 5049201 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.75 | 61.0 | 6.37e-01 | 94.7% | 90.5% |
| 3699939 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.75 | 61.0 | 6.58e-01 | 94.7% | 97.4% |
| 4460590 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.75 | 60.0 | 6.37e-01 | 95.1% | 93.0% |
| 4941072 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.75 | 68.0 | 6.94e-01 | 95.6% | 96.4% |
| 4997796 | 2006.1.6.45 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 | 0.74 | 64.0 | 5.78e-01 | 94.7% | 68.9% |
| 3904589 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.74 | 60.0 | 6.05e-01 | 94.7% | 83.1% |
| 3531376 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.74 | 60.0 | 6.33e-01 | 93.8% | 92.6% |
| 4998535 | 2006.1.6.45 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 | 0.74 | 64.0 | 6.69e-01 | 94.2% | 96.2% |
| 3617647 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.74 | 58.0 | 6.35e-01 | 94.7% | 97.3% |
| 3215790 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.73 | 62.0 | 6.28e-01 | 95.1% | 88.0% |
| 3226298 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.73 | 61.0 | 6.19e-01 | 95.1% | 88.6% |
| 3625692 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.72 | 62.0 | 6.42e-01 | 95.6% | 93.5% |
| 3793699 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.72 | 59.0 | 6.17e-01 | 94.7% | 90.5% |
| 3254720 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.72 | 62.0 | 6.39e-01 | 95.1% | 94.0% |
| 3627625 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.71 | 64.0 | 6.24e-01 | 94.2% | 93.9% |
| 3220827 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.70 | 58.0 | 6.23e-01 | 94.7% | 98.5% |
| 3935808 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.70 | 56.0 | 6.13e-01 | 92.0% | 98.4% |
| 4025297 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.70 | 60.0 | 6.11e-01 | 95.1% | 91.4% |
| 4194688 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.69 | 33.0 | 4.52e-01 | 94.2% | 88.7% |
| 4861515 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.68 | 61.0 | 6.04e-01 | 94.2% | 89.9% |
| 3936701 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.67 | 55.0 | 5.83e-01 | 92.9% | 96.5% |
| 4015523 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.66 | 33.0 | 3.88e-01 | 95.1% | 65.0% |
| 4868768 | 2006.1.6.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Med25_VWA | 0.66 | 54.0 | 5.84e-01 | 93.3% | 100.0% |
| 3214870 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.65 | 56.0 | 5.93e-01 | 92.4% | 100.0% |
| 4953860 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.54 | 33.0 | 3.85e-01 | 95.1% | 85.2% |
| 5041780 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.54 | 33.0 | 4.04e-01 | 94.2% | 95.0% |
| 5066421 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.53 | 33.0 | 3.79e-01 | 94.7% | 83.7% |
| 3248825 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.52 | 39.0 | 4.11e-01 | 95.1% | 84.4% |
| 3895050 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.52 | 33.0 | 3.74e-01 | 95.1% | 81.8% |
| 3918045 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.51 | 41.0 | 2.88e-01 | 95.6% | 26.7% |
| 3802315 | 2003.1.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N | 0.50 | 32.0 | 3.40e-01 | 89.3% | 68.3% |
D2
medium
residues 72-139
Domain cluster:
representative
D3
medium
residues 465-522_551-569
Domain cluster:
representative
D4
medium
residues 906-1017
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05567.18 best | T4P_PilY1 | 39.2 | 5.80e-10 | 96.4% | 22.1% |
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ijcA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.86 | 65.0 | 4.44e-01 | 100.0% | 24.6% |
| 2ymsA00 | 2.40.128.630 | Mainly Beta › Beta Barrel › Lipocalin › | 0.82 | 57.0 | 5.51e-01 | 100.0% | 64.5% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.75 | 57.0 | 4.02e-01 | 100.0% | 26.5% |
| 4zovB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.75 | 62.0 | 4.21e-01 | 100.0% | 26.3% |
| 3g4eA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.73 | 55.0 | 3.99e-01 | 100.0% | 29.6% |
| 5ov3B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.73 | 59.0 | 4.26e-01 | 100.0% | 31.7% |
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 38.0 | 4.77e-01 | 100.0% | 86.2% |
| 1pbyB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.71 | 56.0 | 3.94e-01 | 100.0% | 27.9% |
| 1h4iA00 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.70 | 65.0 | 4.02e-01 | 100.0% | 25.0% |
| 5flwA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.70 | 61.0 | 4.43e-01 | 100.0% | 35.1% |
| 2qe8A00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.69 | 59.0 | 4.13e-01 | 100.0% | 30.3% |
| 1eurA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.68 | 62.0 | 4.32e-01 | 100.0% | 36.3% |
| 1flgA00 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.68 | 62.0 | 3.90e-01 | 100.0% | 27.8% |
| 4ffgA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.68 | 61.0 | 4.38e-01 | 100.0% | 41.7% |
| 1l0qA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 59.0 | 4.22e-01 | 100.0% | 34.6% |
| 6igbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 62.0 | 4.27e-01 | 100.0% | 38.0% |
| 7b9cA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 61.0 | 4.21e-01 | 100.0% | 48.9% |
| 3vsfC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.67 | 60.0 | 4.27e-01 | 100.0% | 34.8% |
| 1pguA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 59.0 | 4.33e-01 | 100.0% | 38.4% |
| 5hqgA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 60.0 | 4.18e-01 | 98.2% | 37.3% |
| 1k8kC00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 59.0 | 4.10e-01 | 99.1% | 32.2% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 33.0 | 4.27e-01 | 84.8% | 91.5% |
| 4gq1A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 58.0 | 4.08e-01 | 100.0% | 38.6% |
| 3mmyA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 55.0 | 3.84e-01 | 100.0% | 30.8% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 30.0 | 3.89e-01 | 81.2% | 88.1% |
| 3a58A01 | 2.30.29.90 | Mainly Beta › Roll › PH-domain like › | 0.60 | 50.0 | 4.30e-01 | 89.3% | 78.2% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 28.0 | 3.58e-01 | 85.7% | 80.0% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.58 | 43.0 | 4.30e-01 | 76.8% | 98.2% |
| 1qqgA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 43.0 | 4.46e-01 | 76.8% | 100.0% |
| 3loyA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 41.0 | 4.31e-01 | 82.1% | 83.2% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.56 | 46.0 | 4.48e-01 | 88.4% | 94.4% |
| 2kigA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.56 | 45.0 | 4.01e-01 | 87.5% | 77.6% |
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.55 | 38.0 | 4.38e-01 | 96.4% | 98.8% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 27.0 | 3.25e-01 | 88.4% | 69.7% |
| 3ugfB02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.53 | 43.0 | 3.73e-01 | 94.6% | 55.4% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.53 | 32.0 | 3.35e-01 | 79.5% | 65.3% |
| 2gtlM02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 39.0 | 3.47e-01 | 80.4% | 59.0% |
| 1q57G01 | 2.20.25.180 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.52 | 30.0 | 3.62e-01 | 87.5% | 87.7% |
| 3apaA00 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.50 | 40.0 | 3.75e-01 | 85.7% | 92.0% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4375914 | 5.1.4.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › T4P_PilY1 | 0.94 | 91.0 | 5.38e-01 | 100.0% | 19.2% |
| 3967064 | 5.1.5.140 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › T4P_PilY1 | 0.94 | 91.0 | 5.40e-01 | 100.0% | 19.8% |
| 4112562 | 5.1.4.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › T4P_PilY1 | 0.94 | 84.0 | 5.10e-01 | 100.0% | 18.1% |
| 3601135 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.84 | 59.0 | 4.04e-01 | 100.0% | 23.5% |
| 3499683 | 5.1.5.54 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NOL10_N | 0.83 | 60.0 | 4.09e-01 | 100.0% | 22.7% |
| 4272206 | 558.1.1.26 ↗ | alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain › WD40 | 0.80 | 62.0 | 4.05e-01 | 100.0% | 21.0% |
| 3713034 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.80 | 61.0 | 4.01e-01 | 93.8% | 21.7% |
| 3741200 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.80 | 63.0 | 4.03e-01 | 94.6% | 19.4% |
| 3831607 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.80 | 64.0 | 4.51e-01 | 100.0% | 29.8% |
| 4029702 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.79 | 60.0 | 4.08e-01 | 100.0% | 24.1% |
| 4018183 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.77 | 63.0 | 4.46e-01 | 100.0% | 29.8% |
| 3351338 | 5.1.4.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 | 0.77 | 68.0 | 4.45e-01 | 100.0% | 23.9% |
| 3592074 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.77 | 58.0 | 3.36e-01 | 100.0% | 10.1% |
| 3605676 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.76 | 57.0 | 3.87e-01 | 93.8% | 23.2% |
| 4957585 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.76 | 63.0 | 4.42e-01 | 100.0% | 29.6% |
| 3376278 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.76 | 61.0 | 4.31e-01 | 100.0% | 29.7% |
| 5040571 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.75 | 64.0 | 4.16e-01 | 100.0% | 22.4% |
| 3391128 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.74 | 62.0 | 4.05e-01 | 100.0% | 23.3% |
| 4025057 | 5.1.4.284 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, EIF3I | 0.74 | 64.0 | 4.44e-01 | 98.2% | 31.4% |
| None | — | 0.73 | 59.0 | 3.97e-01 | 100.0% | 23.4% | |
| 3403740 | 5.1.3.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP | 0.73 | 63.0 | 4.32e-01 | 100.0% | 28.6% |
| 3735485 | 5.1.4.143 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF6454 | 0.72 | 56.0 | 3.93e-01 | 100.0% | 27.7% |
| 3223067 | 5.1.4.312 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_WDHD1_1st | 0.72 | 55.0 | 3.91e-01 | 100.0% | 27.7% |
| 4861416 | 5.1.1.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › WD40 | 0.72 | 59.0 | 4.07e-01 | 100.0% | 26.9% |
| 4890224 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.72 | 59.0 | 3.73e-01 | 100.0% | 18.5% |
| 3791149 | 5.1.3.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 | 0.72 | 61.0 | 4.18e-01 | 100.0% | 28.1% |
| 3781119 | 5.1.4.97 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop | 0.72 | 57.0 | 3.80e-01 | 100.0% | 21.8% |
| 3385264 | 5.1.4.31 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C | 0.71 | 67.0 | 4.34e-01 | 100.0% | 28.4% |
| 3416404 | 5.1.4.240 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MRJP | 0.71 | 62.0 | 4.31e-01 | 100.0% | 29.4% |
| 1310956 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.71 | 57.0 | 4.00e-01 | 100.0% | 28.0% |
| 3832420 | 5.1.4.414 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Lgl_C | 0.71 | 66.0 | 4.31e-01 | 100.0% | 27.3% |
| 3194696 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.70 | 60.0 | 3.99e-01 | 92.9% | 33.6% |
| 3790584 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.70 | 60.0 | 4.22e-01 | 94.6% | 30.1% |
| 4944242 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.70 | 64.0 | 4.16e-01 | 100.0% | 31.1% |
| 3709162 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 57.0 | 4.06e-01 | 100.0% | 30.0% |
| 3965906 | 5.1.5.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ | 0.69 | 64.0 | 3.97e-01 | 100.0% | 26.8% |
| 3316283 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 61.0 | 4.00e-01 | 94.6% | 34.4% |
| 3461166 | 5.1.4.414 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Lgl_C | 0.69 | 64.0 | 4.27e-01 | 100.0% | 32.8% |
| 3995515 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.67 | 62.0 | 4.44e-01 | 100.0% | 39.9% |
| 1227254 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.67 | 60.0 | 4.34e-01 | 100.0% | 37.1% |
| 3263889 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 61.0 | 3.96e-01 | 100.0% | 31.5% |
| 4504291 | 375.1.1.29 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › SoxD | 0.66 | 33.0 | 4.32e-01 | 87.5% | 88.3% |
| 3580087 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.66 | 60.0 | 3.93e-01 | 100.0% | 35.4% |
| 3478410 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.65 | 59.0 | 4.12e-01 | 97.3% | 35.0% |
| 3722465 | 5.1.5.54 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NOL10_N | 0.65 | 60.0 | 4.05e-01 | 100.0% | 33.0% |
| 3775858 | 5.1.4.547 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF4800, NBCH_WD40 | 0.65 | 61.0 | 4.05e-01 | 100.0% | 35.0% |
| 3530256 | 5.1.4.297 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 | 0.65 | 61.0 | 4.10e-01 | 100.0% | 36.8% |
| 3716765 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.65 | 61.0 | 3.75e-01 | 100.0% | 83.3% |
| 3242109 | 5.1.4.172 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CAF1B_HIR1 | 0.64 | 57.0 | 3.55e-01 | 96.4% | 18.7% |
| 3315951 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.64 | 41.0 | 4.72e-01 | 88.4% | 91.1% |
| 4022963 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 57.0 | 3.80e-01 | 100.0% | 36.9% |
| 3169468 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 57.0 | 3.83e-01 | 100.0% | 29.1% |
| 3199490 | 5.1.4.369 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N | 0.63 | 58.0 | 3.42e-01 | 100.0% | 19.2% |
| 4401572 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.63 | 42.0 | 4.77e-01 | 88.4% | 90.6% |
| 5026087 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.62 | 56.0 | 3.79e-01 | 100.0% | 33.6% |
| 4927809 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.62 | 58.0 | 4.00e-01 | 100.0% | 33.6% |
| 3276019 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.61 | 56.0 | 3.66e-01 | 100.0% | 29.5% |
| 4606362 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 41.0 | 4.60e-01 | 87.5% | 89.4% |
| 3649973 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.61 | 55.0 | 3.81e-01 | 100.0% | 41.1% |
| 3638345 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 55.0 | 3.73e-01 | 100.0% | 31.4% |
| 5022396 | 3459.1.1.0 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule | 0.60 | 39.0 | 4.51e-01 | 89.3% | 91.3% |
| 3766659 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.60 | 29.0 | 3.82e-01 | 82.1% | 85.0% |
| 3786518 | 4.8.1.18 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Myosin_N | 0.60 | 34.0 | 4.23e-01 | 75.0% | 95.4% |
| 3706445 | 5.1.3.27 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_4 | 0.59 | 54.0 | 3.74e-01 | 100.0% | 35.4% |
| 3929330 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.59 | 49.0 | 4.63e-01 | 86.6% | 94.6% |
| 3782414 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.58 | 41.0 | 4.35e-01 | 88.4% | 83.0% |
| 3263467 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.55 | 34.0 | 3.92e-01 | 100.0% | 86.3% |
| 3471318 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 41.0 | 4.28e-01 | 77.7% | 97.0% |
| 3647116 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.55 | 40.0 | 3.90e-01 | 76.8% | 89.6% |
| 3713334 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.54 | 29.0 | 3.69e-01 | 73.2% | 95.0% |
| 3519122 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.51 | 33.0 | 3.57e-01 | 82.1% | 81.1% |
D5
medium
residues 1018-1095_1118-1143
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05567.18 best | T4P_PilY1 | 33.9 | 2.40e-08 | 86.5% | 16.3% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3sreA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.65 | 46.0 | 3.22e-01 | 100.0% | 23.1% |
| 6n8pA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 47.0 | 3.21e-01 | 100.0% | 22.0% |
| 4nzrM02 | 2.160.20.180 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.54 | 38.0 | 3.17e-01 | 72.1% | 53.3% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 38.0 | 4.03e-01 | 73.1% | 85.6% |
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 43.0 | 3.97e-01 | 86.5% | 96.2% |
| 3fyfA00 | 2.40.128.410 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 44.0 | 3.90e-01 | 89.4% | 75.2% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.53 | 44.0 | 4.18e-01 | 90.4% | 89.4% |
| 3q90B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 43.0 | 4.03e-01 | 90.4% | 91.5% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 36.0 | 3.72e-01 | 73.1% | 84.3% |
| 3en2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 36.0 | 3.86e-01 | 73.1% | 87.9% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 37.0 | 3.62e-01 | 74.0% | 78.4% |
| 1z9fA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 35.0 | 3.75e-01 | 72.1% | 82.0% |
| 1ar0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 43.0 | 4.08e-01 | 92.3% | 94.4% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 36.0 | 3.57e-01 | 75.0% | 77.2% |
| 3u4vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 36.0 | 3.54e-01 | 75.0% | 74.1% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 36.0 | 3.58e-01 | 74.0% | 80.0% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 36.0 | 3.67e-01 | 73.1% | 84.8% |
| 3vsfC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 42.0 | 3.03e-01 | 100.0% | 28.9% |
| 3f2bA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 37.0 | 3.87e-01 | 76.9% | 88.5% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4375914 | 5.1.4.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › T4P_PilY1 | 0.92 | 88.0 | 5.20e-01 | 100.0% | 22.0% |
| 3967064 | 5.1.5.140 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › T4P_PilY1 | 0.92 | 88.0 | 5.20e-01 | 100.0% | 22.7% |
| 3322985 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.65 | 48.0 | 3.16e-01 | 99.0% | 18.8% |
| 3305439 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.61 | 43.0 | 3.03e-01 | 100.0% | 22.3% |
| 3926892 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 37.0 | 2.71e-01 | 89.4% | 22.0% |
| 3443938 | 7579.1.1.69 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › ABHD18 | 0.58 | 44.0 | 3.10e-01 | 81.7% | 35.3% |
| 3636081 | 4972.1.1.1 ↗ | beta barrels › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › DUF917_C | 0.57 | 39.0 | 3.47e-01 | 70.2% | 85.6% |
| 3540487 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.55 | 34.0 | 3.52e-01 | 93.3% | 66.3% |
| 3599659 | 206.1.3.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DUF7920 | 0.53 | 43.0 | 2.99e-01 | 92.3% | 73.0% |
| 4170378 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.53 | 37.0 | 3.59e-01 | 72.1% | 80.0% |
| 3448049 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.53 | 38.0 | 3.80e-01 | 74.0% | 82.9% |
| 3856046 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.53 | 33.0 | 3.15e-01 | 85.6% | 50.8% |
| 4026020 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 42.0 | 2.88e-01 | 100.0% | 23.7% |
| 3227990 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 47.0 | 3.01e-01 | 100.0% | 33.0% |
| 3375524 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.52 | 36.0 | 3.51e-01 | 73.1% | 71.7% |
| 4122961 | 2.1.1.122 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 | 0.51 | 36.0 | 3.71e-01 | 73.1% | 88.0% |
| 4680392 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.51 | 37.0 | 3.64e-01 | 74.0% | 80.9% |
| 3839607 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.51 | 36.0 | 3.52e-01 | 74.0% | 79.7% |
| 4238204 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.51 | 37.0 | 3.72e-01 | 76.0% | 76.2% |
| 3653384 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.51 | 41.0 | 3.57e-01 | 86.5% | 68.4% |
| 4232994 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.51 | 36.0 | 3.61e-01 | 74.0% | 80.9% |
| 4478491 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.51 | 37.0 | 3.70e-01 | 76.0% | 87.6% |
| 4124695 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 33.0 | 3.50e-01 | 86.5% | 76.7% |
D6
medium
residues 1096-1117_1144-1220
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l2nA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 34.0 | 3.98e-01 | 77.8% | 78.9% |
| 2g2sA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.60 | 29.0 | 3.50e-01 | 70.7% | 68.8% |
| 1yqzA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.60 | 37.0 | 3.58e-01 | 86.9% | 55.6% |
| 2cduA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.59 | 36.0 | 3.47e-01 | 86.9% | 54.0% |
| 3cgbA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.58 | 36.0 | 3.49e-01 | 85.9% | 55.5% |
| 1nhpA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.57 | 35.0 | 3.40e-01 | 85.9% | 54.0% |
| 3oc4B03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.57 | 37.0 | 3.50e-01 | 89.9% | 54.5% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 31.0 | 3.72e-01 | 74.7% | 89.3% |
| 6gp1A00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.56 | 28.0 | 3.27e-01 | 70.7% | 66.2% |
| 1lyvA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 42.0 | 3.12e-01 | 82.8% | 77.7% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.52 | 45.0 | 3.80e-01 | 97.0% | 68.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3484671 | 3433.1.1.0 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Plasmid-encoded ParB dimerization domain | 0.65 | 32.0 | 4.18e-01 | 72.7% | 90.0% |
| 3271674 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.64 | 41.0 | 4.32e-01 | 77.8% | 72.2% |
| 5029482 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.63 | 34.0 | 3.81e-01 | 71.7% | 66.3% |
| 3301984 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 34.0 | 4.34e-01 | 73.7% | 96.4% |
| 2490256 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.56 | 28.0 | 3.26e-01 | 70.7% | 65.2% |
| 5035204 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.56 | 42.0 | 3.51e-01 | 77.8% | 68.6% |
| 4038135 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.55 | 41.0 | 3.15e-01 | 81.8% | 86.0% |
| 3219195 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 38.0 | 3.74e-01 | 71.7% | 100.0% |
| 4416182 | 241.15.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 | 0.53 | 36.0 | 3.57e-01 | 77.8% | 65.7% |
| 4453085 | 7579.1.1.137 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › FrsA-like, Abhydrolase_6 | 0.53 | 38.0 | 2.49e-01 | 73.7% | 22.7% |
| 3772852 | 11.1.1.239 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG3 | 0.53 | 38.0 | 3.57e-01 | 74.7% | 93.3% |
| 5055269 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 39.0 | 3.56e-01 | 77.8% | 73.1% |
| 4984586 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.52 | 41.0 | 4.01e-01 | 85.9% | 75.5% |
| 3421524 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 39.0 | 2.57e-01 | 78.8% | 41.2% |
| 3781686 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.51 | 40.0 | 2.90e-01 | 87.9% | 80.2% |
| 3939766 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.51 | 38.0 | 2.75e-01 | 81.8% | 68.9% |
| 3970330 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.50 | 44.0 | 3.98e-01 | 97.0% | 70.4% |