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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00235
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00235
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-101
Domain cluster:
rep: MW291021.1__QPL14492.1__SEA_EHYELIMAYOE_177__00175__D3-97
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24732.3 best | ParE_like | 29.8 | 6.70e-07 | 68.0% | 98.5% |
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kheA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.84 | 69.0 | 7.28e-01 | 86.0% | 96.6% |
| 3bpqD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.84 | 69.0 | 7.38e-01 | 90.0% | 100.0% |
| 4ml0B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.82 | 66.0 | 6.91e-01 | 84.0% | 98.9% |
| 3g5oC00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.82 | 62.0 | 6.62e-01 | 80.0% | 90.8% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.78 | 62.0 | 6.55e-01 | 83.0% | 96.6% |
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.77 | 60.0 | 6.22e-01 | 84.0% | 87.4% |
| 6n90A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.77 | 59.0 | 6.28e-01 | 82.0% | 100.0% |
| 2otrA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.76 | 59.0 | 6.19e-01 | 82.0% | 96.7% |
| 5cw7B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.75 | 60.0 | 6.20e-01 | 85.0% | 94.7% |
| 7bwfA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.74 | 59.0 | 6.26e-01 | 84.0% | 97.7% |
| 4mcxF00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.74 | 55.0 | 5.80e-01 | 79.0% | 100.0% |
| 5hy7B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 41.0 | 2.73e-01 | 73.0% | 29.1% |
| 2b5lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 40.0 | 2.70e-01 | 71.0% | 40.6% |
| 3u4yA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 40.0 | 2.80e-01 | 71.0% | 32.6% |
| 3zqsA02 | 3.10.110.20 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › RWD domain-like | 0.57 | 33.0 | 3.42e-01 | 79.0% | 59.2% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 41.0 | 2.79e-01 | 75.0% | 30.6% |
| 4i79A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 39.0 | 2.72e-01 | 71.0% | 31.3% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 41.0 | 3.32e-01 | 78.0% | 90.4% |
| 7b9cA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 41.0 | 2.75e-01 | 76.0% | 27.7% |
| 2i0rA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 39.0 | 2.71e-01 | 73.0% | 32.0% |
| 2pm6D01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 39.0 | 2.84e-01 | 73.0% | 40.0% |
| 1k8kC00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 39.0 | 2.70e-01 | 73.0% | 38.1% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 41.0 | 2.87e-01 | 78.0% | 41.2% |
| 4zovB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 40.0 | 2.75e-01 | 76.0% | 28.7% |
| 3fgbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 41.0 | 2.78e-01 | 76.0% | 31.5% |
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 39.0 | 2.75e-01 | 74.0% | 34.8% |
| 3sreA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 45.0 | 3.08e-01 | 87.0% | 34.0% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.54 | 38.0 | 3.23e-01 | 72.0% | 77.1% |
| 2pm9A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 38.0 | 2.66e-01 | 73.0% | 32.4% |
| 4hz9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 3.89e-01 | 84.0% | 73.2% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.52 | 44.0 | 4.06e-01 | 92.0% | 75.8% |
| 8adbA01 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.52 | 44.0 | 3.46e-01 | 90.0% | 87.4% |
| 1e8uA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.52 | 44.0 | 2.97e-01 | 97.0% | 34.1% |
| 3i2nA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 41.0 | 2.81e-01 | 84.0% | 100.0% |
| 5z5dA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 36.0 | 2.94e-01 | 74.0% | 41.7% |
| 4yy8A02 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.51 | 36.0 | 2.61e-01 | 73.0% | 36.6% |
| 6x05A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.87e-01 | 91.0% | 30.5% |
| 4j0xA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 39.0 | 2.66e-01 | 82.0% | 96.4% |
| 6n8pA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.88e-01 | 100.0% | 24.7% |
| 3kh8A02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 35.0 | 3.18e-01 | 72.0% | 95.5% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5014147 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.89 | 69.0 | 7.73e-01 | 81.0% | 100.0% |
| 5014619 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.88 | 65.0 | 7.24e-01 | 80.0% | 96.2% |
| 5029202 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.88 | 68.0 | 7.37e-01 | 86.0% | 95.3% |
| 4966674 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.88 | 70.0 | 7.56e-01 | 86.0% | 97.6% |
| 5030204 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.87 | 61.0 | 6.99e-01 | 77.0% | 96.0% |
| 5071213 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.87 | 64.0 | 7.16e-01 | 79.0% | 96.2% |
| 4968316 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.87 | 67.0 | 7.11e-01 | 80.0% | 90.9% |
| 4950220 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.86 | 70.0 | 7.36e-01 | 85.0% | 96.7% |
| 4984297 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.86 | 68.0 | 7.17e-01 | 83.0% | 91.1% |
| 4887373 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.85 | 64.0 | 7.13e-01 | 78.0% | 97.5% |
| 4994192 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.85 | 63.0 | 6.99e-01 | 79.0% | 96.2% |
| 5080208 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.85 | 69.0 | 7.25e-01 | 85.0% | 95.6% |
| 5032565 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.85 | 66.0 | 7.11e-01 | 81.0% | 95.3% |
| 5027871 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.84 | 68.0 | 7.04e-01 | 85.0% | 96.8% |
| 4967379 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.83 | 65.0 | 7.01e-01 | 81.0% | 96.5% |
| 4616795 | 4312.1.1.7 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB_toxin | 0.83 | 72.0 | 7.22e-01 | 91.0% | 99.0% |
| 5005256 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.83 | 65.0 | 7.06e-01 | 83.0% | 96.5% |
| 4966983 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.83 | 62.0 | 6.89e-01 | 78.0% | 97.5% |
| 1297412 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.83 | 66.0 | 6.93e-01 | 84.0% | 97.8% |
| 4937019 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.83 | 67.0 | 7.05e-01 | 85.0% | 100.0% |
| 4948982 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.83 | 66.0 | 6.93e-01 | 84.0% | 96.7% |
| 4937462 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.82 | 67.0 | 6.92e-01 | 86.0% | 96.8% |
| 5016951 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.81 | 70.0 | 7.23e-01 | 92.0% | 98.9% |
| 2807914 | 4312.1.1.6 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin | 0.81 | 63.0 | 6.63e-01 | 81.0% | 93.3% |
| 4962176 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.81 | 61.0 | 6.79e-01 | 79.0% | 98.8% |
| 5018720 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.81 | 63.0 | 6.77e-01 | 82.0% | 96.5% |
| 2706250 | 4312.1.1.7 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB_toxin | 0.80 | 70.0 | 6.89e-01 | 93.0% | 96.2% |
| 3586933 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.80 | 61.0 | 6.26e-01 | 80.0% | 100.0% |
| 3165472 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.80 | 59.0 | 6.12e-01 | 78.0% | 93.7% |
| 4937737 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.80 | 61.0 | 6.54e-01 | 80.0% | 97.6% |
| 5062498 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.79 | 62.0 | 6.69e-01 | 86.0% | 97.6% |
| 3945861 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.78 | 65.0 | 6.87e-01 | 88.0% | 98.9% |
| 4937366 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.78 | 69.0 | 7.10e-01 | 100.0% | 98.9% |
| 4927100 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.78 | 60.0 | 6.25e-01 | 80.0% | 96.7% |
| 3604507 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.78 | 66.0 | 6.85e-01 | 96.0% | 97.9% |
| 3948814 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.76 | 70.0 | 6.95e-01 | 100.0% | 94.3% |
| 166546 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.76 | 59.0 | 6.19e-01 | 82.0% | 96.7% |
| 5028295 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.74 | 63.0 | 6.51e-01 | 100.0% | 96.8% |
| 4993641 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.73 | 51.0 | 5.74e-01 | 80.0% | 96.0% |
| 5030390 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.70 | 50.0 | 5.24e-01 | 80.0% | 82.0% |
| 3936023 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 42.0 | 2.94e-01 | 71.0% | 24.8% |
| 3627380 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 42.0 | 2.89e-01 | 72.0% | 34.2% |
| 4626431 | 109.21.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 | 0.57 | 40.0 | 2.40e-01 | 73.0% | 14.5% |
| 3788355 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 39.0 | 2.60e-01 | 72.0% | 38.6% |
| 3930546 | 5.1.4.90 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Itfg2 | 0.56 | 40.0 | 2.72e-01 | 75.0% | 30.4% |
| 3185751 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.55 | 40.0 | 2.70e-01 | 76.0% | 29.4% |
| 4028495 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 40.0 | 2.81e-01 | 76.0% | 33.4% |
| 3415375 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.55 | 38.0 | 2.66e-01 | 72.0% | 29.1% |
| 3699565 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 40.0 | 2.66e-01 | 77.0% | 43.6% |
| 4029773 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 43.0 | 2.88e-01 | 84.0% | 59.2% |
| 3388897 | 5.1.4.407 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, Alsin_RLD | 0.54 | 44.0 | 3.00e-01 | 100.0% | 23.4% |
| 3601043 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 39.0 | 2.56e-01 | 77.0% | 21.9% |
| 3562858 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 38.0 | 2.49e-01 | 73.0% | 22.7% |
| 3939595 | 5.1.5.88 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nucleoporin_N | 0.54 | 45.0 | 2.85e-01 | 92.0% | 81.5% |
| 4021315 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 38.0 | 2.71e-01 | 75.0% | 33.1% |
| 3517695 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.53 | 44.0 | 2.86e-01 | 90.0% | 28.6% |
| 3993098 | 5.1.5.52 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › EMC1_C | 0.52 | 44.0 | 2.77e-01 | 95.0% | 28.7% |
| 3935890 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 41.0 | 2.85e-01 | 89.0% | 25.8% |
| 3453961 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 42.0 | 2.83e-01 | 87.0% | 92.6% |
| 2885136 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.50 | 44.0 | 2.84e-01 | 100.0% | 85.9% |