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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00275
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00275
Identity
- Kingdom:
- phage
Quality
77.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 46-172
Domain cluster:
rep: KX077896.1__ANM47700.1__X__00069__D72-191
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01131.26 best | Topoisom_bac | 59.9 | 3.30e-16 | 100.0% | 30.6% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1i7dA04 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.95 | 90.0 | 9.08e-01 | 99.2% | 98.4% |
| 4cgyA04 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.86 | 79.0 | 8.02e-01 | 100.0% | 98.4% |
| 6k8nA02 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.84 | 75.0 | 7.80e-01 | 96.1% | 100.0% |
| 1cy9A01 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.79 | 69.0 | 7.17e-01 | 100.0% | 98.3% |
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 29.0 | 4.86e-01 | 93.7% | 95.7% |
| 1gkuB08 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.76 | 68.0 | 7.05e-01 | 98.4% | 100.0% |
| 2g9wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 31.0 | 4.25e-01 | 78.0% | 73.1% |
| 2mh2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 31.0 | 4.37e-01 | 78.0% | 81.2% |
| 1a22A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 47.0 | 4.22e-01 | 100.0% | 82.8% |
| 3s3uB00 | 3.60.70.12 | Alpha Beta › 4-Layer Sandwich › L-amino peptidase D-ALA esterase/amidase › L-amino peptidase D-ALA esterase/amidase | 0.50 | 40.0 | 2.99e-01 | 87.4% | 94.8% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4319228 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.94 | 92.0 | 9.11e-01 | 100.0% | 97.7% |
| 4602152 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.94 | 90.0 | 9.00e-01 | 99.2% | 99.2% |
| 4466579 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.92 | 89.0 | 8.85e-01 | 100.0% | 98.5% |
| 3590144 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.92 | 89.0 | 8.85e-01 | 100.0% | 98.5% |
| 3590582 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.90 | 86.0 | 8.53e-01 | 100.0% | 98.5% |
| 4943299 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.88 | 83.0 | 8.37e-01 | 100.0% | 99.2% |
| 4987355 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.88 | 82.0 | 8.28e-01 | 100.0% | 98.4% |
| 3305633 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.88 | 81.0 | 8.19e-01 | 99.2% | 97.6% |
| 4960284 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.87 | 80.0 | 8.14e-01 | 100.0% | 98.4% |
| 4933036 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.85 | 78.0 | 7.87e-01 | 100.0% | 96.8% |
| 4981102 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 78.0 | 7.93e-01 | 100.0% | 97.6% |
| 4971255 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 80.0 | 8.13e-01 | 98.4% | 100.0% |
| 5005179 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.85 | 78.0 | 7.88e-01 | 100.0% | 98.4% |
| 4363124 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.84 | 81.0 | 7.89e-01 | 100.0% | 94.8% |
| 5021952 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.84 | 80.0 | 7.86e-01 | 100.0% | 94.8% |
| 3176697 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.84 | 80.0 | 7.60e-01 | 100.0% | 97.2% |
| 5051951 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.84 | 80.0 | 7.92e-01 | 100.0% | 97.7% |
| 5000123 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.84 | 79.0 | 7.73e-01 | 99.2% | 98.5% |
| 4976526 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 77.0 | 7.72e-01 | 97.6% | 100.0% |
| 3594756 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 79.0 | 7.84e-01 | 100.0% | 97.7% |
| 3756243 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.82 | 73.0 | 7.56e-01 | 98.4% | 100.0% |
| 5078217 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.82 | 55.0 | 6.32e-01 | 94.5% | 91.6% |
| 4976716 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 44.0 | 5.91e-01 | 100.0% | 98.6% |
| 3612398 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.78 | 69.0 | 7.10e-01 | 100.0% | 97.5% |
| 5001225 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 72.0 | 7.05e-01 | 100.0% | 97.0% |
| 4006756 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.76 | 70.0 | 5.12e-01 | 100.0% | 40.3% |
| 4073954 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.76 | 71.0 | 7.01e-01 | 100.0% | 96.3% |
| 5008811 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.75 | 70.0 | 7.03e-01 | 100.0% | 97.7% |
| 3368826 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.74 | 70.0 | 6.72e-01 | 100.0% | 95.7% |
| 4335818 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.74 | 69.0 | 6.71e-01 | 100.0% | 96.4% |
| 3593806 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 69.0 | 6.68e-01 | 100.0% | 95.7% |
| 3310977 | 101.1.2.12 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEP | 0.63 | 34.0 | 4.67e-01 | 96.9% | 98.6% |
| 3791538 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.62 | 30.0 | 3.19e-01 | 89.8% | 50.9% |
| 3668847 | 101.1.2.12 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEP | 0.56 | 38.0 | 4.11e-01 | 84.3% | 80.9% |
| 3600881 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 38.0 | 2.28e-01 | 79.5% | 12.5% |