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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00287

Bact-Vir

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00287

Identity

Kingdom:
phage

Quality

82.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-220
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tviA00 3.40.390.30 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" 0.68 47.0 5.44e-01 99.0% 96.7%
7y7oA01 3.40.390.30 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" 0.68 46.0 5.48e-01 97.6% 99.3%
3nqxA01 3.10.170.10 Alpha Beta › Roll › Elastase; domain 1 › 0.62 36.0 4.18e-01 79.2% 77.1%
3g5cA01 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.51 41.0 4.13e-01 89.9% 84.5%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4261757 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.76 51.0 4.78e-01 93.2% 55.6%
4949375 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.72 50.0 3.93e-01 91.8% 35.8%
4929397 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.70 38.0 4.70e-01 83.1% 83.1%
4532886 2498.1.1.22 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.68 50.0 5.71e-01 98.1% 99.4%
4418037 2498.1.1.22 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.68 48.0 5.61e-01 93.2% 100.0%
3601795 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.68 47.0 5.55e-01 95.2% 100.0%
4174312 2498.1.1.22 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.67 50.0 5.68e-01 96.1% 99.4%
4094432 2498.1.1.22 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.64 50.0 5.28e-01 97.6% 89.2%
4075047 2498.1.1.22 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.62 47.0 5.21e-01 93.2% 97.6%
4481481 2498.1.1.22 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.61 49.0 5.36e-01 94.2% 99.4%
4937224 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.58 42.0 4.52e-01 81.6% 84.2%
3262827 2498.1.1.14 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 0.56 48.0 3.58e-01 90.8% 64.2%
3738296 2498.1.1.155 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › PF30956 0.55 49.0 4.05e-01 94.2% 91.4%
5057989 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.52 47.0 4.08e-01 98.1% 64.5%