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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00303

Bact-Vir

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00303

Identity

Kingdom:
phage

Quality

83.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 29-86
PDB
Domain cluster: representative
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4c23B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.68 43.0 2.81e-01 75.9% 15.8%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.66 47.0 3.02e-01 77.6% 16.4%
4n6tA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 54.0 4.86e-01 96.6% 65.8%
4u1eI00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 59.0 3.64e-01 100.0% 18.5%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.65 58.0 4.25e-01 100.0% 37.7%
3exmA01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.65 56.0 3.91e-01 98.3% 29.7%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 57.0 4.63e-01 100.0% 92.9%
4mjdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 53.0 4.33e-01 93.1% 47.8%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.64 53.0 4.38e-01 94.8% 50.5%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.64 44.0 3.75e-01 94.8% 42.2%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 51.0 4.71e-01 98.3% 68.4%
1ufhA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.63 54.0 4.03e-01 100.0% 62.6%
3my2A00 2.60.450.10 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › Lipopolysaccharide (LPS) transport protein A like domain 0.62 55.0 4.24e-01 98.3% 50.8%
1jovA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.62 48.0 3.13e-01 100.0% 18.2%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.62 51.0 4.40e-01 94.8% 56.1%
3tthB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.62 55.0 3.99e-01 100.0% 53.7%
1hq0A00 3.60.100.10 Alpha Beta › 4-Layer Sandwich › Cytotoxic necrotizing factor 1 (CNF1) › Cytotoxic necrotizing factor, Rho-activating domain 0.62 53.0 3.44e-01 100.0% 93.2%
5o46A00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 52.0 4.30e-01 100.0% 70.2%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 46.0 3.46e-01 98.3% 32.4%
3gmvX00 3.10.450.730 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › BLIP domain 0.61 52.0 3.86e-01 98.3% 48.7%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.61 51.0 3.92e-01 94.8% 41.7%
4hn7A00 2.40.50.650 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 52.0 4.66e-01 100.0% 85.9%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.60 53.0 3.26e-01 100.0% 20.7%
3bk5A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.60 52.0 3.47e-01 98.3% 26.8%
3uaqB02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.60 51.0 3.75e-01 98.3% 36.2%
6x05A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 51.0 3.17e-01 100.0% 17.0%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.59 46.0 4.01e-01 94.8% 55.1%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.59 52.0 3.40e-01 98.3% 73.7%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 53.0 4.27e-01 100.0% 87.3%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 48.0 3.97e-01 94.8% 48.2%
1lrzA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 49.0 3.77e-01 96.6% 54.5%
3fljA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 47.0 3.63e-01 94.8% 37.6%
3nwsA01 2.40.50.800 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 48.0 3.69e-01 93.1% 90.1%
2i00A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 50.0 3.71e-01 98.3% 50.9%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.58 46.0 3.86e-01 96.6% 50.0%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.57 42.0 3.21e-01 82.8% 65.6%
5h8yD02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.56 45.0 3.19e-01 93.1% 63.1%
4qakA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.56 49.0 3.53e-01 100.0% 94.7%
2jqjA01 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.56 45.0 3.59e-01 94.8% 67.7%
2iayA00 3.30.1820.10 Alpha Beta › 2-Layer Sandwich › Lp2179-like fold › Lp2179-like 0.56 49.0 3.91e-01 98.3% 95.6%
2l4vA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 47.0 3.67e-01 98.3% 43.0%
3lodA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 47.0 3.62e-01 100.0% 50.3%
4h89A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 49.0 3.53e-01 100.0% 53.6%
3dtdD00 2.60.40.1880 Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein 0.55 46.0 3.57e-01 98.3% 52.4%
3ll3B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 45.0 2.97e-01 91.4% 24.1%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.55 48.0 3.49e-01 98.3% 34.9%
3obaA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.52e-01 77.6% 67.4%
4o38A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 46.0 4.01e-01 100.0% 91.7%
2ft0A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 45.0 3.08e-01 96.6% 40.1%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.54 44.0 4.36e-01 96.6% 84.1%
1vhsA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 48.0 3.46e-01 100.0% 54.5%
1c8zA00 3.20.90.10 Alpha Beta › Alpha-Beta Barrel › Tubby Protein; Chain A › Tubby Protein; Chain A 0.54 43.0 2.91e-01 94.8% 47.5%
3gy9A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 47.0 3.53e-01 98.3% 56.1%
3dsbA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 45.0 3.86e-01 100.0% 88.1%
4ew6A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 43.0 3.01e-01 96.6% 27.0%
1vdxA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.54 47.0 3.32e-01 100.0% 95.7%
1iicA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 44.0 2.99e-01 96.6% 40.3%
1xe4A01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 42.0 3.15e-01 91.4% 48.2%
3i9sA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 45.0 3.37e-01 100.0% 55.9%
8a9nA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 44.0 3.55e-01 100.0% 65.6%
4jxqA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 46.0 3.24e-01 98.3% 48.9%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 35.0 2.93e-01 70.7% 38.1%
3mi6B03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 45.0 3.79e-01 100.0% 99.0%
1d5rA02 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 41.0 3.28e-01 91.4% 65.4%
2ltjA00 2.20.230.10 Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. 0.52 38.0 3.16e-01 79.3% 61.3%
2cy2A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 44.0 3.26e-01 100.0% 56.9%
2au3A02 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.52 41.0 3.31e-01 91.4% 78.0%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 43.0 3.20e-01 98.3% 35.6%
1mu5A01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 45.0 3.14e-01 100.0% 39.5%
1vkcA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 43.0 3.39e-01 100.0% 65.5%
3vwaA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 42.0 3.77e-01 96.6% 86.7%
3h6eB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 42.0 3.56e-01 91.4% 58.6%
4e0aA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 43.0 3.25e-01 100.0% 62.8%
3p2hA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 42.0 3.01e-01 96.6% 57.6%
3d8pB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 42.0 3.20e-01 100.0% 53.8%
8a7dC01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 41.0 2.91e-01 100.0% 49.1%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3672263 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 57.0 3.36e-01 100.0% 11.6%
3871207 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.70 55.0 3.27e-01 98.3% 11.6%
3837325 5.1.4.261 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, EIF3I 0.69 60.0 3.67e-01 100.0% 16.0%
3279362 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.68 57.0 4.19e-01 91.4% 37.3%
3544903 5.1.4.13 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP 0.68 59.0 3.58e-01 100.0% 15.4%
4990889 283.1.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.68 57.0 4.81e-01 93.1% 62.1%
3869953 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 60.0 3.62e-01 100.0% 15.1%
3883421 234.1.1.0 ↗ a+b two layers › Microbial ribonucleases-like › Microbial ribonucleases › Microbial ribonucleases 0.66 57.0 4.16e-01 98.3% 45.1%
3255634 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 54.0 3.29e-01 100.0% 13.1%
3939966 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.65 55.0 4.54e-01 96.6% 60.0%
3727703 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.65 54.0 3.89e-01 93.1% 34.1%
2321284 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 48.0 3.91e-01 98.3% 41.2%
4033455 2003.1.2.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase 0.64 46.0 3.38e-01 77.6% 53.3%
4039533 3321.1.1.1 ↗ a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › FAS_meander 0.64 56.0 4.10e-01 98.3% 64.4%
1346676 3347.1.1.1 ↗ beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › DUF3836 0.64 53.0 4.38e-01 94.8% 50.5%
3476001 331.4.1.1 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.64 48.0 4.12e-01 94.8% 50.5%
185414 3347.1.1.1 ↗ beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › DUF3836 0.64 52.0 3.91e-01 100.0% 37.7%
None — 0.64 56.0 4.12e-01 100.0% 62.6%
3606828 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.63 53.0 4.13e-01 94.8% 52.3%
2513086 213.1.1.36 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_17 0.62 53.0 3.82e-01 96.6% 53.2%
3590145 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.62 56.0 4.00e-01 100.0% 62.4%
1349783 3347.1.1.1 ↗ beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › DUF3836 0.62 51.0 4.40e-01 94.8% 56.1%
5066997 4295.1.1.1 ↗ beta barrels › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › ADC 0.62 54.0 3.54e-01 100.0% 36.7%
3743855 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 54.0 3.30e-01 100.0% 17.3%
3885751 331.4.1.1 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.61 47.0 4.04e-01 96.6% 51.6%
3932499 5.1.11.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.61 54.0 3.30e-01 100.0% 16.6%
3340517 5.1.3.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.61 53.0 3.36e-01 98.3% 18.7%
4238196 213.1.1.36 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_17 0.61 51.0 3.70e-01 96.6% 54.9%
3732505 241.15.1.3 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.61 47.0 3.78e-01 86.2% 52.5%
3955407 243.1.1.69 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF6459 0.61 50.0 4.11e-01 96.6% 48.3%
3972141 881.1.1.25 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF4946 0.60 53.0 3.86e-01 98.3% 36.1%
4395357 213.1.1.7 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FemAB 0.60 50.0 3.67e-01 96.6% 45.9%
3955931 213.1.1.21 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C 0.60 52.0 3.58e-01 100.0% 44.1%
3494084 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.60 47.0 3.92e-01 87.9% 48.5%
4070349 213.1.1.7 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FemAB 0.60 50.0 3.11e-01 96.6% 22.0%
4030034 109.4.1.1140 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PEP5_VPS11 0.59 47.0 2.79e-01 96.6% 10.3%
185765 5084.5.1.13 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DUF4595 0.59 52.0 3.40e-01 98.3% 73.7%
3866695 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.59 50.0 3.65e-01 98.3% 34.8%
4034202 213.1.1.7 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FemAB 0.59 48.0 3.63e-01 96.6% 48.8%
3493155 5087.3.1.2 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › MTP_lip_bd 0.58 51.0 3.23e-01 100.0% 74.5%
3514747 213.1.1.36 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_17 0.58 50.0 3.75e-01 98.3% 54.0%
3359481 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.58 49.0 3.82e-01 100.0% 99.3%
3595439 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.58 48.0 3.36e-01 96.6% 50.2%
4672365 213.1.1.21 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C 0.58 48.0 3.33e-01 100.0% 41.7%
3978060 4023.1.1.3 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DUF7146 0.57 49.0 4.10e-01 94.8% 58.0%
4962744 2.1.1.370 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF6663 0.57 43.0 2.95e-01 82.8% 78.5%
3588623 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.57 47.0 3.90e-01 96.6% 72.6%
4028705 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.57 45.0 3.63e-01 94.8% 43.3%
3984133 3735.1.1.12 ↗ beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell 0.56 49.0 2.69e-01 100.0% 27.8%
4014367 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.56 47.0 3.48e-01 100.0% 63.4%
3193401 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 47.0 3.47e-01 100.0% 61.7%
3281516 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 48.0 3.57e-01 100.0% 50.6%
5047099 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 48.0 3.34e-01 100.0% 54.0%
3925444 5087.3.1.0 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C 0.55 44.0 3.19e-01 98.3% 95.7%
5082955 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 47.0 3.60e-01 100.0% 84.1%
1953031 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.55 48.0 3.46e-01 100.0% 93.7%
4363703 213.1.1.9 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › NMT_C 0.54 44.0 3.05e-01 96.6% 42.8%
3444588 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.54 45.0 2.84e-01 100.0% 17.5%
3587578 213.1.1.31 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.54 46.0 3.53e-01 100.0% 55.6%
3220428 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.54 46.0 3.27e-01 98.3% 80.0%
1716885 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.53 46.0 3.48e-01 100.0% 56.1%
3801954 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.53 42.0 2.68e-01 94.8% 74.6%
None — 0.53 47.0 3.40e-01 100.0% 55.8%
3164768 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.53 44.0 3.49e-01 100.0% 62.9%
4148988 213.1.1.91 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › NMT, NMT_C 0.53 45.0 2.67e-01 98.3% 22.5%
3636863 213.1.1.21 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C 0.53 44.0 3.07e-01 100.0% 37.7%
4015840 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.53 45.0 3.12e-01 100.0% 41.4%
3544000 213.1.1.34 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_13 0.53 44.0 3.20e-01 100.0% 58.9%
None — 0.52 44.0 3.26e-01 100.0% 56.9%
3395625 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.52 44.0 3.14e-01 100.0% 46.7%
3501354 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.52 41.0 2.80e-01 94.8% 23.9%
3525290 213.1.1.34 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_13 0.52 43.0 3.09e-01 98.3% 58.9%
11072 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.52 43.0 3.33e-01 100.0% 61.1%
3995982 3209.1.1.1 ↗ a+b two layers › RPL28 › RPL28 › RPL28 › Ribosomal_L28e 0.52 38.0 3.44e-01 84.5% 64.4%
3985036 213.1.1.64 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF535 0.52 43.0 2.89e-01 100.0% 22.4%
5065128 2484.1.1.6 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N 0.51 41.0 2.79e-01 94.8% 24.9%
3952307 213.1.1.31 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.51 42.0 3.23e-01 100.0% 55.5%
None — 0.51 43.0 3.14e-01 100.0% 45.1%
3373298 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.50 37.0 2.48e-01 79.3% 82.9%
4927763 213.1.1.29 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_9 0.50 41.0 3.13e-01 100.0% 52.4%
4960287 375.1.1.9 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom 0.50 34.0 3.03e-01 72.4% 51.1%
D2 medium residues 87-154
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kvpA00 6.20.140.10 Special › Other non-globular › Immunoglobulin-like › 0.66 38.0 4.59e-01 85.3% 90.7%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.60 35.0 3.74e-01 82.4% 66.7%
1qnaA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.60 35.0 3.21e-01 73.5% 40.9%
2cnqA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.60 43.0 3.44e-01 77.9% 97.9%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 41.0 3.69e-01 97.1% 50.0%
1orvA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.59 44.0 2.74e-01 83.8% 23.2%
1x9mA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.59 40.0 2.83e-01 72.1% 57.5%
1nnvA01 3.10.450.140 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative 0.58 45.0 4.02e-01 86.8% 74.0%
3wknF00 6.20.50.120 Special › Other non-globular › N-terminal domain of TfIIb › 0.58 36.0 4.20e-01 77.9% 93.5%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.57 40.0 4.45e-01 89.7% 100.0%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 4.05e-01 97.1% 70.1%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 39.0 4.26e-01 94.1% 96.2%
4kt3B00 3.10.450.170 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › type vi secretion system effector-immunity co pseudomonas protegens 0.56 43.0 3.58e-01 85.3% 46.9%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.55 39.0 4.22e-01 97.1% 98.1%
1aisA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.54 32.0 2.99e-01 73.5% 42.5%
4hsqA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 2.96e-01 72.1% 80.6%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 40.0 3.87e-01 97.1% 70.0%
1i78B00 2.40.128.90 Mainly Beta › Beta Barrel › Lipocalin › OMPT-like 0.54 44.0 2.96e-01 92.6% 36.6%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.54 43.0 3.47e-01 89.7% 48.2%
1adjB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.54 40.0 3.59e-01 79.4% 83.0%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 39.0 4.16e-01 98.5% 96.6%
4ienA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 42.0 3.28e-01 86.8% 67.5%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 42.0 4.12e-01 89.7% 84.2%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 37.0 3.28e-01 77.9% 76.1%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 38.0 3.98e-01 97.1% 93.4%
1oqwA00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.51 41.0 3.25e-01 88.2% 68.8%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 39.0 3.79e-01 97.1% 74.1%
1wxrA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.51 41.0 2.87e-01 92.6% 71.6%
2ch9A01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.57e-01 95.6% 81.4%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 35.0 3.88e-01 91.2% 100.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 36.0 3.54e-01 95.6% 72.6%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 36.0 3.62e-01 95.6% 75.3%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3722792 298.1.1.22 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Gal80p_C-like 0.63 44.0 3.09e-01 73.5% 84.2%
3366578 4.1.1.325 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.61 41.0 3.47e-01 97.1% 40.0%
3510576 331.1.1.1 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.61 35.0 3.36e-01 73.5% 47.5%
3198731 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.59 41.0 3.35e-01 97.1% 37.7%
3547102 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 41.0 3.88e-01 97.1% 58.8%
3547093 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 40.0 3.75e-01 97.1% 55.6%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 39.0 3.73e-01 97.1% 56.5%
3258701 192.8.1.295 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Spindle_Spc25 0.58 42.0 2.93e-01 86.8% 23.6%
3501699 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 40.0 3.86e-01 97.1% 62.5%
4963650 4.1.1.488 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7346 0.57 38.0 4.13e-01 91.2% 85.5%
3819340 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.57 42.0 3.56e-01 97.1% 45.8%
3398093 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.56 38.0 3.96e-01 97.1% 80.0%
3240406 4.1.1.347 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.56 38.0 3.31e-01 97.1% 42.6%
3302817 4.1.1.362 ↗ beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 0.55 38.0 3.35e-01 95.6% 45.9%
4881743 5.1.2.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DPPIV_N 0.55 41.0 2.51e-01 86.8% 11.8%
3393358 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.55 40.0 3.67e-01 95.6% 57.9%
3698757 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 44.0 4.01e-01 95.6% 77.0%
4011354 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 42.0 2.73e-01 88.2% 86.0%
3166727 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 41.0 3.40e-01 89.7% 74.5%
3503689 331.1.1.1 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.54 37.0 3.21e-01 73.5% 47.3%
3857561 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.53 43.0 3.19e-01 88.2% 58.3%
3575199 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 41.0 3.62e-01 97.1% 57.1%
3497371 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.52 41.0 3.10e-01 88.2% 94.9%
4026705 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.52 41.0 3.08e-01 88.2% 56.5%
4049824 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.52 36.0 3.15e-01 92.6% 44.3%
5013867 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 36.0 3.38e-01 77.9% 58.8%
4000280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 37.0 3.88e-01 97.1% 96.4%
3501741 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.51 39.0 4.11e-01 86.8% 100.0%
3707929 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 41.0 3.29e-01 97.1% 44.4%
5036533 3435.1.1.0 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.51 35.0 2.56e-01 73.5% 32.4%
3308036 5.1.3.235 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_2, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.51 41.0 2.67e-01 95.6% 71.4%
3281618 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.50 43.0 3.81e-01 97.1% 78.0%
3230083 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.50 36.0 3.38e-01 95.6% 58.9%
4942805 4.1.1.301 ↗ beta barrels › SH3 › SH3 › SH3 › MJ1316 0.50 42.0 3.98e-01 98.5% 87.1%
5046117 4018.1.1.2 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.50 39.0 3.14e-01 86.8% 92.4%