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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00341

Bact-Vir

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00341

Identity

Kingdom:
phage

Quality

92.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-88_124-141
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dqwA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.54 41.0 3.73e-01 82.7% 95.6%
3ddjA02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.53 43.0 3.58e-01 88.9% 86.7%
4h15A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 39.0 2.82e-01 80.2% 92.7%
7uinD01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.53 39.0 3.18e-01 81.5% 92.2%
3i8nB00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.53 42.0 3.66e-01 87.7% 92.9%
1bd3A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 37.0 2.75e-01 74.1% 85.7%
1k6jB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 39.0 2.97e-01 81.5% 88.1%
3c3pA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 37.0 2.81e-01 76.5% 97.5%
4uhcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 35.0 2.49e-01 70.4% 83.8%
2p9mB00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.51 41.0 3.57e-01 88.9% 92.2%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3592478 237.1.1.0 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.75 68.0 5.03e-01 100.0% 52.2%
3703284 237.1.1.0 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.74 66.0 5.08e-01 100.0% 53.5%
4029976 237.1.1.0 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.68 61.0 4.88e-01 100.0% 60.0%
4606942 281.1.1.1 a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II 0.64 51.0 3.76e-01 86.4% 73.0%
4366425 281.1.1.1 a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II 0.63 50.0 3.53e-01 86.4% 78.5%
4994262 281.1.1.1 a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II 0.61 50.0 3.70e-01 87.7% 79.5%
5068258 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.54 43.0 3.67e-01 87.7% 88.9%
3620960 2008.1.1.147 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF29557 0.54 40.0 2.54e-01 77.8% 65.5%
5008313 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.53 43.0 3.71e-01 88.9% 93.6%
3478354 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.52 43.0 2.84e-01 100.0% 98.2%