←Back to structures
S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00355
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00355
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-42_62-100_158-193
Domain cluster:
rep: CAKLQF020000004.1__CAH1076681.1__SAMEA5780031_00906__00004__D12-105_139-194
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13640.13 best | 2OG-FeII_Oxy_3 | 27.7 | 6.00e-06 | 65.0% | 42.9% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4j25F00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.89 | 82.0 | 6.85e-01 | 97.4% | 100.0% |
| 7u6iA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.80 | 73.0 | 5.72e-01 | 100.0% | 90.8% |
| 4xaaA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.76 | 68.0 | 5.48e-01 | 97.4% | 95.5% |
| 5ep9D00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.76 | 68.0 | 5.36e-01 | 98.3% | 83.9% |
| 2opwA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.74 | 68.0 | 5.05e-01 | 99.1% | 91.3% |
| 4qkbA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.69 | 58.0 | 4.96e-01 | 90.6% | 94.7% |
| 3qh6A00 | 3.10.129.150 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Domain of unknown function (DUF5070) | 0.67 | 61.0 | 5.78e-01 | 100.0% | 97.9% |
| 4uhiA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 46.0 | 3.14e-01 | 95.7% | 73.8% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 29.0 | 3.51e-01 | 95.7% | 84.9% |
| 5zzjA02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 43.0 | 3.23e-01 | 90.6% | 68.1% |
| 2xseA00 | 1.20.120.1440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › JBP1, DNA-binding domain | 0.51 | 42.0 | 3.81e-01 | 89.7% | 83.0% |
| 5aj3F00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.50 | 29.0 | 2.86e-01 | 88.9% | 52.8% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3967379 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.89 | 85.0 | 6.77e-01 | 100.0% | 93.8% |
| 3510594 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.87 | 82.0 | 6.35e-01 | 100.0% | 87.2% |
| 3414751 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.86 | 81.0 | 6.14e-01 | 100.0% | 87.5% |
| 4025839 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.86 | 81.0 | 6.26e-01 | 100.0% | 95.7% |
| 2393233 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.85 | 80.0 | 6.34e-01 | 100.0% | 91.8% |
| 1879072 | 10.12.1.25 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PhyH | 0.76 | 69.0 | 5.31e-01 | 98.3% | 82.1% |
| 4085340 | 10.12.1.25 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PhyH | 0.74 | 66.0 | 4.98e-01 | 97.4% | 81.8% |
| 3267463 | 605.6.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like | 0.54 | 38.0 | 4.10e-01 | 75.2% | 85.0% |
| 3723478 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.52 | 43.0 | 3.87e-01 | 94.9% | 62.4% |
D2
medium
residues 101-157
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13661.13 best | 2OG-FeII_Oxy_4 | 33.5 | 7.10e-08 | 96.5% | 49.0% |
| PF13640.13 | 2OG-FeII_Oxy_3 | 37.1 | 6.90e-09 | 94.7% | 51.0% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3f1yA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.50 | 38.0 | 2.49e-01 | 87.7% | 16.7% |