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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00377
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00377
Identity
- Kingdom:
- phage
Quality
72.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 72-180
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.73 | 46.0 | 5.03e-01 | 100.0% | 78.2% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 41.0 | 4.81e-01 | 84.4% | 85.5% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.65 | 29.0 | 3.80e-01 | 70.6% | 75.0% |
| 2pwwA00 | 3.30.310.100 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YugN-like | 0.65 | 46.0 | 4.52e-01 | 99.1% | 68.7% |
| 3fljA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 44.0 | 4.03e-01 | 98.2% | 53.2% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 43.0 | 4.04e-01 | 98.2% | 56.8% |
| 2lyxA00 | 3.10.450.390 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 | 0.62 | 40.0 | 4.41e-01 | 84.4% | 81.6% |
| 4orlA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 43.0 | 4.29e-01 | 97.2% | 70.9% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 39.0 | 3.88e-01 | 98.2% | 62.2% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.61 | 30.0 | 3.72e-01 | 71.6% | 77.8% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 41.0 | 4.08e-01 | 97.2% | 67.0% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.59 | 39.0 | 3.62e-01 | 96.3% | 52.1% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.58 | 38.0 | 3.96e-01 | 84.4% | 71.7% |
| 4n6tA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 37.0 | 4.31e-01 | 84.4% | 89.9% |
| 1wnhA02 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 38.0 | 3.69e-01 | 84.4% | 62.5% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 38.0 | 3.73e-01 | 100.0% | 64.2% |
| 4ggtB00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.54 | 38.0 | 3.92e-01 | 83.5% | 75.5% |
| 2drhB00 | 3.60.70.12 | Alpha Beta › 4-Layer Sandwich › L-amino peptidase D-ALA esterase/amidase › L-amino peptidase D-ALA esterase/amidase | 0.53 | 38.0 | 2.71e-01 | 73.4% | 97.5% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.52 | 41.0 | 3.99e-01 | 84.4% | 81.3% |
| 6f90A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 45.0 | 3.43e-01 | 100.0% | 75.6% |
| 2qguA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 4.18e-01 | 84.4% | 96.0% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.50 | 33.0 | 3.61e-01 | 84.4% | 80.9% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3453774 | 9.23.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › PAP_fibrillin | 0.67 | 43.0 | 3.65e-01 | 81.7% | 41.4% |
| 4983588 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.65 | 34.0 | 4.03e-01 | 83.5% | 73.3% |
| 4031483 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 50.0 | 5.43e-01 | 96.3% | 100.0% |
| 4977517 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.62 | 33.0 | 3.90e-01 | 83.5% | 74.7% |
| 3427875 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.61 | 44.0 | 3.92e-01 | 85.3% | 52.3% |
| 4978676 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.61 | 31.0 | 3.58e-01 | 77.1% | 66.3% |
| 1810786 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.61 | 32.0 | 3.79e-01 | 82.6% | 74.3% |
| 3744012 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.60 | 40.0 | 2.74e-01 | 90.8% | 20.3% |
| 3724270 | 243.1.1.78 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26534 | 0.59 | 42.0 | 3.74e-01 | 100.0% | 50.3% |
| 3737742 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.59 | 36.0 | 3.60e-01 | 82.6% | 60.6% |
| 1201179 | 298.1.1.15 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Sacchrp_dh_C | 0.58 | 45.0 | 3.53e-01 | 84.4% | 98.4% |
| 3241827 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.56 | 38.0 | 3.72e-01 | 97.2% | 61.3% |
| 2605238 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.56 | 37.0 | 3.78e-01 | 97.2% | 68.2% |
| 4666593 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.56 | 39.0 | 3.41e-01 | 71.6% | 72.3% |
| 4497101 | 4312.2.1.0 ↗ | a+b two layers › RelE-like › YaeB-like › YaeB-like | 0.55 | 39.0 | 4.26e-01 | 84.4% | 92.1% |
| 4954331 | 298.2.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › FwdE-like › FwdE-like | 0.54 | 42.0 | 3.77e-01 | 84.4% | 70.0% |
| 3279607 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.54 | 39.0 | 4.11e-01 | 83.5% | 82.0% |
| 3932732 | 5.1.4.277 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EIPR1 | 0.54 | 37.0 | 2.63e-01 | 70.6% | 30.8% |
| 3981106 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.53 | 38.0 | 3.46e-01 | 99.1% | 54.0% |
| 5069317 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.53 | 37.0 | 2.51e-01 | 73.4% | 23.5% |
| 4050475 | 331.9.1.1 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Alpha_adaptin_C | 0.52 | 43.0 | 4.17e-01 | 98.2% | 78.0% |
| 3711120 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 41.0 | 3.79e-01 | 84.4% | 92.9% |
| 3723379 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.52 | 40.0 | 3.50e-01 | 83.5% | 83.5% |
| 3725129 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.52 | 36.0 | 3.26e-01 | 72.5% | 89.7% |
| 4954283 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.52 | 41.0 | 3.70e-01 | 95.4% | 62.0% |
| 4524129 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.51 | 38.0 | 4.03e-01 | 84.4% | 89.5% |
| 3715587 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 38.0 | 3.71e-01 | 97.2% | 71.7% |
| 184879 | 243.1.1.8 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MlaC | 0.50 | 40.0 | 3.38e-01 | 84.4% | 77.7% |
| 3962603 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.50 | 36.0 | 3.61e-01 | 96.3% | 74.5% |