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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00379
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00379
Identity
- Kingdom:
- phage
Quality
67.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-150
D2
medium
residues 191-283
D3
medium
residues 284-365
D4
medium
residues 366-472
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b48A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 45.0 | 4.48e-01 | 79.4% | 92.7% |
| 3wd6A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 42.0 | 4.14e-01 | 77.6% | 79.7% |
| 2xppA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.57 | 47.0 | 4.40e-01 | 93.5% | 83.9% |
| 2b6cA01 | 1.20.1660.10 | Mainly Alpha › Up-down Bundle › ARM repeat fold › Hypothetical protein (EF3068) | 0.56 | 41.0 | 4.09e-01 | 79.4% | 98.3% |
| 2xevB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 44.0 | 4.28e-01 | 93.5% | 76.6% |
| 1qazA00 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.54 | 46.0 | 3.31e-01 | 97.2% | 57.0% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 40.0 | 3.94e-01 | 82.2% | 93.8% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.51 | 31.0 | 3.19e-01 | 80.4% | 61.0% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 29.0 | 3.29e-01 | 78.5% | 75.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3519038 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 48.0 | 4.35e-01 | 82.2% | 84.1% |
| 4871777 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.57 | 40.0 | 3.62e-01 | 72.0% | 77.2% |
| 3453221 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.57 | 43.0 | 3.55e-01 | 81.3% | 42.4% |
| 59240 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.53 | 46.0 | 3.32e-01 | 100.0% | 44.2% |