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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00386
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00386
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-53
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 44.0 | 4.02e-01 | 93.5% | 44.4% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 43.0 | 4.02e-01 | 93.5% | 48.3% |
| 4wcgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 41.0 | 3.83e-01 | 93.5% | 45.9% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 41.0 | 4.13e-01 | 97.8% | 60.4% |
| 2ddhA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.62 | 52.0 | 3.93e-01 | 95.7% | 37.3% |
| 3rfwA01 | 1.10.8.1040 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 50.0 | 4.58e-01 | 100.0% | 77.0% |
| 5j1hA01 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 41.0 | 2.88e-01 | 82.6% | 22.0% |
| 1wrdA00 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 41.0 | 3.36e-01 | 82.6% | 41.8% |
| 1s4eG02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.56 | 42.0 | 3.00e-01 | 87.0% | 47.1% |
| 2o7tA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 42.0 | 2.91e-01 | 91.3% | 32.4% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.52 | 38.0 | 3.37e-01 | 78.3% | 56.3% |
| 3r6nA02 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 38.0 | 2.81e-01 | 84.8% | 26.5% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 40.0 | 3.80e-01 | 93.5% | 72.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3250046 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 35.0 | 2.84e-01 | 76.1% | 31.2% |
| 5067549 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 39.0 | 3.45e-01 | 89.1% | 44.6% |
| 3261464 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.60 | 44.0 | 3.45e-01 | 82.6% | 40.9% |
| 4235730 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.59 | 43.0 | 3.99e-01 | 97.8% | 60.0% |
| 3813837 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.57 | 43.0 | 3.84e-01 | 91.3% | 64.0% |
| 3510977 | 103.1.1.95 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28512 | 0.56 | 38.0 | 3.88e-01 | 97.8% | 73.3% |
| 143220 | 603.1.1.8 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Spectrin_2 | 0.56 | 40.0 | 3.53e-01 | 82.6% | 51.2% |
| 3782008 | 101.1.17.19 ↗ | alpha arrays › HTH › HTH › FF domain › DEK_C | 0.56 | 45.0 | 4.08e-01 | 97.8% | 64.6% |
| 4149728 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.54 | 43.0 | 3.80e-01 | 100.0% | 57.5% |
D2
high
residues 68-331
Domain cluster:
rep: putative_alpha_beta_hydrolase__YP_003987040__Acanthamoeba_polyphaga_mimivirus__212035__D58-340
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07859.20 best | Abhydrolase_3 | 240.3 | 2.60e-71 | 79.2% | 99.5% |
| PF20434.6 | BD-FAE | 69.0 | 5.80e-19 | 72.0% | 50.7% |
| PF00135.35 | COesterase | 46.4 | 4.20e-12 | 46.6% | 22.7% |