←Back to structures

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00450

Bact-Vir

S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00450

Identity

Kingdom:
phage

Quality

64.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-14_30-73_96-137
PDB
D2 medium residues 269-456
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4flbA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 44.0 5.03e-01 82.4% 100.0%
1lshA02 1.25.10.20 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Vitellinogen, superhelical 0.61 56.0 4.62e-01 100.0% 63.3%
3grlA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.61 55.0 3.91e-01 100.0% 60.6%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 47.0 4.74e-01 79.8% 86.6%
1g3jC00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.59 54.0 4.14e-01 100.0% 63.8%
3ltjA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.59 44.0 4.43e-01 96.3% 75.4%
2i2oA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 49.0 4.79e-01 92.6% 93.4%
7zb5E01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.58 52.0 4.52e-01 100.0% 97.6%
4d49A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.56 51.0 4.73e-01 100.0% 92.0%
3au4A01 1.25.40.530 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain 0.56 39.0 3.86e-01 83.0% 66.3%
4ks9A01 1.20.140.90 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain 0.56 35.0 4.15e-01 80.3% 92.9%
1zu2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 39.0 4.17e-01 92.6% 89.9%
3tt9A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.53 47.0 4.45e-01 100.0% 95.3%
1h2tC03 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 45.0 4.20e-01 95.2% 80.2%
3wozB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.52 44.0 4.20e-01 94.1% 80.8%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4951788 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 58.0 5.19e-01 96.8% 69.6%
4026089 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 56.0 5.04e-01 99.5% 81.8%
3841137 109.4.1.662 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MEKK4_N 0.58 44.0 4.18e-01 78.7% 95.0%
4496191 109.4.1.317 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med5 0.56 45.0 4.80e-01 85.6% 96.4%
3250575 109.4.1.33 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT 0.52 44.0 4.29e-01 95.2% 82.9%
3174254 109.4.1.58 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Not1 0.52 46.0 4.31e-01 98.4% 78.8%
4017940 109.4.1.1969 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_4, TPR_10, TPR_12 0.51 45.0 4.35e-01 96.3% 86.2%
3958817 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 40.0 3.84e-01 83.5% 81.8%
D3 medium residues 457-569
PDB