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S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00485
Bact-VirS2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00485
Identity
- Kingdom:
- phage
Quality
67.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-196
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lgyA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.83 | 78.0 | 6.84e-01 | 97.9% | 93.2% |
| 1uswA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.81 | 76.0 | 6.74e-01 | 97.9% | 92.3% |
| 3uueA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.81 | 76.0 | 6.58e-01 | 99.0% | 92.5% |
| 3g7nB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.80 | 75.0 | 6.73e-01 | 98.4% | 93.0% |
| 4zi5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.68 | 58.0 | 5.39e-01 | 89.6% | 94.6% |
| 1l7aA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.66 | 58.0 | 4.84e-01 | 92.2% | 82.1% |
| 3azoA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.65 | 56.0 | 4.87e-01 | 90.1% | 89.8% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 18.0 | 3.14e-01 | 96.9% | 69.7% |
| 3fcyA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.65 | 57.0 | 4.76e-01 | 92.7% | 83.3% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 17.0 | 2.71e-01 | 95.3% | 55.4% |
| 1fj2A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 56.0 | 5.30e-01 | 97.4% | 86.0% |
| 1jfrA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 57.0 | 5.13e-01 | 99.5% | 91.5% |
| 4fleA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 51.0 | 5.14e-01 | 97.4% | 91.8% |
| 3hqxA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 30.0 | 4.05e-01 | 94.8% | 94.3% |
| 4ix3A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 26.0 | 3.24e-01 | 97.4% | 69.9% |
| 4b08A01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 23.0 | 3.49e-01 | 95.3% | 90.1% |
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.53 | 20.0 | 3.10e-01 | 93.2% | 82.9% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 22.0 | 2.81e-01 | 70.8% | 62.5% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 23.0 | 3.39e-01 | 96.9% | 96.0% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 20.0 | 2.70e-01 | 88.0% | 63.9% |
| 2z2xA00 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.51 | 46.0 | 3.97e-01 | 100.0% | 92.5% |
| 2jjdF02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.50 | 40.0 | 3.60e-01 | 82.8% | 73.7% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4612393 | 7579.1.1.234 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF6792 | 0.87 | 76.0 | 6.66e-01 | 90.1% | 98.5% |
| 3248853 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.87 | 83.0 | 6.99e-01 | 100.0% | 92.0% |
| 4624289 | 7579.1.1.167 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PF26363 | 0.86 | 83.0 | 7.56e-01 | 100.0% | 92.6% |
| 3717071 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.85 | 82.0 | 6.44e-01 | 100.0% | 68.2% |
| 3704674 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.84 | 81.0 | 6.37e-01 | 100.0% | 76.4% |
| 3615725 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.83 | 80.0 | 7.47e-01 | 100.0% | 96.5% |
| 3594446 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.82 | 79.0 | 6.93e-01 | 100.0% | 88.3% |
| 3597723 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.82 | 79.0 | 6.69e-01 | 100.0% | 82.4% |
| 2122952 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.82 | 78.0 | 6.68e-01 | 100.0% | 91.6% |
| 4033266 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.81 | 77.0 | 6.81e-01 | 100.0% | 93.6% |
| 4257086 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.81 | 76.0 | 6.67e-01 | 97.9% | 90.6% |
| None | — | 0.81 | 76.0 | 6.60e-01 | 99.0% | 93.1% | |
| 3615181 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.80 | 75.0 | 6.92e-01 | 100.0% | 80.0% |
| 138233 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.78 | 74.0 | 6.60e-01 | 98.4% | 92.5% |
| 4210421 | 7579.1.1.167 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PF26363 | 0.78 | 75.0 | 5.69e-01 | 100.0% | 66.4% |
| 4417180 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.78 | 75.0 | 5.70e-01 | 100.0% | 67.0% |
| 4049808 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.78 | 75.0 | 5.53e-01 | 100.0% | 61.6% |
| 4873527 | 7579.1.1.13 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DLH | 0.70 | 60.0 | 5.56e-01 | 90.1% | 94.6% |
| 4319175 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.68 | 23.0 | 3.97e-01 | 75.0% | 90.8% |
| 3933293 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.67 | 17.0 | 3.16e-01 | 95.3% | 70.7% |
| 3507420 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 21.0 | 2.97e-01 | 85.4% | 56.8% |
| 3665072 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.64 | 57.0 | 4.72e-01 | 94.8% | 87.2% |
| 3983740 | 7579.1.1.29 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › UPF0227 | 0.61 | 52.0 | 5.32e-01 | 99.0% | 94.0% |
| 2600564 | 7579.1.1.29 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › UPF0227 | 0.58 | 51.0 | 5.14e-01 | 97.4% | 91.8% |
| 4029225 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.58 | 53.0 | 4.21e-01 | 100.0% | 99.0% |
| 4326866 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.57 | 49.0 | 4.35e-01 | 93.2% | 88.2% |
| 3826195 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.53 | 22.0 | 3.05e-01 | 95.3% | 73.0% |
| 3923839 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 21.0 | 3.18e-01 | 96.9% | 94.3% |
| 5064060 | 896.1.1.4 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › DDE_Tnp_IS66 | 0.52 | 17.0 | 2.90e-01 | 96.9% | 81.4% |
| 4927935 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 21.0 | 3.32e-01 | 96.9% | 96.0% |
| 3699353 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.51 | 40.0 | 3.37e-01 | 82.3% | 60.3% |
| 5025207 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 22.0 | 3.36e-01 | 96.9% | 96.5% |
| 3661180 | 2.1.1.223 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 | 0.50 | 23.0 | 3.08e-01 | 95.3% | 81.0% |